Detail Information of Epigenetic Regulations
General Information of Drug Transporter (DT) | |||||
---|---|---|---|---|---|
DT ID | DTD0023 Transporter Info | ||||
Gene Name | SLC22A5 | ||||
Transporter Name | Organic cation/carnitine transporter 2 | ||||
Gene ID | |||||
UniProt ID | |||||
Epigenetic Regulations of This DT (EGR) | |||||
---|---|---|---|---|---|
Methylation |
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Colon cancer |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of SLC22A5 in colon cancer | [ 1 ] | |||
Location |
Promoter (-84 to +591, +1275 to 1492 bp) | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Related Molecular Changes |
Down regulation of SLC22A5 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Human colon cancer cell line (LS174T) | ||||
Additional Notes |
Hypermethylation within the OCTN2 promoter is responsible for the down-regulation of OCTN2 in HepG2. | ||||
Hepatocellular carcinoma |
8 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of SLC22A5 in hepatpcellular carcinoma | [ 1 ] | |||
Location |
Promoter (-274 to -97, +1275 to +1492 bp) | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Related Molecular Changes |
Down regulation of SLC22A5 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Human hepatocellular carcinoma cell line (HepG2) | ||||
Additional Notes |
Hypermethylation within the OCTN2 promoter is responsible for the down-regulation of OCTN2 in HepG2. | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in hepatocellular carcinoma | [ 8 ] | |||
Location |
TSS1500 (cg06746492) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.57E+00 | Statistic Test | p-value: 2.05E-16; Z-score: -3.28E+00 | ||
Methylation in Case |
4.76E-01 (Median) | Methylation in Control | 7.47E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A5 in hepatocellular carcinoma | [ 8 ] | |||
Location |
TSS1500 (cg14196790) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.13E+00 | Statistic Test | p-value: 1.07E-02; Z-score: -3.77E-01 | ||
Methylation in Case |
1.10E-01 (Median) | Methylation in Control | 1.24E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A5 in hepatocellular carcinoma | [ 8 ] | |||
Location |
Body (cg17989736) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -2.05E+00 | Statistic Test | p-value: 5.49E-25; Z-score: -7.00E+00 | ||
Methylation in Case |
3.59E-01 (Median) | Methylation in Control | 7.36E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A5 in hepatocellular carcinoma | [ 8 ] | |||
Location |
Body (cg06588735) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.55E+00 | Statistic Test | p-value: 7.48E-15; Z-score: -4.28E+00 | ||
Methylation in Case |
5.33E-01 (Median) | Methylation in Control | 8.28E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A5 in hepatocellular carcinoma | [ 8 ] | |||
Location |
Body (cg24642933) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.26E+00 | Statistic Test | p-value: 1.55E-12; Z-score: -2.68E+00 | ||
Methylation in Case |
4.73E-01 (Median) | Methylation in Control | 5.99E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC22A5 in hepatocellular carcinoma | [ 8 ] | |||
Location |
Body (cg16647868) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.19E+00 | Statistic Test | p-value: 3.25E-06; Z-score: -1.01E+00 | ||
Methylation in Case |
1.01E-01 (Median) | Methylation in Control | 1.21E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC22A5 in hepatocellular carcinoma | [ 8 ] | |||
Location |
Body (cg12558347) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.04E+00 | Statistic Test | p-value: 2.16E-02; Z-score: 3.56E-01 | ||
Methylation in Case |
5.64E-01 (Median) | Methylation in Control | 5.42E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Colon cancer |
3 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in colon adenocarcinoma | [ 2 ] | |||
Location |
5'UTR (cg19918022) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.08E+00 | Statistic Test | p-value: 3.20E-04; Z-score: -2.78E+00 | ||
Methylation in Case |
7.67E-01 (Median) | Methylation in Control | 8.31E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in colon adenocarcinoma | [ 2 ] | |||
Location |
1stExon (cg15668691) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 6.84E-04; Z-score: -1.38E+00 | ||
Methylation in Case |
8.28E-01 (Median) | Methylation in Control | 8.59E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A5 in colon adenocarcinoma | [ 2 ] | |||
