Detail Information of Epigenetic Regulations
General Information of Drug Transporter (DT) | |||||
---|---|---|---|---|---|
DT ID | DTD0009 Transporter Info | ||||
Gene Name | SLC22A3 | ||||
Transporter Name | Organic cation transporter 3 | ||||
Gene ID | |||||
UniProt ID | |||||
Epigenetic Regulations of This DT (EGR) | |||||
---|---|---|---|---|---|
Methylation |
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Prostate cancer |
15 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of SLC22A3 in prostate cancer | [ 1 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Related Molecular Changes |
Down regulation of SLC22A3 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Frequency |
62% of the studied tumor samples | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
Aberrant methylation contributes to the reduced expression of OCT3 in prostate cancer. | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
TSS1500 (cg19936194) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.82E+00 | Statistic Test | p-value: 1.10E-04; Z-score: 8.72E+00 | ||
Methylation in Case |
1.29E-01 (Median) | Methylation in Control | 7.08E-02 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
TSS1500 (cg27520549) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.12E+00 | Statistic Test | p-value: 2.31E-02; Z-score: 1.66E+00 | ||
Methylation in Case |
9.17E-01 (Median) | Methylation in Control | 8.20E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
TSS200 (cg07589968) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.41E+00 | Statistic Test | p-value: 7.97E-03; Z-score: 7.46E+00 | ||
Methylation in Case |
6.61E-01 (Median) | Methylation in Control | 4.68E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
1stExon (cg06987672) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.00E+00 | Statistic Test | p-value: 2.23E-02; Z-score: 8.99E+00 | ||
Methylation in Case |
1.78E-01 (Median) | Methylation in Control | 8.89E-02 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
1stExon (cg09840840) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.45E+00 | Statistic Test | p-value: 4.68E-02; Z-score: -2.18E+00 | ||
Methylation in Case |
5.05E-02 (Median) | Methylation in Control | 7.30E-02 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
Body (cg03816707) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.12E+00 | Statistic Test | p-value: 2.57E-03; Z-score: 3.88E+00 | ||
Methylation in Case |
5.43E-01 (Median) | Methylation in Control | 2.57E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
Body (cg03924551) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.24E+00 | Statistic Test | p-value: 3.15E-03; Z-score: 2.84E+00 | ||
Methylation in Case |
8.75E-01 (Median) | Methylation in Control | 7.08E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
Body (cg02114341) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.13E+00 | Statistic Test | p-value: 3.96E-03; Z-score: 3.03E+00 | ||
Methylation in Case |
9.10E-01 (Median) | Methylation in Control | 8.04E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
Body (cg12619347) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.27E+00 | Statistic Test | p-value: 9.34E-03; Z-score: -3.31E+00 | ||
Methylation in Case |
6.03E-01 (Median) | Methylation in Control | 7.68E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
Body (cg01432055) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.04E+00 | Statistic Test | p-value: 9.92E-03; Z-score: 2.59E+00 | ||
Methylation in Case |
9.52E-01 (Median) | Methylation in Control | 9.18E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 12 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
Body (cg09790270) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.36E+00 | Statistic Test | p-value: 2.57E-02; Z-score: 2.30E+00 | ||
Methylation in Case |
7.07E-01 (Median) | Methylation in Control | 5.19E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 13 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
Body (cg10125193) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.07E+00 | Statistic Test | p-value: 3.83E-02; Z-score: 1.93E+00 | ||
Methylation in Case |
9.09E-01 (Median) | Methylation in Control | 8.51E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 14 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
Body (cg20083442) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.48E+00 | Statistic Test | p-value: 3.92E-02; Z-score: -3.02E+00 | ||
Methylation in Case |
4.19E-01 (Median) | Methylation in Control | 6.17E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 15 |
Methylation of SLC22A3 in prostate cancer | [ 13 ] | |||
Location |
Body (cg22077670) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.27E+00 | Statistic Test | p-value: 4.81E-02; Z-score: 1.81E+00 | ||
Methylation in Case |
8.28E-01 (Median) | Methylation in Control | 6.55E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Diabetes |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of SLC22A3 in diabetes | [ 2 ] | |||
Location |
Promoter (5 CpG sites) | ||||
Epigenetic Type |
Methylation | Experiment Method | HumanMethylation450 BeadChip | ||
Related Molecular Changes |
Down regulation of SLC22A3 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Diabetes [ ICD-11: 5A10-5A14] | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
Higher methylation in a CpG site located in SLC22A3 was associated with lower expression in the human liver and also with insulin plus metformin therapy, higher glucose levels, and BMI. | ||||
Esophageal squamous cell carcinoma |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of SLC22A3 in esophageal squamous cell carcinoma | [ 3 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Related Molecular Changes |
Down regulation of SLC22A3 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Esophageal squamous cell carcinoma [ ICD-11: 2E60.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
SLC22A3 promoter Hypermethylation may directly suppresses its gene transcription, resulting in increased susceptibility to ESCC in high-risk individuals. | ||||
Pancretic ductal adenocarcinoma |
10 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in pancretic ductal adenocarcinoma | [ 4 ] | |||
Location |
5'UTR (cg27403989) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.14E+00 | Statistic Test | p-value: 1.51E-05; Z-score: -1.23E+00 | ||
Methylation in Case |
