Detail Information of Transcriptional Regulations

General Information of Drug Transporter (DT)
DT ID DTD0123 Transporter Info
Gene Name SLC18A1
Transporter Name Vesicular amine transporter 1
Gene ID
6570
UniProt ID
P54219

Transcriptional Regulation of This DT (TSR)

TF Superclass 1: Basic domains

      Class 1.1: Basic leucine zipper factors

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        CEBPB 

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       Transcriptional Phenomenon 1

 Direct binding to SLC18A1 gene [1]

TF Protein Name

 CCAAT/enhancer-binding protein beta Transcription Factor Info

Tissue

 Blood

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 CCAAT/enhancer-binding protein beta (CEBPB) can directly bind to the SLC18A1 gene, which in turn affects the expression or function of the drug transporter Vesicular amine transporter 1.

      Class 1.2: Basic helix-loop-helix factors

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        TCF12 

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       Transcriptional Phenomenon 1

 Direct binding to SLC18A1 gene [2]

TF Protein Name

 Transcription factor 12 Transcription Factor Info

Tissue

 Blood; Brain

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Transcription factor 12 (TCF12) can directly bind to the SLC18A1 gene, which in turn affects the expression or function of the drug transporter Vesicular amine transporter 1.

        TCF3 

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       Transcriptional Phenomenon 1

 Direct binding to SLC18A1 gene [3]

TF Protein Name

 Transcription factor E2-alpha Transcription Factor Info

Tissue

 Blood

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Transcription factor E2-alpha (TCF3) can directly bind to the SLC18A1 gene, which in turn affects the expression or function of the drug transporter Vesicular amine transporter 1.

      Class 1.3: Basic helix-span-helix factors

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        TFAP2C 

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       Transcriptional Phenomenon 1

 Direct binding to SLC18A1 gene [4]

TF Protein Name

 Transcription factor AP-2 gamma Transcription Factor Info

Tissue

 Breast; Skin

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Transcription factor AP-2 gamma (TFAP2C) can directly bind to the SLC18A1 gene, which in turn affects the expression or function of the drug transporter Vesicular amine transporter 1.

TF Superclass 2: Zinc-coordinating DNA-binding domains

      Class 2.2: Other C4 zinc finger-type factors

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        GATA1 

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       Transcriptional Phenomenon 1

 Direct binding to SLC18A1 gene [1]

TF Protein Name

 Erythroid transcription factor Transcription Factor Info

Tissue

 Blood; Bone marrow

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Erythroid transcription factor (GATA1) can directly bind to the SLC18A1 gene, which in turn affects the expression or function of the drug transporter Vesicular amine transporter 1.

        GATA3 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Repression of SLC18A1 gene in adrenal gland pheochromocytoma condition [5]

TF Protein Name

 Trans-acting T-cell-specific transcription factor GATA-3 Transcription Factor Info

Studied Phenotype

 Adrenal gland pheochromocytoma [ICD11: 2D11.1]

Tissue

 Adrenal gland

Related DT Changes

 Down regulating

Experimental Material

 Rat adrenal gland pheochromocytoma cells (PC12)

Detailed Description

 Trans-acting T-cell-specific transcription factor GATA-3 (GATA3) has been reported to repress the transcription of SLC18A1 gene in adrenal gland pheochromocytoma condition, which leads to a decreased expression of the drug transporter Vesicular amine transporter 1.

      Class 2.3: C2H2 zinc finger factors

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        CTCF 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC18A1 gene [4]

TF Protein Name

 Transcriptional repressor CTCF Transcription Factor Info

Tissue

 Brain

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Transcriptional repressor CTCF (CTCF) can directly bind to the SLC18A1 gene, which in turn affects the expression or function of the drug transporter Vesicular amine transporter 1.

        MAZ 

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       Transcriptional Phenomenon 1

 Direct binding to SLC18A1 gene [2]

TF Protein Name

 Myc-associated zinc finger protein Transcription Factor Info

Tissue

 Bone marrow; Lung

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Myc-associated zinc finger protein (MAZ) can directly bind to the SLC18A1 gene, which in turn affects the expression or function of the drug transporter Vesicular amine transporter 1.

        ZNF263 

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       Transcriptional Phenomenon 1

 Direct binding to SLC18A1 gene [3]

TF Protein Name

 Zinc finger protein 263 Transcription Factor Info

Tissue

 Kidney

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Zinc finger protein 263 (ZNF263) can directly bind to the SLC18A1 gene, which in turn affects the expression or function of the drug transporter Vesicular amine transporter 1.

TF Superclass 3: Helix-turn-helix domains

      Class 3.5: Tryptophan cluster factors

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        FLI1 

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       Transcriptional Phenomenon 1

 Direct binding to SLC18A1 gene [1]

TF Protein Name

 Friend leukemia integration 1 transcription factor Transcription Factor Info

Tissue

 Blood; Mesenchymal

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Friend leukemia integration 1 transcription factor (FLI1) can directly bind to the SLC18A1 gene, which in turn affects the expression or function of the drug transporter Vesicular amine transporter 1.

        IRF1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC18A1 gene [4]

TF Protein Name

 Interferon regulatory factor 1 Transcription Factor Info

Tissue

 Blood

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Interferon regulatory factor 1 (IRF1) can directly bind to the SLC18A1 gene, which in turn affects the expression or function of the drug transporter Vesicular amine transporter 1.

        SPI1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC18A1 gene [2]

TF Protein Name

 Transcription factor PU.1 Transcription Factor Info

Tissue

 Blood; Bone marrow; Brain; Breast; Embryo; Foreskin; Heart; Intestine; Kidney; Lung; Muscle; Penis; Renal cortex; Renal pelvis; Skin; Spinal cord; Umbilical cord blood

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Transcription factor PU.1 (SPI1) can directly bind to the SLC18A1 gene, which in turn affects the expression or function of the drug transporter Vesicular amine transporter 1.

TF Superclass 6: Immunoglobulin fold

      Class 6.2: STAT domain factors

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        STAT1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC18A1 gene [3]

TF Protein Name

 Signal transducer and activator of transcription 1-alpha/beta Transcription Factor Info

Tissue

 Blood

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Signal transducer and activator of transcription 1-alpha/beta (STAT1) can directly bind to the SLC18A1 gene, which in turn affects the expression or function of the drug transporter Vesicular amine transporter 1.
References
1 NCBI GEO: archive for functional genomics data sets--update. Nucleic Acids Res. 2013 Jan;41(D1):D991-5.
2 Closure of the NCBI SRA and implications for the long-term future of genomics data storage. Genome Biol. 2011;12(3):402.
3 The Encyclopedia of DNA elements (ENCODE): data portal update. Nucleic Acids Res. 2018 Jan 4;46(D1):D794-D801
4 hTFtarget: A Comprehensive Database for Regulations of Human Transcription Factors and Their Targets. Genomics Proteomics Bioinformatics. 2020 Apr;18(2):120-147. (ID:ENSG00000036565)
5 Reconstruction of the gene regulatory network involved in the sonic hedgehog pathway with a potential role in early development of the mouse brain. PLoS Comput Biol. 2014 Oct 9;10(10):e1003884.

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