Modelled Stucture
Method: Homology modeling
Teplate PDB: 6OH4_A
Identity: 91.395%
Minimized Score: -940.824
Detail: Structure Info
General Information of Drug Transporter (DT) | |||||
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DT ID | DTD0287 Transporter Info | ||||
Gene Name | SLC35A1 | ||||
Protein Name | CMP-sialic acid transporter | ||||
Gene ID | |||||
UniProt ID | |||||
3D Structure |
Modelled Stucture Method: Homology modeling Teplate PDB: 6OH4_A Identity: 91.395% Minimized Score: -940.824 Detail: Structure Info |
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Inter-species Structural Differences (ISD) | |||||
Mus musculus (Mouse) | |||||
Gene Name | Slc35a1 | ||||
UniProt ID | |||||
UniProt Entry | |||||
3D Structure | |||||
Click to Save PDB File in PDB Format | |||||
Experimental Structures of This Model Oganism | |||||
PDB ID | Scanning Method | Resolution | Expression System | Details | Ref |
6OH2 | X-ray | 2.58 Å | Komagataella pastoris | [ 1] | |
Structure | |||||
Click to Save PDB File in TXT Format | |||||
Corresponding chain | A | ||||
Sequence Length | 1-322 | Mutation | No | ||
6OH4 | X-ray | 3.38 Å | Komagataella pastoris | [ 1] | |
Structure | |||||
Click to Save PDB File in TXT Format | |||||
Corresponding chain | A/B | ||||
Sequence Length | 1-336 | Mutation | No | ||
Cricetulus griseus (Chinese hamster) | |||||
Gene Name | SLC35A1 | ||||
UniProt ID | |||||
UniProt Entry | |||||
3D Structure |
Method: Homology modeling Teplate PDB: 6OH4_A Sequence Length: 336 Identity: 95.238% |
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Click to Save PDB File in TXT Format | |||||
Performance | Minimized Score | -915.223 kcal/mol | |||
Ramachandra Favored |
Excellent |
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QMEANBrane Quality |
High |
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Ramachandran Plot |
Ramz Z Score: -0.21 ± 0.41 Residues in Favored Region: 332 Ramachandran favored: 99.40% Number of Outliers: 0 Ramachandran outliers: 0.00% |
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Click to Save Ramachandran Plot in PNG Format | |||||
Local Quality |
QMEANBrane Score: 0.81 |
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Click to Save Local Quality Plot in PNG Format | |||||
References | |||||
1 | Structural basis for mammalian nucleotide sugar transport. Elife. 2019 Apr 15;8:e45221. doi: 10.7554/eLife.45221. | ||||
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