7.10E-01 (Median) | Methylation in Control | 8.11E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in pancretic ductal adenocarcinoma | [ 4 ] | |||
Location |
5'UTR (cg07007420) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 2.87E-04; Z-score: -4.82E-01 | ||
Methylation in Case |
8.93E-01 (Median) | Methylation in Control | 9.03E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in pancretic ductal adenocarcinoma | [ 4 ] | |||
Location |
TSS1500 (cg13875111) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.20E+00 | Statistic Test | p-value: 3.67E-02; Z-score: -6.99E-01 | ||
Methylation in Case |
1.48E-01 (Median) | Methylation in Control | 1.78E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in pancretic ductal adenocarcinoma | [ 4 ] | |||
Location |
TSS200 (cg04431946) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.39E+00 | Statistic Test | p-value: 2.19E-31; Z-score: 5.00E+00 | ||
Methylation in Case |
5.04E-01 (Median) | Methylation in Control | 2.11E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in pancretic ductal adenocarcinoma | [ 4 ] | |||
Location |
TSS200 (cg17920479) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.39E+00 | Statistic Test | p-value: 3.81E-18; Z-score: 2.96E+00 | ||
Methylation in Case |
4.49E-01 (Median) | Methylation in Control | 3.22E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A3 in pancretic ductal adenocarcinoma | [ 4 ] | |||
Location |
TSS200 (cg18313899) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.72E+00 | Statistic Test | p-value: 7.48E-17; Z-score: 3.10E+00 | ||
Methylation in Case |
2.60E-01 (Median) | Methylation in Control | 1.51E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC22A3 in pancretic ductal adenocarcinoma | [ 4 ] | |||
Location |
Body (cg27315497) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.25E+00 | Statistic Test | p-value: 1.32E-11; Z-score: 2.34E+00 | ||
Methylation in Case |
5.50E-01 (Median) | Methylation in Control | 4.41E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC22A3 in pancretic ductal adenocarcinoma | [ 4 ] | |||
Location |
Body (cg09359103) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.44E+00 | Statistic Test | p-value: 3.74E-10; Z-score: -1.71E+00 | ||
Methylation in Case |
3.31E-01 (Median) | Methylation in Control | 4.76E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC22A3 in pancretic ductal adenocarcinoma | [ 4 ] | |||
Location |
Body (cg04860674) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.03E+00 | Statistic Test | p-value: 5.68E-09; Z-score: -9.67E-01 | ||
Methylation in Case |
8.47E-01 (Median) | Methylation in Control | 8.74E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of SLC22A3 in pancretic ductal adenocarcinoma | [ 4 ] | |||
Location |
Body (cg04036777) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.16E+00 | Statistic Test | p-value: 3.60E-03; Z-score: -6.49E-01 | ||
Methylation in Case |
4.40E-01 (Median) | Methylation in Control | 5.12E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Bladder cancer |
13 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
TSS1500 (cg25313204) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.32E+00 | Statistic Test | p-value: 1.83E-03; Z-score: -2.09E+00 | ||
Methylation in Case |
4.05E-01 (Median) | Methylation in Control | 5.35E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
TSS1500 (cg22117918) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.27E+00 | Statistic Test | p-value: 3.83E-02; Z-score: 1.40E+00 | ||
Methylation in Case |
2.03E-01 (Median) | Methylation in Control | 1.60E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
Body (cg23898998) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.46E+00 | Statistic Test | p-value: 2.00E-07; Z-score: -1.15E+01 | ||
Methylation in Case |
4.58E-01 (Median) | Methylation in Control | 6.68E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
Body (cg09226986) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.69E+00 | Statistic Test | p-value: 3.02E-05; Z-score: 5.16E+00 | ||
Methylation in Case |
7.96E-01 (Median) | Methylation in Control | 4.72E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
Body (cg04794858) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.16E+00 | Statistic Test | p-value: 2.64E-04; Z-score: -5.28E+00 | ||
Methylation in Case |
7.45E-01 (Median) | Methylation in Control | 8.67E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
Body (cg13280882) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.07E+00 | Statistic Test | p-value: 1.33E-03; Z-score: -1.96E+00 | ||
Methylation in Case |
8.01E-01 (Median) | Methylation in Control | 8.60E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
Body (cg01923312) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.22E+00 | Statistic Test | p-value: 1.79E-03; Z-score: -3.77E+00 | ||
Methylation in Case |
6.32E-01 (Median) | Methylation in Control | 7.70E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
Body (cg15363979) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 5.22E-03; Z-score: -3.02E+00 | ||
Methylation in Case |
8.95E-01 (Median) | Methylation in Control | 9.16E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
Body (cg24358785) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.19E+00 | Statistic Test | p-value: 7.04E-03; Z-score: 3.45E+00 | ||
Methylation in Case |
6.73E-01 (Median) | Methylation in Control | 5.67E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
Body (cg06295784) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.09E+00 | Statistic Test | p-value: 1.23E-02; Z-score: -1.89E+00 | ||
Methylation in Case |
6.17E-01 (Median) | Methylation in Control | 6.75E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
Body (cg14255768) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.03E+00 | Statistic Test | p-value: 3.15E-02; Z-score: -6.38E-01 | ||
Methylation in Case |
5.07E-01 (Median) | Methylation in Control | 5.23E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 12 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
Body (cg17768600) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.14E+00 | Statistic Test | p-value: 4.23E-02; Z-score: 1.81E+00 | ||
Methylation in Case |
7.28E-01 (Median) | Methylation in Control | 6.41E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 13 |
Methylation of SLC22A3 in bladder cancer | [ 5 ] | |||
Location |
