Detail Information of Mutation-induced Spatial Variation
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0051 Transporter Info | ||||
| Gene Name | ABCB5 | ||||
| Transporter Name | ATP-binding cassette sub-family B member 5 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| Mutation-induced Spatial Variation (MSV) of This DT | |||||
| SNP ID | |||||
| Variation Type | T/N | ||||
| Site of GPD | chr7:20643261 (GRCh38.p12) | ||||
| Allele(s) in dbSNP | C>T | ||||
| Minor Allele Frequency | T=0.0705/353 | ||||
| GPD Details | GPD Info | ||||
| Structure Details | |||||
| Modeling Method | Homology modeling | ||||
| Template PDB | 6QEX_A | Identity | 55.788% | ||
| Model Performance | Minimized Score | -2868.014 kcal/mol | |||
| Ramachandra Favored |
Excellent |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Ramz Z Score | -0.71 ± 0.22 | ||||
| Residues in Favored Region | 1201 | Percentage of Favorable Residues | 98.20% | ||
| Number of Outliers | 4 | Ramachandran outliers | 0.33% | ||
| Local Quality |
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| Click to Save Local Quality Plot in PNG Format | |||||
| QMEANBrane Score | 0.8 | ||||
| SNP ID | |||||
| Variation Type | T/I | ||||
| Site of GPD | chr7:20643261 (GRCh38.p12) | ||||
| Allele(s) in dbSNP | C>T | ||||
| Minor Allele Frequency | T=0.0705/353 | ||||
| GPD Details | GPD Info | ||||
| Structure Details | |||||
| Modeling Method | Homology modeling | ||||
| Template PDB | 6QEX_A | Identity | 55.788% | ||
| Model Performance | Minimized Score | -2988.001 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Ramz Z Score | -0.66 ± 0.22 | ||||
| Residues in Favored Region | 1198 | Percentage of Favorable Residues | 97.96% | ||
| Number of Outliers | 5 | Ramachandran outliers | 0.41% | ||
| Local Quality |
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| Click to Save Local Quality Plot in PNG Format | |||||
| QMEANBrane Score | 0.79 | ||||
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