Location |
Body (cg21803141) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.12E+00 | Statistic Test | p-value: 2.49E-05; Z-score: -2.53E+00 | ||
Methylation in Case |
5.32E-01 (Median) | Methylation in Control | 5.96E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Pancretic ductal adenocarcinoma |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in pancretic ductal adenocarcinoma | [ 3 ] | |||
Location |
5'UTR (cg10589249) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.07E+00 | Statistic Test | p-value: 1.89E-05; Z-score: 3.48E-01 | ||
Methylation in Case |
3.13E-02 (Median) | Methylation in Control | 2.92E-02 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Bladder cancer |
7 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in bladder cancer | [ 4 ] | |||
Location |
TSS1500 (cg14196790) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.57E+00 | Statistic Test | p-value: 4.50E-02; Z-score: -1.72E+00 | ||
Methylation in Case |
8.99E-02 (Median) | Methylation in Control | 1.41E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in bladder cancer | [ 4 ] | |||
Location |
TSS200 (cg21911579) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.22E+00 | Statistic Test | p-value: 4.37E-02; Z-score: -1.34E+00 | ||
Methylation in Case |
3.26E-02 (Median) | Methylation in Control | 3.99E-02 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A5 in bladder cancer | [ 4 ] | |||
Location |
Body (cg19040266) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.63E+00 | Statistic Test | p-value: 1.06E-07; Z-score: -1.81E+01 | ||
Methylation in Case |
2.88E-01 (Median) | Methylation in Control | 4.70E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A5 in bladder cancer | [ 4 ] | |||
Location |
Body (cg18104539) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.10E+00 | Statistic Test | p-value: 4.43E-06; Z-score: -7.34E+00 | ||
Methylation in Case |
8.10E-01 (Median) | Methylation in Control | 8.94E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A5 in bladder cancer | [ 4 ] | |||
Location |
Body (cg23475112) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 2.02E-02; Z-score: -7.98E-01 | ||
Methylation in Case |
9.58E-01 (Median) | Methylation in Control | 9.65E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC22A5 in bladder cancer | [ 4 ] | |||
Location |
Body (cg16647868) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.20E+00 | Statistic Test | p-value: 4.58E-02; Z-score: -1.13E+00 | ||
Methylation in Case |
1.09E-01 (Median) | Methylation in Control | 1.30E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC22A5 in bladder cancer | [ 4 ] | |||
Location |
3'UTR (cg12481567) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.03E+00 | Statistic Test | p-value: 2.42E-02; Z-score: -2.29E+00 | ||
Methylation in Case |
8.63E-01 (Median) | Methylation in Control | 8.85E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Renal cell carcinoma |
3 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in clear cell renal cell carcinoma | [ 5 ] | |||
Location |
TSS1500 (cg06968155) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.13E+00 | Statistic Test | p-value: 6.58E-05; Z-score: 1.21E+00 | ||
Methylation in Case |
6.09E-02 (Median) | Methylation in Control | 5.38E-02 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in clear cell renal cell carcinoma | [ 5 ] | |||
Location |
TSS1500 (cg14196790) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.39E+00 | Statistic Test | p-value: 4.34E-03; Z-score: -8.25E-01 | ||
Methylation in Case |
7.03E-02 (Median) | Methylation in Control | 9.74E-02 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A5 in clear cell renal cell carcinoma | [ 5 ] | |||
Location |
Body (cg16647868) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.13E+00 | Statistic Test | p-value: 1.81E-03; Z-score: 6.35E-01 | ||
Methylation in Case |
7.79E-02 (Median) | Methylation in Control | 6.90E-02 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Colorectal cancer |
4 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in colorectal cancer | [ 6 ] | |||
Location |
TSS1500 (cg07538946) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.32E+00 | Statistic Test | p-value: 2.20E-03; Z-score: -1.13E+00 | ||
Methylation in Case |
2.63E-02 (Median) | Methylation in Control | 3.46E-02 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in colorectal cancer | [ 6 ] | |||
Location |