3'UTR (cg00321824) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.41E+00 | Statistic Test | p-value: 9.40E-08; Z-score: -1.35E+01 | ||
Methylation in Case |
5.70E-01 (Median) | Methylation in Control | 8.03E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Breast cancer |
22 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
TSS1500 (cg22117918) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.26E+00 | Statistic Test | p-value: 6.87E-09; Z-score: 1.49E+00 | ||
Methylation in Case |
2.80E-01 (Median) | Methylation in Control | 2.22E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
TSS1500 (cg07883823) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.32E+00 | Statistic Test | p-value: 8.44E-08; Z-score: 1.48E+00 | ||
Methylation in Case |
3.14E-01 (Median) | Methylation in Control | 2.37E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
TSS1500 (cg21110739) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.05E+00 | Statistic Test | p-value: 2.79E-07; Z-score: -1.26E+00 | ||
Methylation in Case |
7.68E-01 (Median) | Methylation in Control | 8.07E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
TSS1500 (cg25313204) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.08E+00 | Statistic Test | p-value: 2.50E-03; Z-score: -7.53E-01 | ||
Methylation in Case |
5.95E-01 (Median) | Methylation in Control | 6.44E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
TSS200 (cg17364114) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.41E+00 | Statistic Test | p-value: 3.71E-08; Z-score: 1.16E+00 | ||
Methylation in Case |
1.44E-01 (Median) | Methylation in Control | 5.98E-02 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
1stExon (cg07237939) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.63E+00 | Statistic Test | p-value: 2.56E-10; Z-score: 1.90E+00 | ||
Methylation in Case |
1.07E-01 (Median) | Methylation in Control | 4.05E-02 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg23898998) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.50E+00 | Statistic Test | p-value: 2.93E-24; Z-score: -5.02E+00 | ||
Methylation in Case |
4.70E-01 (Median) | Methylation in Control | 7.03E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg15020894) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.55E+00 | Statistic Test | p-value: 4.72E-22; Z-score: -3.09E+00 | ||
Methylation in Case |
3.70E-01 (Median) | Methylation in Control | 5.74E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg04794858) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.37E+00 | Statistic Test | p-value: 5.42E-20; Z-score: -6.89E+00 | ||
Methylation in Case |
6.27E-01 (Median) | Methylation in Control | 8.60E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg15363979) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.10E+00 | Statistic Test | p-value: 1.53E-14; Z-score: -3.09E+00 | ||
Methylation in Case |
8.14E-01 (Median) | Methylation in Control | 9.00E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg09226986) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.61E+00 | Statistic Test | p-value: 3.47E-14; Z-score: 2.89E+00 | ||
Methylation in Case |
5.65E-01 (Median) | Methylation in Control | 3.51E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 12 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg13280882) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.14E+00 | Statistic Test | p-value: 7.63E-11; Z-score: -2.96E+00 | ||
Methylation in Case |
7.44E-01 (Median) | Methylation in Control | 8.44E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 13 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg02042585) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.17E+00 | Statistic Test | p-value: 1.04E-10; Z-score: -1.73E+00 | ||
Methylation in Case |
6.36E-01 (Median) | Methylation in Control | 7.46E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 14 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg17768600) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.18E+00 | Statistic Test | p-value: 8.44E-09; Z-score: -1.60E+00 | ||
Methylation in Case |
5.70E-01 (Median) | Methylation in Control | 6.70E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 15 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg14255768) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.43E+00 | Statistic Test | p-value: 2.97E-08; Z-score: -1.87E+00 | ||
Methylation in Case |
3.72E-01 (Median) | Methylation in Control | 5.31E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 16 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg19149031) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.13E+00 | Statistic Test | p-value: 3.69E-07; Z-score: -1.32E+00 | ||
Methylation in Case |
7.54E-01 (Median) | Methylation in Control | 8.50E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 17 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg18126027) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.08E+00 | Statistic Test | p-value: 2.74E-06; Z-score: -1.25E+00 | ||
Methylation in Case |
8.08E-01 (Median) | Methylation in Control | 8.72E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 18 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg24358785) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.12E+00 | Statistic Test | p-value: 5.55E-06; Z-score: -1.28E+00 | ||
Methylation in Case |
5.57E-01 (Median) | Methylation in Control | 6.23E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 19 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg08303612) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.20E+00 | Statistic Test | p-value: 1.40E-05; Z-score: 5.41E-01 | ||
Methylation in Case |
1.39E-01 (Median) | Methylation in Control | 1.17E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 20 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg11696576) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.09E+00 | Statistic Test | p-value: 4.87E-04; Z-score: -5.11E-01 | ||
Methylation in Case |
6.61E-01 (Median) | Methylation in Control | 7.23E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 21 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
Body (cg06295784) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.01E+00 | Statistic Test | p-value: 1.43E-02; Z-score: 1.15E-01 | ||
Methylation in Case |
6.69E-01 (Median) | Methylation in Control | 6.64E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 22 |
Methylation of SLC22A3 in breast cancer | [ 6 ] | |||
Location |
