Modelled Stucture
Method: Homology modeling
Teplate PDB: 4I9W_A_A
Identity: 97.683%
Minimized Score: -641.691
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0547 Transporter Info | ||||
| Gene Name | KCNK4 | ||||
| Protein Name | Potassium channel subfamily K member 4 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Kcnk4 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6PIS_A Sequence Length: 278 Identity: 98.561% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -599.12 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -0.77 ± 0.45 Residues in Favored Region: 269 Ramachandran favored: 97.46% Number of Outliers: 0 Ramachandran outliers: 0.00% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.81 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Experimental Structures of This Model Oganism | |||||
| PDB ID | Scanning Method | Resolution | Expression System | Details | Ref |
| 6PIS | X-ray | 2.77 Å | Komagataella pastoris | [ 1] | |
| Structure | |||||
| Click to Save PDB File in TXT Format | |||||
| Corresponding chain | A/B | ||||
| Sequence Length | 1-275 | Mutation | Yes | ||
| Inter-species Structural Differences (ISD) | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Kcnk4 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6PIS_A Sequence Length: 278 Identity: 93.885% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -625.118 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -1.6 ± 0.46 Residues in Favored Region: 267 Ramachandran favored: 96.74% Number of Outliers: 0 Ramachandran outliers: 0.00% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.81 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| References | |||||
| 1 | The mechanosensitive ion channel TRAAK is localized to the mammalian node of Ranvier. Elife. 2019 Nov 1;8:e50403. doi: 10.7554/eLife.50403. | ||||
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