TSS1500 (cg06968155) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.08E+00 | Statistic Test | p-value: 2.24E-02; Z-score: 5.79E-01 | ||
Methylation in Case |
1.67E-01 (Median) | Methylation in Control | 1.55E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A5 in colorectal cancer | [ 6 ] | |||
Location |
Body (cg23475112) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 4.83E-05; Z-score: -1.49E+00 | ||
Methylation in Case |
9.36E-01 (Median) | Methylation in Control | 9.56E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A5 in colorectal cancer | [ 6 ] | |||
Location |
Body (cg12558347) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.13E+00 | Statistic Test | p-value: 5.04E-03; Z-score: 6.82E-01 | ||
Methylation in Case |
6.07E-01 (Median) | Methylation in Control | 5.39E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Depression |
3 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in depression | [ 7 ] | |||
Location |
TSS1500 (cg06968155) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.04E+00 | Statistic Test | p-value: 3.40E-02; Z-score: 4.55E-01 | ||
Methylation in Case |
8.75E-02 (Median) | Methylation in Control | 8.40E-02 (Median) | ||
Studied Phenotype |
Depression [ ICD-11: 6A8Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in depression | [ 7 ] | |||
Location |
TSS200 (cg24060327) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.06E+00 | Statistic Test | p-value: 4.46E-02; Z-score: 3.98E-01 | ||
Methylation in Case |
5.77E-02 (Median) | Methylation in Control | 5.43E-02 (Median) | ||
Studied Phenotype |
Depression [ ICD-11: 6A8Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A5 in depression | [ 7 ] | |||
Location |
Body (cg12558347) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.01E+00 | Statistic Test | p-value: 2.88E-02; Z-score: 3.11E-01 | ||
Methylation in Case |
7.72E-01 (Median) | Methylation in Control | 7.64E-01 (Median) | ||
Studied Phenotype |
Depression [ ICD-11: 6A8Z] | ||||
Experimental Material |
Patient tissue samples | ||||
HIV infection |
5 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in HIV infection | [ 9 ] | |||
Location |
TSS1500 (cg07538946) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.50E+00 | Statistic Test | p-value: 8.81E-06; Z-score: 1.76E+00 | ||
Methylation in Case |
3.12E-02 (Median) | Methylation in Control | 2.08E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in HIV infection | [ 9 ] | |||
Location |
TSS1500 (cg14196790) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.28E+00 | Statistic Test | p-value: 1.98E-03; Z-score: 1.27E+00 | ||
Methylation in Case |
1.68E-01 (Median) | Methylation in Control | 1.31E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A5 in HIV infection | [ 9 ] | |||
Location |
TSS1500 (cg21948465) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.35E+00 | Statistic Test | p-value: 2.38E-02; Z-score: 3.86E-01 | ||
Methylation in Case |
2.06E-02 (Median) | Methylation in Control | 1.53E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A5 in HIV infection | [ 9 ] | |||
Location |
Body (cg12558347) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.04E+00 | Statistic Test | p-value: 1.04E-08; Z-score: 1.34E+00 | ||
Methylation in Case |
8.99E-01 (Median) | Methylation in Control | 8.62E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC22A5 in HIV infection | [ 9 ] | |||
Location |
Body (cg16647868) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.10E+00 | Statistic Test | p-value: 3.69E-02; Z-score: 6.04E-01 | ||
Methylation in Case |
1.36E-01 (Median) | Methylation in Control | 1.23E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Lung adenocarcinoma |
4 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in lung adenocarcinoma | [ 10 ] | |||
Location |
TSS1500 (cg14196790) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.34E+00 | Statistic Test | p-value: 6.87E-03; Z-score: -1.28E+00 | ||
Methylation in Case |
2.03E-01 (Median) | Methylation in Control | 2.72E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in lung adenocarcinoma | [ 10 ] | |||
Location |
TSS1500 (cg07538946) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.30E+00 | Statistic Test | p-value: 1.11E-02; Z-score: -1.92E+00 | ||
Methylation in Case |
4.30E-02 (Median) | Methylation in Control | 5.59E-02 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A5 in lung adenocarcinoma | [ 10 ] | |||
Location |