3'UTR (cg00321824) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.36E+00 | Statistic Test | p-value: 8.19E-16; Z-score: -3.48E+00 | ||
Methylation in Case |
5.82E-01 (Median) | Methylation in Control | 7.93E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Renal cell carcinoma |
7 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in clear cell renal cell carcinoma | [ 7 ] | |||
Location |
TSS1500 (cg21110739) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 1.42E-04; Z-score: -1.09E+00 | ||
Methylation in Case |
8.93E-01 (Median) | Methylation in Control | 9.15E-01 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in clear cell renal cell carcinoma | [ 7 ] | |||
Location |
TSS1500 (cg22117918) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.16E+00 | Statistic Test | p-value: 2.44E-02; Z-score: 5.00E-01 | ||
Methylation in Case |
1.61E-01 (Median) | Methylation in Control | 1.39E-01 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in clear cell renal cell carcinoma | [ 7 ] | |||
Location |
TSS200 (cg17364114) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.29E+00 | Statistic Test | p-value: 3.51E-02; Z-score: 2.07E-01 | ||
Methylation in Case |
2.36E-02 (Median) | Methylation in Control | 1.83E-02 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in clear cell renal cell carcinoma | [ 7 ] | |||
Location |
1stExon (cg07237939) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.16E+00 | Statistic Test | p-value: 2.53E-02; Z-score: 2.01E-01 | ||
Methylation in Case |
2.13E-02 (Median) | Methylation in Control | 1.83E-02 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in clear cell renal cell carcinoma | [ 7 ] | |||
Location |
Body (cg15363979) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 1.51E-06; Z-score: -1.34E+00 | ||
Methylation in Case |
9.14E-01 (Median) | Methylation in Control | 9.37E-01 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A3 in clear cell renal cell carcinoma | [ 7 ] | |||
Location |
Body (cg13280882) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.03E+00 | Statistic Test | p-value: 1.25E-02; Z-score: -6.79E-01 | ||
Methylation in Case |
8.78E-01 (Median) | Methylation in Control | 9.07E-01 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC22A3 in clear cell renal cell carcinoma | [ 7 ] | |||
Location |
Body (cg02042585) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 1.81E-02; Z-score: -6.75E-01 | ||
Methylation in Case |
8.61E-01 (Median) | Methylation in Control | 8.93E-01 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Colorectal cancer |
7 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in colorectal cancer | [ 8 ] | |||
Location |
TSS1500 (cg21110739) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 6.15E-04; Z-score: -9.57E-01 | ||
Methylation in Case |
9.30E-01 (Median) | Methylation in Control | 9.38E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in colorectal cancer | [ 8 ] | |||
Location |
Body (cg15363979) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 6.80E-04; Z-score: -1.16E+00 | ||
Methylation in Case |
9.27E-01 (Median) | Methylation in Control | 9.37E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in colorectal cancer | [ 8 ] | |||
Location |
Body (cg23898998) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 1.75E-02; Z-score: -4.43E-01 | ||
Methylation in Case |
8.50E-01 (Median) | Methylation in Control | 8.68E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in colorectal cancer | [ 8 ] | |||
Location |
Body (cg14255768) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 3.20E-02; Z-score: -6.66E-01 | ||
Methylation in Case |
8.01E-01 (Median) | Methylation in Control | 8.20E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in colorectal cancer | [ 8 ] | |||
Location |
Body (cg11696576) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 4.56E-02; Z-score: -3.56E-01 | ||
Methylation in Case |
8.90E-01 (Median) | Methylation in Control | 9.08E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A3 in colorectal cancer | [ 8 ] | |||
Location |
Body (cg06295784) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.13E+00 | Statistic Test | p-value: 4.93E-02; Z-score: -7.32E-01 | ||
Methylation in Case |
6.67E-01 (Median) | Methylation in Control | 7.53E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC22A3 in colorectal cancer | [ 8 ] | |||
Location |
3'UTR (cg00321824) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 4.46E-03; Z-score: -3.83E-01 | ||
Methylation in Case |
7.98E-01 (Median) | Methylation in Control | 8.14E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Hepatocellular carcinoma |
18 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
TSS1500 (cg26489057) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.77E+00 | Statistic Test | p-value: 1.47E-13; Z-score: 3.67E+00 | ||
Methylation in Case |
5.21E-01 (Median) | Methylation in Control | 2.94E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
TSS1500 (cg07883823) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.43E+00 | Statistic Test | p-value: 3.54E-04; Z-score: -1.05E+00 | ||
Methylation in Case |
1.21E-01 (Median) | Methylation in Control | 1.72E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
TSS1500 (cg22117918) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.33E+00 | Statistic Test | p-value: 2.10E-03; Z-score: -9.30E-01 | ||
Methylation in Case |
1.18E-01 (Median) | Methylation in Control | 1.57E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
TSS200 (cg17364114) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -2.08E+00 | Statistic Test | p-value: 4.44E-04; Z-score: -5.64E-01 | ||
Methylation in Case |
2.35E-02 (Median) | Methylation in Control | 4.91E-02 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
1stExon (cg07237939) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.43E+00 | Statistic Test | p-value: 1.91E-04; Z-score: -5.09E-01 | ||
Methylation in Case |
3.13E-02 (Median) | Methylation in Control | 4.48E-02 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg00706648) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.25E+00 | Statistic Test | p-value: 8.10E-25; Z-score: -7.57E+00 | ||
Methylation in Case |
6.38E-01 (Median) | Methylation in Control | 7.97E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg14387909) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.69E+00 | Statistic Test | p-value: 8.57E-17; Z-score: -7.87E+00 | ||
