Detail Information of Mutation-induced Spatial Variation
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0001 Transporter Info | ||||
| Gene Name | ABCC1 | ||||
| Transporter Name | Multidrug resistance-associated protein 1 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| Mutation-induced Spatial Variation (MSV) of This DT | |||||
| SNP ID | |||||
| Variation Type | T/A | ||||
| Site of GPD | chr16:16134392 (GRCh38.p12) | ||||
| Allele(s) in dbSNP | A>G | ||||
| Minor Allele Frequency | N.A. | ||||
| GPD Details | GPD Info | ||||
| Structure Details | |||||
| Modeling Method | Homology modeling | ||||
| Template PDB | 6UY0_A | Identity | 90.66% | ||
| Model Performance | Minimized Score | -3608.091 kcal/mol | |||
| Ramachandra Favored |
Excellent |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Ramz Z Score | -0.61 ± 0.19 | ||||
| Residues in Favored Region | 1503 | Percentage of Favorable Residues | 98.30% | ||
| Number of Outliers | 4 | Ramachandran outliers | 0.26% | ||
| Local Quality |
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| Click to Save Local Quality Plot in PNG Format | |||||
| QMEANBrane Score | 0.78 | ||||
| SNP ID | |||||
| Variation Type | G/V | ||||
| Site of GPD | chr16:16079375 (GRCh38.p12) | ||||
| Allele(s) in dbSNP | G>T | ||||
| Minor Allele Frequency | T=0.0154/77 | ||||
| GPD Details | GPD Info | ||||
| Structure Details | |||||
| Modeling Method | Homology modeling | ||||
| Template PDB | 6UY0_A | Identity | 90.66% | ||
| Model Performance | Minimized Score | -3563.703 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Ramz Z Score | -0.91 ± 0.19 | ||||
| Residues in Favored Region | 1494 | Percentage of Favorable Residues | 97.71% | ||
| Number of Outliers | 3 | Ramachandran outliers | 0.20% | ||
| Local Quality |
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| Click to Save Local Quality Plot in PNG Format | |||||
| QMEANBrane Score | 0.77 | ||||
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