Body (cg12558347) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.37E+00 | Statistic Test | p-value: 1.24E-03; Z-score: 4.01E+00 | ||
Methylation in Case |
5.97E-01 (Median) | Methylation in Control | 4.37E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A5 in lung adenocarcinoma | [ 10 ] | |||
Location |
Body (cg19040266) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.16E+00 | Statistic Test | p-value: 2.24E-02; Z-score: 1.65E+00 | ||
Methylation in Case |
5.92E-01 (Median) | Methylation in Control | 5.12E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Panic disorder |
2 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in panic disorder | [ 11 ] | |||
Location |
TSS1500 (cg21948465) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 9.69E-01 | Statistic Test | p-value: 3.55E-02; Z-score: 4.52E-01 | ||
Methylation in Case |
-4.12E+00 (Median) | Methylation in Control | -4.25E+00 (Median) | ||
Studied Phenotype |
Panic disorder [ ICD-11: 6B01] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in panic disorder | [ 11 ] | |||
Location |
TSS200 (cg24060327) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 9.94E-01 | Statistic Test | p-value: 4.49E-02; Z-score: 1.51E-01 | ||
Methylation in Case |
-5.39E+00 (Median) | Methylation in Control | -5.43E+00 (Median) | ||
Studied Phenotype |
Panic disorder [ ICD-11: 6B01] | ||||
Experimental Material |
Patient tissue samples | ||||
Papillary thyroid cancer |
4 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in papillary thyroid cancer | [ 12 ] | |||
Location |
TSS1500 (cg07538946) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.09E+00 | Statistic Test | p-value: 3.27E-03; Z-score: -5.31E-01 | ||
Methylation in Case |
5.75E-02 (Median) | Methylation in Control | 6.24E-02 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in papillary thyroid cancer | [ 12 ] | |||
Location |
Body (cg19040266) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.21E+00 | Statistic Test | p-value: 2.23E-16; Z-score: -3.04E+00 | ||
Methylation in Case |
5.87E-01 (Median) | Methylation in Control | 7.08E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A5 in papillary thyroid cancer | [ 12 ] | |||
Location |
Body (cg23475112) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 1.82E-05; Z-score: -1.03E+00 | ||
Methylation in Case |
9.34E-01 (Median) | Methylation in Control | 9.44E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A5 in papillary thyroid cancer | [ 12 ] | |||
Location |
3'UTR (cg12481567) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 2.31E-05; Z-score: -9.23E-01 | ||
Methylation in Case |
9.33E-01 (Median) | Methylation in Control | 9.46E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Prostate cancer |
3 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in prostate cancer | [ 13 ] | |||
Location |
TSS1500 (cg00748432) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.19E+00 | Statistic Test | p-value: 3.74E-02; Z-score: 1.68E+00 | ||
Methylation in Case |
8.16E-01 (Median) | Methylation in Control | 6.88E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in prostate cancer | [ 13 ] | |||
Location |
Body (cg20706711) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.16E+00 | Statistic Test | p-value: 1.90E-02; Z-score: 2.81E+00 | ||
Methylation in Case |
8.60E-01 (Median) | Methylation in Control | 7.39E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Systemic lupus erythematosus |
4 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in systemic lupus erythematosus | [ 14 ] | |||
Location |
TSS1500 (cg14196790) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.16E+00 | Statistic Test | p-value: 4.85E-02; Z-score: 3.08E-01 | ||
Methylation in Case |
2.51E-01 (Median) | Methylation in Control | 2.16E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in systemic lupus erythematosus | [ 14 ] | |||
Location |
TSS200 (cg21911579) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.05E+00 | Statistic Test | p-value: 1.53E-02; Z-score: 1.78E-01 | ||
Methylation in Case |
3.72E-02 (Median) | Methylation in Control | 3.55E-02 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A5 in systemic lupus erythematosus | [ 14 ] | |||
Location |
1stExon (cg20453264) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 5.45E-03; Z-score: -8.28E-02 | ||
Methylation in Case |
8.06E-02 (Median) | Methylation in Control | 8.19E-02 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC22A5 in systemic lupus erythematosus | [ 14 ] | |||