Methylation in Case |
5.26E-01 (Median) | Methylation in Control | 8.87E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg03912954) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.41E+00 | Statistic Test | p-value: 5.76E-16; Z-score: 5.00E+00 | ||
Methylation in Case |
2.70E-01 (Median) | Methylation in Control | 1.12E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg09226986) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.05E+00 | Statistic Test | p-value: 1.32E-08; Z-score: 9.32E-01 | ||
Methylation in Case |
8.31E-01 (Median) | Methylation in Control | 7.89E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg15020894) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.28E+00 | Statistic Test | p-value: 3.42E-08; Z-score: -1.85E+00 | ||
Methylation in Case |
3.56E-01 (Median) | Methylation in Control | 4.56E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg11696576) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.28E+00 | Statistic Test | p-value: 3.62E-08; Z-score: -1.35E+00 | ||
Methylation in Case |
4.35E-01 (Median) | Methylation in Control | 5.57E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 12 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg13280882) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.13E+00 | Statistic Test | p-value: 3.47E-07; Z-score: -1.29E+00 | ||
Methylation in Case |
7.15E-01 (Median) | Methylation in Control | 8.09E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 13 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg06295784) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.23E+00 | Statistic Test | p-value: 1.53E-05; Z-score: -1.07E+00 | ||
Methylation in Case |
4.25E-01 (Median) | Methylation in Control | 5.22E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 14 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg08303612) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.23E+00 | Statistic Test | p-value: 2.82E-05; Z-score: -7.84E-01 | ||
Methylation in Case |
6.81E-02 (Median) | Methylation in Control | 8.34E-02 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 15 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg02042585) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.04E+00 | Statistic Test | p-value: 7.03E-05; Z-score: 6.58E-01 | ||
Methylation in Case |
8.12E-01 (Median) | Methylation in Control | 7.78E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 16 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg07349212) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.17E+00 | Statistic Test | p-value: 6.88E-04; Z-score: -7.22E-01 | ||
Methylation in Case |
5.95E-02 (Median) | Methylation in Control | 6.94E-02 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 17 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg17768600) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.04E+00 | Statistic Test | p-value: 1.02E-02; Z-score: 4.12E-01 | ||
Methylation in Case |
7.32E-01 (Median) | Methylation in Control | 7.05E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 18 |
Methylation of SLC22A3 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg18126027) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 4.86E-02; Z-score: -1.42E-01 | ||
Methylation in Case |
8.64E-01 (Median) | Methylation in Control | 8.69E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
HIV infection |
11 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in HIV infection | [ 10 ] | |||
Location |
TSS1500 (cg07883823) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.59E+00 | Statistic Test | p-value: 2.26E-06; Z-score: 2.66E+00 | ||
Methylation in Case |
2.44E-01 (Median) | Methylation in Control | 1.54E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in HIV infection | [ 10 ] | |||
Location |
TSS1500 (cg22117918) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.29E+00 | Statistic Test | p-value: 1.39E-05; Z-score: 1.68E+00 | ||
Methylation in Case |
2.15E-01 (Median) | Methylation in Control | 1.66E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in HIV infection | [ 10 ] | |||
Location |
TSS200 (cg17364114) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 6.68E+00 | Statistic Test | p-value: 1.28E-03; Z-score: 2.10E+00 | ||
Methylation in Case |
1.05E-01 (Median) | Methylation in Control | 1.57E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in HIV infection | [ 10 ] | |||
Location |
1stExon (cg07237939) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.79E+00 | Statistic Test | p-value: 1.88E-04; Z-score: 2.08E+00 | ||
Methylation in Case |
5.40E-02 (Median) | Methylation in Control | 1.93E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in HIV infection | [ 10 ] | |||
Location |
Body (cg04794858) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 1.40E-04; Z-score: -1.04E+00 | ||
Methylation in Case |
8.88E-01 (Median) | Methylation in Control | 9.20E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A3 in HIV infection | [ 10 ] | |||
Location |
Body (cg15020894) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.13E+00 | Statistic Test | p-value: 2.20E-04; Z-score: -1.03E+00 | ||
Methylation in Case |
4.67E-01 (Median) | Methylation in Control | 5.26E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC22A3 in HIV infection | [ 10 ] | |||
Location |
Body (cg08303612) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.29E+00 | Statistic Test | p-value: 5.28E-04; Z-score: 1.21E+00 | ||
Methylation in Case |
1.06E-01 (Median) | Methylation in Control | 8.20E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC22A3 in HIV infection | [ 10 ] | |||
Location |
Body (cg15363979) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.02E+00 | Statistic Test | p-value: 6.38E-04; Z-score: 1.19E+00 | ||
Methylation in Case |
9.41E-01 (Median) | Methylation in Control | 9.21E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC22A3 in HIV infection | [ 10 ] | |||
Location |
Body (cg23898998) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 8.23E-04; Z-score: -8.32E-01 | ||
Methylation in Case |
8.10E-01 (Median) | Methylation in Control | 8.44E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of SLC22A3 in HIV infection | [ 10 ] | |||
Location |
Body (cg07349212) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.09E+00 | Statistic Test | p-value: 1.27E-02; Z-score: 4.39E-01 | ||
Methylation in Case |
