Detail Information of Mutation-induced Spatial Variation
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0267 Transporter Info | ||||
| Gene Name | SLC2A9 | ||||
| Transporter Name | Glucose transporter type 9 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| Mutation-induced Spatial Variation (MSV) of This DT | |||||
| SNP ID | |||||
| Variation Type | V/I | ||||
| Site of GPD | chr4:9920543 (GRCh38.p12) | ||||
| Allele(s) in dbSNP | C>T | ||||
| Minor Allele Frequency | T=0.1855/831 | ||||
| GPD Details | GPD Info | ||||
| Structure Details | |||||
| Modeling Method | Homology modeling | ||||
| Template PDB | 4YBQ_A | Identity | 44.937% | ||
| Model Performance | Minimized Score | -1119.971 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Ramz Z Score | -1.19 ± 0.35 | ||||
| Residues in Favored Region | 455 | Percentage of Favorable Residues | 97.01% | ||
| Number of Outliers | 4 | Ramachandran outliers | 0.85% | ||
| Local Quality |
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| Click to Save Local Quality Plot in PNG Format | |||||
| QMEANBrane Score | 0.81 | ||||
| SNP ID | |||||
| Variation Type | R/H | ||||
| Site of GPD | chr4:9920506 (GRCh38.p12) | ||||
| Allele(s) in dbSNP | C>T | ||||
| Minor Allele Frequency | T=0.1494/1943 | ||||
| GPD Details | GPD Info | ||||
| Structure Details | |||||
| Modeling Method | Homology modeling | ||||
| Template PDB | 4YBQ_A | Identity | 45.148% | ||
| Model Performance | Minimized Score | -1075.356 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Ramz Z Score | -0.99 ± 0.35 | ||||
| Residues in Favored Region | 453 | Percentage of Favorable Residues | 96.59% | ||
| Number of Outliers | 4 | Ramachandran outliers | 0.85% | ||
| Local Quality |
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| Click to Save Local Quality Plot in PNG Format | |||||
| QMEANBrane Score | 0.81 | ||||
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