Location |
Body (cg12558347) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 4.26E-02; Z-score: -2.85E-01 | ||
Methylation in Case |
9.01E-01 (Median) | Methylation in Control | 9.07E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Atypical teratoid rhabdoid tumor |
3 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
1stExon (cg20453264) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.02E+00 | Statistic Test | p-value: 4.70E-17; Z-score: 2.80E+00 | ||
Methylation in Case |
7.25E-01 (Median) | Methylation in Control | 3.59E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
Body (cg12558347) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.28E+00 | Statistic Test | p-value: 2.80E-02; Z-score: -8.21E-01 | ||
Methylation in Case |
7.53E-02 (Median) | Methylation in Control | 9.65E-02 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A5 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
3'UTR (cg12481567) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.13E+00 | Statistic Test | p-value: 1.49E-11; Z-score: -2.16E+00 | ||
Methylation in Case |
7.52E-01 (Median) | Methylation in Control | 8.51E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Breast cancer |
3 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC22A5 in breast cancer | [ 16 ] | |||
Location |
Body (cg12558347) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.85E+00 | Statistic Test | p-value: 1.92E-11; Z-score: 2.72E+00 | ||
Methylation in Case |
3.99E-01 (Median) | Methylation in Control | 2.15E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC22A5 in breast cancer | [ 16 ] | |||
Location |
Body (cg23475112) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.13E+00 | Statistic Test | p-value: 5.17E-09; Z-score: -2.39E+00 | ||
Methylation in Case |
8.45E-01 (Median) | Methylation in Control | 9.51E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC22A5 in breast cancer | [ 16 ] | |||
Location |
Body (cg18104539) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.03E+00 | Statistic Test | p-value: 5.52E-04; Z-score: -7.61E-01 | ||
Methylation in Case |
8.69E-01 (Median) | Methylation in Control | 8.96E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Asthma |
2 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of SLC22A5 in asthma | [ 17 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite pyrosequencing | ||
Studied Phenotype |
Asthma [ ICD-11: CA23] | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
Genotype influences DNA methylation levels at the SLC22A5 gene promoter region in LCLs. | ||||
Multilayered rosettes embryonal tumour |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Moderate hypermethylation of SLC22A5 in multilayered rosettes embryonal tumour than that in healthy individual | ||||
Studied Phenotype |
Multilayered rosettes embryonal tumour [ICD-11:2A00.1] | ||||
The Methylation Level of Disease Section Compare with the Healthy Individual |
p-value: 1.03E-15; Fold-change: 0.262467257; Z-score: 6.744378667 | ||||
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
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Please Click the above Thumbnail to View/Download the Methylation Barchart for All Samples | |||||
microRNA |
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Unclear Phenotype |
3 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
miR-124 directly targets SLC22A5 | [ 18 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Microarray | ||
miRNA Stemloop ID |
miR-124 | miRNA Mature ID | miR-124-3p | ||
miRNA Sequence |
UAAGGCACGCGGUGAAUGCCAA | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Human cervical cancer cell line (Hela) | ||||
Epigenetic Phenomenon 2 |
miR-148b directly targets SLC22A5 | [ 19 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Microarray | ||
miRNA Stemloop ID |
miR-148b | miRNA Mature ID | miR-148b-3p | ||
miRNA Sequence |
UCAGUGCAUCACAGAACUUUGU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Human cervical cancer cell line (Hela) | ||||
Epigenetic Phenomenon 3 |
miR-9 directly targets SLC22A5 | [ 19 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Microarray | ||
miRNA Stemloop ID |
miR-9 | miRNA Mature ID | miR-9-5p | ||
miRNA Sequence |
UCUUUGGUUAUCUAGCUGUAUGA | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Human cervical cancer cell line (Hela) | ||||
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