Modelled Stucture
Method: Homology modeling
Teplate PDB: 6V4D_A
Identity: 78.447%
Minimized Score: -1082.495
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0121 Transporter Info | ||||
| Gene Name | SLC17A8 | ||||
| Protein Name | Vesicular glutamate transporter 3 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
|
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc17a8 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6V4D_A Sequence Length: 527 Identity: 75.947% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1057.89 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -1.7 ± 0.33 Residues in Favored Region: 504 Ramachandran favored: 96.00% Number of Outliers: 2 Ramachandran outliers: 0.38% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.76 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Inter-species Structural Differences (ISD) | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Slc17a8 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6V4D_A Sequence Length: 514 Identity: 78.641% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1064.634 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -1.81 ± 0.33 Residues in Favored Region: 496 Ramachandran favored: 96.88% Number of Outliers: 3 Ramachandran outliers: 0.59% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.76 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
| Inter-species Structural Differences (ISD) | |||||
| Danio rerio (Zebrafish) | |||||
| Gene Name | slc17a8 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6V4D_A Sequence Length: 514 Identity: 79.07% |
||||
| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1066.499 kcal/mol | |||
| Ramachandra Favored |
Medium |
||||
| QMEANBrane Quality |
Medium |
||||
| Ramachandran Plot |
Ramz Z Score: -1.49 ± 0.34 Residues in Favored Region: 491 Ramachandran favored: 95.90% Number of Outliers: 4 Ramachandran outliers: 0.78% |
||||
| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.76 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
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