Detail Information of Genetic Polymorphisms
General Information of Drug Transporter (DT) | |||||
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DT ID | DTD0015 Transporter Info | ||||
Gene Name | ABCC4 | ||||
Protein Name | Multidrug resistance-associated protein 4 | ||||
Gene ID | |||||
UniProt ID | |||||
Genetic Polymorphisms of DT (GPD) | |||||
Genetic Polymorphism | rs1059751 | ||||
Site of GPD | chr13:95020696 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | A>G | ||||
Minor Allele Frequency | G=0.4145/2076 (Global) | ||||
Allele G | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Tenofovir | Drug Info | HIV Infection | Correlated with the increased likelihood of kidney diseases in patients (compare with Allele A) | [ 1] | |
Genetic Polymorphism | rs11568658 | ||||
Site of GPD | chr13:95210754 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>A | ||||
Minor Allele Frequency | A=0.0517/259 (Global) | ||||
Genotype AC | Click to Show/Hide the Full List of Affected Drugs: 2 Drugs in Total | ||||
Latanoprost | Drug Info | Open-Angle Glaucoma | Correlated with the decreased drug response in patients (compare with genotype CC) | [ 2] | |
Valganciclovir | Drug Info | Kidney Transplantation | Correlated with the increased neutropenia risk in patients (compare with genotype CC) | [ 3] | |
Genetic Polymorphism | rs1678387 | ||||
Site of GPD | chr13:95065652 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | T>C | ||||
Minor Allele Frequency | T=0.0978/490 (Global) | ||||
Allele T | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Bisphosphonates | Drug Info | Osteonecrosis | Correlated with the increased likelihood of osteonecrosis in patients (compare with allele C) | [ 4] | |
Genetic Polymorphism | rs16950650 | ||||
Site of GPD | chr13:95123178 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>T | ||||
Minor Allele Frequency | T=0.0437/219 (Global) | ||||
Genotype CT | Click to Show/Hide the Full List of Affected Drugs: 2 Drugs in Total | ||||
Irinotecan | Drug Info | Small Cell Carcinoma | Correlated with the decreased overall survival in patients (compare with genotype CC) | [ 5] | |
Cisplatin | Drug Info | Small Cell Carcinoma | Correlated with the decreased overall survival in patients (compare with genotype CC) | [ 5] | |
Genetic Polymorphism | rs17268282 | ||||
Site of GPD | chr13:95273060 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | G>T | ||||
Minor Allele Frequency | T=0.0389/195 (Global) | ||||
Allele T | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Furosemide | Drug Info | Heart Failure | Correlated with the increased drug response in patients (compare with allele G) | [ 6] | |
Genetic Polymorphism | rs7317112 | ||||
Site of GPD | chr13:95271269 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | A>G | ||||
Minor Allele Frequency | G=0.3922/1964 (Global) | ||||
Genotype AA | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Methotrexate | Drug Info | Precursor Cell Lymphoblastic Leukemia-Lymphoma | Correlated with the increased mucositis risk in patients (compare with genotypes AG + GG) | [ 7] | |
Genetic Polymorphism | rs9561765 | ||||
Site of GPD | chr13:95030989 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | G>A | ||||
Minor Allele Frequency | A=0.1088/545 (Global) | ||||
Genotype AG | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Imatinib | Drug Info | Gastrointestinal Stromal Tumors | Correlated with the increased drug response in patients (compare with genotype AA) | [ 8] | |
Genetic Polymorphism | rs9561778 | ||||
Site of GPD | chr13:95061461 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | G>A / G>T | ||||
Minor Allele Frequency | T=0.1633/818 (Global) | ||||
Allele T | Click to Show/Hide the Full List of Affected Drugs: 3 Drugs in Total | ||||
Fluorouracil | Drug Info | Breast Neoplasm | Correlated with the increased adverse drug reaction risk in patients (compare with allele G) | [ 9] | |
Doxorubicin | Drug Info | Breast Neoplasm | Correlated with the increased adverse drug reaction risk in patients (compare with allele G) | [ 9] | |
Cyclophosphamide | Drug Info | Breast Neoplasm | Correlated with the increased adverse drug reaction risk in patients (compare with allele G); Correlated with the increased gastrointestinal toxicity risk in patients (compare with allele G); Correlated with the increased severity of neutropenia in patients (compare with allele G) | [ 9] | |
Genetic Polymorphism | rs1751034 | ||||
Site of GPD | chr13:95062722 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>G / C>T | ||||
Minor Allele Frequency | C=0.2057/1030 (Global) | ||||
Genotype TT | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Tenofovir | Drug Info | HIV Infection | Correlated with the increased drug renal clearance, and lower the total area under the plasma concentration-time curve (AUC) in patients (compare with genotypes CC + CT) | [ 10] | |
