Detail Information of Mutation-induced Spatial Variation
General Information of Drug Transporter (DT) | |||||
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DT ID | DTD0100 Transporter Info | ||||
Gene Name | SLC16A1 | ||||
Transporter Name | Monocarboxylate transporter 1 | ||||
Gene ID | |||||
UniProt ID | |||||
Mutation-induced Spatial Variation (MSV) of This DT | |||||
SNP ID | |||||
Variation Type | D/E | ||||
Site of GPD | chr1:112913924 (GRCh38.p12) | ||||
Allele(s) in dbSNP | A>T | ||||
Minor Allele Frequency | A=0.3233/1619 | ||||
GPD Details | GPD Info | ||||
Structure Details | |||||
Modeling Method | Homology modeling | ||||
Template PDB | 6LYY_A | Identity | 99.8% | ||
Model Performance | Minimized Score | -1079.301 kcal/mol | |||
Ramachandra Favored |
Medium |
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QMEANBrane Quality |
Medium |
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Ramachandran Plot | |||||
Click to Save Ramachandran Plot in PNG Format | |||||
Ramz Z Score | -1.06 ± 0.35 | ||||
Residues in Favored Region | 488 | Percentage of Favorable Residues | 97.99% | ||
Number of Outliers | 2 | Ramachandran outliers | 0.40% | ||
Local Quality | |||||
Click to Save Local Quality Plot in PNG Format | |||||
QMEANBrane Score | 0.78 | ||||
PDB ID | Scanning Method | Resolution | Mutation Sites | Details | Ref |
7DA5 | EM | 3.3 Å | D309N | [1] | |
Structure | |||||
Expression System | Homo sapiens | ||||
Corresponding chain | A | ||||
Sequence Length | 1-500 | Mutation | Yes | ||
References | |||||
1 | Structural basis of human monocarboxylate transporter 1 inhibition by anti-cancer drug candidates. Cell. 2021 Jan 21;184(2):370-383.e13. | ||||
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