7.00E-02 (Median) | Methylation in Control | 6.43E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of SLC22A3 in HIV infection | [ 10 ] | |||
Location |
Body (cg06295784) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.02E+00 | Statistic Test | p-value: 1.88E-02; Z-score: 4.69E-01 | ||
Methylation in Case |
7.91E-01 (Median) | Methylation in Control | 7.73E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Lung adenocarcinoma |
5 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in lung adenocarcinoma | [ 11 ] | |||
Location |
TSS1500 (cg22117918) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.49E+00 | Statistic Test | p-value: 6.40E-03; Z-score: 2.54E+00 | ||
Methylation in Case |
3.18E-01 (Median) | Methylation in Control | 2.14E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in lung adenocarcinoma | [ 11 ] | |||
Location |
TSS1500 (cg07883823) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.39E+00 | Statistic Test | p-value: 7.87E-03; Z-score: 1.91E+00 | ||
Methylation in Case |
3.37E-01 (Median) | Methylation in Control | 2.42E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in lung adenocarcinoma | [ 11 ] | |||
Location |
TSS200 (cg17364114) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 3.83E+00 | Statistic Test | p-value: 4.07E-04; Z-score: 7.16E+00 | ||
Methylation in Case |
3.25E-01 (Median) | Methylation in Control | 8.50E-02 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in lung adenocarcinoma | [ 11 ] | |||
Location |
1stExon (cg07237939) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 3.07E+00 | Statistic Test | p-value: 1.25E-03; Z-score: 6.50E+00 | ||
Methylation in Case |
2.05E-01 (Median) | Methylation in Control | 6.68E-02 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in lung adenocarcinoma | [ 11 ] | |||
Location |
Body (cg08303612) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.37E+00 | Statistic Test | p-value: 1.66E-02; Z-score: 2.49E+00 | ||
Methylation in Case |
1.68E-01 (Median) | Methylation in Control | 1.23E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Papillary thyroid cancer |
8 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in papillary thyroid cancer | [ 12 ] | |||
Location |
TSS1500 (cg21110739) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 2.00E-05; Z-score: -1.25E+00 | ||
Methylation in Case |
8.76E-01 (Median) | Methylation in Control | 8.96E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in papillary thyroid cancer | [ 12 ] | |||
Location |
TSS1500 (cg22117918) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.09E+00 | Statistic Test | p-value: 3.61E-04; Z-score: 5.18E-01 | ||
Methylation in Case |
1.90E-01 (Median) | Methylation in Control | 1.74E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in papillary thyroid cancer | [ 12 ] | |||
Location |
TSS1500 (cg07883823) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.10E+00 | Statistic Test | p-value: 2.36E-03; Z-score: 5.50E-01 | ||
Methylation in Case |
2.21E-01 (Median) | Methylation in Control | 2.00E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in papillary thyroid cancer | [ 12 ] | |||
Location |
Body (cg04794858) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 2.01E-04; Z-score: -7.11E-01 | ||
Methylation in Case |
8.89E-01 (Median) | Methylation in Control | 9.04E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in papillary thyroid cancer | [ 12 ] | |||
Location |
Body (cg13280882) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 6.45E-04; Z-score: -8.51E-01 | ||
Methylation in Case |
9.40E-01 (Median) | Methylation in Control | 9.51E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A3 in papillary thyroid cancer | [ 12 ] | |||
Location |
Body (cg15363979) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 2.75E-03; Z-score: -4.56E-01 | ||
Methylation in Case |
8.89E-01 (Median) | Methylation in Control | 8.95E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC22A3 in papillary thyroid cancer | [ 12 ] | |||
Location |
Body (cg06295784) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 1.39E-02; Z-score: -3.89E-01 | ||
Methylation in Case |
8.43E-01 (Median) | Methylation in Control | 8.54E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC22A3 in papillary thyroid cancer | [ 12 ] | |||
Location |
Body (cg18126027) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 2.68E-02; Z-score: -8.29E-01 | ||
Methylation in Case |
8.96E-01 (Median) | Methylation in Control | 9.15E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Colon cancer |
6 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in colon adenocarcinoma | [ 14 ] | |||
Location |
TSS200 (cg13028471) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.20E+00 | Statistic Test | p-value: 3.50E-03; Z-score: -3.04E-01 | ||
Methylation in Case |
6.58E-02 (Median) | Methylation in Control | 7.87E-02 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in colon adenocarcinoma | [ 14 ] | |||
Location |
Body (cg04186249) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.31E+00 | Statistic Test | p-value: 1.73E-06; Z-score: -4.75E+00 | ||
Methylation in Case |
5.55E-01 (Median) | Methylation in Control | 7.26E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in colon adenocarcinoma | [ 14 ] | |||
Location |
Body (cg05275995) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.07E+00 | Statistic Test | p-value: 1.97E-03; Z-score: -1.88E+00 | ||
Methylation in Case |
7.43E-01 (Median) | Methylation in Control | 7.98E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in colon adenocarcinoma | [ 14 ] | |||
Location |
Body (cg16523422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.14E+00 | Statistic Test | p-value: 2.60E-03; Z-score: -2.01E+00 | ||
Methylation in Case |
6.40E-01 (Median) | Methylation in Control | 7.29E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in colon adenocarcinoma | [ 14 ] | |||
Location |
Body (cg13071812) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.12E+00 | Statistic Test | p-value: 3.57E-03; Z-score: -6.98E-01 | ||
Methylation in Case |
1.49E-01 (Median) | Methylation in Control | 1.67E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A3 in colon adenocarcinoma | [ 14 ] | |||
Location |
3'UTR (cg20678043) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.29E+00 | Statistic Test | p-value: 4.17E-05; Z-score: -3.56E+00 | ||
Methylation in Case |
