Detail Information of Inter-species Structural Difference

General Information of Drug Transporter (DT)
DT ID DTD0528 Transporter Info
Gene Name SCN8A
Protein Name Voltage-gated sodium channel alpha Nav1.6
Gene ID
6334
UniProt ID
O95788
3D Structure

Modelled Stucture

Method: Homology modeling

Teplate PDB: 6J8E_A

Identity: 75.025%

Minimized Score: -3266.391

Detail: Structure Info

Inter-species Structural Differences (ISD)
Mus musculus (Mouse)
        Gene Name Scn8a
        UniProt ID
Q9WTU3
        UniProt Entry
SCN8A_MOUSE
        3D Structure

Crystallisation Method: X-ray

Expression System: Escherichia coli

PDB ID: 3WFN

Corresponding Chain: B/C/D/E

Sequence Length: 1893-1914
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Inter-species Structural Differences (ISD)
Rattus norvegicus (Rat)
        Gene Name Scn8a
        UniProt ID
O88420
        UniProt Entry
SCN8A_RAT
        3D Structure

Method: Homology modeling

Teplate PDB: 6J8E_A

Sequence Length: 1977

Identity: 74.445%

Click to Save PDB File in TXT Format
        Performance Minimized Score -3192.031 kcal/mol
Ramachandra Favored

Medium
QMEANBrane Quality

Medium
        Ramachandran Plot

Ramz Z Score: -1.34 ± 0.17

Residues in Favored Region: 1887

Ramachandran favored: 95.54%

Number of Outliers: 25

Ramachandran outliers: 1.27%
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        Local Quality

QMEANBrane Score: 0.73
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