Genotypes CC + CT | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Tenofovir | Drug Info | HIV Infection | Correlated with the increased intracellular tenofovir diphosphate (tFV-DP) concentrations in patients (compare with Genotype TT) | [ 11] | |
Genetic Polymorphism | rs3742106 | ||||
Site of GPD | chr13:95021537 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | A>C | ||||
Minor Allele Frequency | C=0.4149/2078 (Global) | ||||
Genotypes AC + CC | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Tenofovir | Drug Info | HIV Infection | Correlated with the increased drug concentrations in patients (compare with genotype AA) | [ 12] | |
Genetic Polymorphism | rs3765534 | ||||
Site of GPD | chr13:95163161 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | C>T | ||||
Minor Allele Frequency | T=0.0312/156 (Global) | ||||
Genotype TT | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Mercaptopurine | Drug Info | Inflammatory Bowel Diseases | Correlated with the increased sensitivity to drug in nA18967 cells (compare with genotype CC) | [ 13] | |
Genotypes CT + TT | Click to Show/Hide the Full List of Affected Drugs: 2 Drugs in Total | ||||
Azathioprine | Drug Info | Inflammatory Bowel Diseases | Correlated with the increased likelihood of leukopenia in patients (compare with genotype CC) | [ 14] | |
Mercaptopurine | Drug Info | Inflammatory Bowel Diseases | Correlated with the increased likelihood of leukopenia in patients (compare with genotype CC) | [ 14] | |
Genetic Polymorphism | rs9516519 | ||||
Site of GPD | chr13:95020203 (GRCh38.p12) | ||||
GPD Type | SNP | ||||
Allele(s) in dbSNP | T>C / T>G | ||||
Minor Allele Frequency | G=0.0591/296 (Global) | ||||
Genotypes GG + GT | Click to Show/Hide the Full List of Affected Drugs: 1 Drugs in Total | ||||
Methotrexate | Drug Info | Acute B-Cell Leukemia | Correlated with the decreased drug plasma level in patients (compare with Genotype TT); Correlated with the decreased toxicity risk in patients (compare with Genotype TT) | [ 15] | |
References | |||||
1 | A Single-Nucleotide Polymorphism in ABCC4 Is Associated with Tenofovir-Related Beta2-Microglobulinuria in Thai Patients with HIV-1 Infection. PLoS One. 2016 Jan 25;11(1):e0147724. | ||||
2 | Influence of PTGS1, PTGFR, and MRP4 genetic variants on intraocular pressure response to latanoprost in Chinese primary open-angle glaucoma patients. Eur J Clin Pharmacol. 2015 Jan;71(1):43-50. | ||||
3 | Multidrug resistance-associated protein 4 (MRP4) controls ganciclovir intracellular accumulation and contributes to ganciclovir-induced neutropenia in renal transplant patients. Pharmacol Res. 2016 Sep;111:501-508. | ||||
4 | Genomewide pharmacogenetics of bisphosphonate-induced osteonecrosis of the jaw: the role of RBMS3. Oncologist. 2012;17(2):279-87. | ||||
5 | A genome-wide association study of survival in small-cell lung cancer patients treated with irinotecan plus cisplatin chemotherapy. Pharmacogenomics J. 2014 Feb;14(1):20-7. | ||||
6 | A pharmacogenetic investigation of intravenous furosemide in decompensated heart failure: a meta-analysis of three clinical trials. Pharmacogenomics J. 2017 Mar;17(2):192-200. | ||||
7 | Genetic and metabolic determinants of methotrexate-induced mucositis in pediatric acute lymphoblastic leukemia. Pharmacogenomics J. 2015 Jun;15(3):248-54. | ||||
8 | Polymorphisms in OCTN1 and OCTN2 transporters genes are associated with prolonged time to progression in unresectable gastrointestinal stromal tumours treated with imatinib therapy. Pharmacol Res. 2013 Feb;68(1):1-6. | ||||
9 | Association study of genetic polymorphism in ABCC4 with cyclophosphamide-induced adverse drug reactions in breast cancer patients. J Hum Genet. 2009 Oct;54(10):564-71. | ||||
10 | The effect of lopinavir/ritonavir on the renal clearance of tenofovir in HIV-infected patients. Clin Pharmacol Ther. 2008 Feb;83(2):265-72. | ||||
11 | Clinical and genetic determinants of intracellular tenofovir diphosphate concentrations in HIV-infected patients. J Acquir Immune Defic Syndr. 2008 Mar 1;47(3):298-303. | ||||
12 | Influence of ABCC2 and ABCC4 polymorphisms on tenofovir plasma concentrations in Thai HIV-infected patients. Antimicrob Agents Chemother. 2015;59(6):3240-5. | ||||
13 | Transporter-mediated protection against thiopurine-induced hematopoietic toxicity. Cancer Res. 2008 Jul 1;68(13):4983-9. | ||||
14 | The multidrug-resistance protein 4 polymorphism is a new factor accounting for thiopurine sensitivity in Japanese patients with inflammatory bowel disease. J Gastroenterol. 2010 Oct;45(10):1014-21. | ||||
15 | Polymorphisms in the methotrexate transport pathway: a new tool for MTX plasma level prediction in pediatric acute lymphoblastic leukemia. Pharmacogenet Genomics. 2013 Feb;23(2):53-61. |
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