5.67E-01 (Median) | Methylation in Control | 7.30E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Atypical teratoid rhabdoid tumor |
12 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
1stExon (cg07237939) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.42E+00 | Statistic Test | p-value: 2.39E-21; Z-score: -3.90E+00 | ||
Methylation in Case |
5.59E-01 (Median) | Methylation in Control | 7.93E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
Body (cg01923312) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.19E+00 | Statistic Test | p-value: 1.03E-04; Z-score: -8.99E-01 | ||
Methylation in Case |
6.58E-01 (Median) | Methylation in Control | 7.86E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
Body (cg02042585) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.07E+00 | Statistic Test | p-value: 1.11E-04; Z-score: -9.25E-01 | ||
Methylation in Case |
7.57E-01 (Median) | Methylation in Control | 8.11E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
Body (cg04794858) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.08E+00 | Statistic Test | p-value: 9.54E-04; Z-score: 7.88E-01 | ||
Methylation in Case |
8.89E-01 (Median) | Methylation in Control | 8.20E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
Body (cg06295784) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.02E+00 | Statistic Test | p-value: 2.27E-03; Z-score: 6.78E-01 | ||
Methylation in Case |
9.31E-01 (Median) | Methylation in Control | 9.09E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A3 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
Body (cg07349212) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.07E+00 | Statistic Test | p-value: 3.84E-03; Z-score: -6.99E-01 | ||
Methylation in Case |
7.37E-01 (Median) | Methylation in Control | 7.90E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC22A3 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
Body (cg08303612) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.17E+00 | Statistic Test | p-value: 5.74E-03; Z-score: 4.06E-01 | ||
Methylation in Case |
1.43E-01 (Median) | Methylation in Control | 1.22E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC22A3 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
Body (cg09226986) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 9.57E-03; Z-score: -4.48E-01 | ||
Methylation in Case |
9.19E-01 (Median) | Methylation in Control | 9.27E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC22A3 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
Body (cg11696576) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.05E+00 | Statistic Test | p-value: 2.46E-02; Z-score: -4.55E-01 | ||
Methylation in Case |
7.03E-01 (Median) | Methylation in Control | 7.40E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of SLC22A3 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
Body (cg13280882) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.00E+00 | Statistic Test | p-value: 3.38E-02; Z-score: -1.20E-01 | ||
Methylation in Case |
9.68E-01 (Median) | Methylation in Control | 9.72E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of SLC22A3 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
Body (cg14255768) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.07E+00 | Statistic Test | p-value: 4.39E-02; Z-score: 5.86E-01 | ||
Methylation in Case |
8.00E-01 (Median) | Methylation in Control | 7.47E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 12 |
Methylation of SLC22A3 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
3'UTR (cg00321824) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.28E+00 | Statistic Test | p-value: 9.49E-16; Z-score: -2.45E+00 | ||
Methylation in Case |
5.95E-01 (Median) | Methylation in Control | 7.62E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Panic disorder |
2 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in panic disorder | [ 16 ] | |||
Location |
Body (cg18126027) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.18E+00 | Statistic Test | p-value: 6.78E-03; Z-score: 7.21E-01 | ||
Methylation in Case |
1.71E+00 (Median) | Methylation in Control | 1.45E+00 (Median) | ||
Studied Phenotype |
Panic disorder [ ICD-11: 6B01] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in panic disorder | [ 16 ] | |||
Location |
Body (cg01923312) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -5.04E-01 | Statistic Test | p-value: 2.49E-02; Z-score: -3.16E-01 | ||
Methylation in Case |
-2.68E-01 (Median) | Methylation in Control | -1.35E-01 (Median) | ||
Studied Phenotype |
Panic disorder [ ICD-11: 6B01] | ||||
Experimental Material |
Patient tissue samples | ||||
Systemic lupus erythematosus |
5 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A3 in systemic lupus erythematosus | [ 17 ] | |||
Location |
Body (cg14255768) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 6.48E-04; Z-score: -1.39E-01 | ||
Methylation in Case |
5.99E-01 (Median) | Methylation in Control | 6.07E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A3 in systemic lupus erythematosus | [ 17 ] | |||
Location |
Body (cg15363979) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.00E+00 | Statistic Test | p-value: 2.56E-02; Z-score: -1.17E-01 | ||
Methylation in Case |
9.10E-01 (Median) | Methylation in Control | 9.12E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A3 in systemic lupus erythematosus | [ 17 ] | |||
Location |
Body (cg04794858) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 2.59E-02; Z-score: -2.29E-01 | ||
Methylation in Case |
8.66E-01 (Median) | Methylation in Control | 8.75E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A3 in systemic lupus erythematosus | [ 17 ] | |||
Location |
Body (cg23898998) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 3.27E-02; Z-score: -1.47E-01 | ||
Methylation in Case |
7.86E-01 (Median) | Methylation in Control | 7.95E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A3 in systemic lupus erythematosus | [ 17 ] | |||
Location |
Body (cg19149031) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.00E+00 | Statistic Test | p-value: 4.01E-02; Z-score: 6.60E-02 | ||
Methylation in Case |
8.69E-01 (Median) | Methylation in Control | 8.65E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
microRNA |
|||||
Coronary artery disease |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
miR-147a downregulates SLC22A3 expression in coronary artery disease | [ 18 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay | ||
Related Molecular Changes |
Down regulation of SLC22A3 | Experiment Method | RT-qPCR | ||
miRNA Stemloop ID |
miR-147a | miRNA Mature ID | Unclear | ||
miRNA Target Type |
Direct | ||||
Studied Phenotype |
Coronary artery disease [ ICD-11: BA6Z] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
The rs3088442 G allele might suppress miR-147a binding to the 3'-UTR region of SLC22A3, resulting in altered SLC22A3 and LPA gene expression. | ||||
Unclear Phenotype |
24 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
miR-124 directly targets SLC22A3 | [ 19 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Microarray | ||
miRNA Stemloop ID |
miR-124 | miRNA Mature ID | miR-124-3p | ||
miRNA Sequence |
UAAGGCACGCGGUGAAUGCCAA | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Human cervical cancer cell line (Hela) | ||||
Epigenetic Phenomenon 2 |
miR-1272 directly targets SLC22A3 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-1272 | miRNA Mature ID | miR-1272 | ||
miRNA Sequence |
GAUGAUGAUGGCAGCAAAUUCUGAAA | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 3 |
miR-130b directly targets SLC22A3 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-130b | miRNA Mature ID | miR-130b-5p | ||
miRNA Sequence |
ACUCUUUCCCUGUUGCACUAC | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 4 |
miR-1322 directly targets SLC22A3 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-1322 | miRNA Mature ID | miR-1322 | ||
miRNA Sequence |
GAUGAUGCUGCUGAUGCUG | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 5 |
miR-147a directly targets SLC22A3 | [ 18 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay | ||
miRNA Stemloop ID |
miR-147a | miRNA Mature ID | miR-147a | ||
miRNA Sequence |
GUGUGUGGAAAUGCUUCUGC | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 6 |
miR-148b directly targets SLC22A3 | [ 21 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Microarray | ||
miRNA Stemloop ID |
miR-148b | miRNA Mature ID | miR-148b-3p | ||
miRNA Sequence |
UCAGUGCAUCACAGAACUUUGU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Human cervical cancer cell line (Hela) | ||||
Epigenetic Phenomenon 7 |
miR-23a directly targets SLC22A3 | [ 22 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-23a | miRNA Mature ID | miR-23a-5p | ||
miRNA Sequence |
GGGGUUCCUGGGGAUGGGAUUU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 8 |
miR-23b directly targets SLC22A3 | [ 22 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-23b | miRNA Mature ID | miR-23b-5p | ||
miRNA Sequence |
UGGGUUCCUGGCAUGCUGAUUU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 9 |
miR-3940 directly targets SLC22A3 | [ 22 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-3940 | miRNA Mature ID | miR-3940-5p | ||
miRNA Sequence |
GUGGGUUGGGGCGGGCUCUG | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 10 |
miR-4291 directly targets SLC22A3 | [ 22 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-4291 | miRNA Mature ID | miR-4291 | ||
miRNA Sequence |
UUCAGCAGGAACAGCU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 11 |
miR-4330 directly targets SLC22A3 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-4330 | miRNA Mature ID | miR-4330 | ||
miRNA Sequence |
CCUCAGAUCAGAGCCUUGC | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 12 |
miR-4494 directly targets SLC22A3 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-4494 | miRNA Mature ID | miR-4494 | ||
miRNA Sequence |
CCAGACUGUGGCUGACCAGAGG | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 13 |
miR-4507 directly targets SLC22A3 | [ 22 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-4507 | miRNA Mature ID | miR-4507 | ||
miRNA Sequence |
CUGGGUUGGGCUGGGCUGGG | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 14 |
miR-452 directly targets SLC22A3 | [ 22 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-452 | miRNA Mature ID | miR-452-3p | ||
miRNA Sequence |
CUCAUCUGCAAAGAAGUAAGUG | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 15 |
miR-4639 directly targets SLC22A3 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-4639 | miRNA Mature ID | miR-4639-3p | ||
miRNA Sequence |
UCACUCUCACCUUGCUUUGC | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 16 |
miR-4753 directly targets SLC22A3 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-4753 | miRNA Mature ID | miR-4753-3p | ||
miRNA Sequence |
UUCUCUUUCUUUAGCCUUGUGU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 17 |
miR-499b directly targets SLC22A3 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-499b | miRNA Mature ID | miR-499b-5p | ||
miRNA Sequence |
ACAGACUUGCUGUGAUGUUCA | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 18 |
miR-515 directly targets SLC22A3 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-515 | miRNA Mature ID | miR-515-5p | ||
miRNA Sequence |
UUCUCCAAAAGAAAGCACUUUCUG | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 19 |
miR-519d directly targets SLC22A3 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-519d | miRNA Mature ID | miR-519d-5p | ||
miRNA Sequence |
CCUCCAAAGGGAAGCGCUUUCUGUU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 20 |
miR-519e directly targets SLC22A3 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-519e | miRNA Mature ID | miR-519e-5p | ||
miRNA Sequence |
UUCUCCAAAAGGGAGCACUUUC | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 21 |
miR-545 directly targets SLC22A3 | [ 22 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-545 | miRNA Mature ID | miR-545-3p | ||
miRNA Sequence |
UCAGCAAACAUUUAUUGUGUGC | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 22 |
miR-5695 directly targets SLC22A3 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-5695 | miRNA Mature ID | miR-5695 | ||
miRNA Sequence |
ACUCCAAGAAGAAUCUAGACAG | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 23 |
miR-6839 directly targets SLC22A3 | [ 22 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-6839 | miRNA Mature ID | miR-6839-3p | ||
miRNA Sequence |
UUGGGUUUUCUCUUCAAUCCAG | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 24 |
miR-9 directly targets SLC22A3 | [ 21 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Microarray | ||
miRNA Stemloop ID |
miR-9 | miRNA Mature ID | miR-9-5p | ||
miRNA Sequence |
UCUUUGGUUAUCUAGCUGUAUGA | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Human cervical cancer cell line (Hela) | ||||
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