Detail Information of Transcriptional Regulations

General Information of Drug Transporter (DT)
DT ID DTD0353 Transporter Info
Gene Name SLC40A1
Transporter Name Iron-regulated transporter 1
Gene ID
30061
UniProt ID
Q9NP59

Transcriptional Regulation of This DT (TSR)

TF Superclass 1: Basic domains

      Class 1.1: Basic leucine zipper factors

Click to Show/Hide the Full List of 5 TF(s) Regulating This DT

        BACH1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Repression of SLC40A1 gene in ferroptosis condition [1]

TF Protein Name

 Transcription regulator protein BACH1 Transcription Factor Info

Studied Phenotype

 Ferroptosis [ICD11: N.A.]

Tissue

 Embryo

Related DT Changes

 Down regulating

Experimental Material

 C57BL/6J Bach1KO mice

Detailed Description

 Transcription regulator protein BACH1 (BACH1) has been reported to repress the transcription of SLC40A1 gene in ferroptosis condition, which leads to a decreased expression of the drug transporter Iron-regulated transporter 1.

        CEBPB 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC40A1 gene [2]

TF Protein Name

 CCAAT/enhancer-binding protein beta Transcription Factor Info

Tissue

 Blood

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 CCAAT/enhancer-binding protein beta (CEBPB) can directly bind to the SLC40A1 gene, which in turn affects the expression or function of the drug transporter Iron-regulated transporter 1.

        CEBPD 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC40A1 gene [3]

TF Protein Name

 CCAAT/enhancer-binding protein delta Transcription Factor Info

Tissue

 Aorta

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 CCAAT/enhancer-binding protein delta (CEBPD) can directly bind to the SLC40A1 gene, which in turn affects the expression or function of the drug transporter Iron-regulated transporter 1.

        CREB1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC40A1 gene [4]

TF Protein Name

 Cyclic AMP-responsive element-binding protein 1 Transcription Factor Info

Tissue

 Liver

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Cyclic AMP-responsive element-binding protein 1 (CREB1) can directly bind to the SLC40A1 gene, which in turn affects the expression or function of the drug transporter Iron-regulated transporter 1.

        NFE2L2 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Repression of SLC40A1 gene in ovarian endometrioid adenocarcinoma condition [5]

TF Protein Name

 Nuclear factor erythroid 2-related factor 2 Transcription Factor Info

Affected Drug/Substrate

 Cisplatin

Studied Phenotype

 Ovarian endometrioid adenocarcinoma [ICD11: 2C73.01]

Tissue

 Ovary

Related DT Changes

 Down regulating

Experimental Material

 Human ovarian endometrioid adenocarcinoma cells (A2780)

Detailed Description

 Nuclear factor erythroid 2-related factor 2 (NFE2L2) has been reported to repress the transcription of SLC40A1 gene in ovarian endometrioid adenocarcinoma condition, which leads to a decreased expression of the drug transporter Iron-regulated transporter 1.

      Class 1.2: Basic helix-loop-helix factors

Click to Show/Hide the Full List of 1 TF(s) Regulating This DT

        EPAS1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Activation of SLC40A1 gene in health condition [6]

TF Protein Name

 Endothelial PAS domain-containing protein 1 Transcription Factor Info

Studied Phenotype

 Heallth [ICD11: N.A]

Related DT Changes

 Up regulating

Detailed Description

 Endothelial PAS domain-containing protein 1 (EPAS1), influenced by the generated by Lactobacillus reuteri, has been reported to activate the transcription of SLC40A1 gene in health condition, which leads to an increased expression of the drug transporter Iron-regulated transporter 1.

TF Superclass 2: Zinc-coordinating DNA-binding domains

      Class 2.2: Other C4 zinc finger-type factors

Click to Show/Hide the Full List of 1 TF(s) Regulating This DT

        GATA1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC40A1 gene [3]

TF Protein Name

 Erythroid transcription factor Transcription Factor Info

Tissue

 Blood; Bone marrow; Liver; Umbilical cord blood

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Erythroid transcription factor (GATA1) can directly bind to the SLC40A1 gene, which in turn affects the expression or function of the drug transporter Iron-regulated transporter 1.

      Class 2.3: C2H2 zinc finger factors

Click to Show/Hide the Full List of 2 TF(s) Regulating This DT

        MAZ 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC40A1 gene [4]

TF Protein Name

 Myc-associated zinc finger protein Transcription Factor Info

Tissue

 Blood; Bone marrow; Liver; Lung

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Myc-associated zinc finger protein (MAZ) can directly bind to the SLC40A1 gene, which in turn affects the expression or function of the drug transporter Iron-regulated transporter 1.

        PRDM14 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC40A1 gene [7]

TF Protein Name

 PR domain zinc finger protein 14 Transcription Factor Info

Tissue

 Embryo

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 PR domain zinc finger protein 14 (PRDM14) can directly bind to the SLC40A1 gene, which in turn affects the expression or function of the drug transporter Iron-regulated transporter 1.

TF Superclass 3: Helix-turn-helix domains

      Class 3.3: Fork head / winged helix factors

Click to Show/Hide the Full List of 3 TF(s) Regulating This DT

        FOXA1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC40A1 gene [7]

TF Protein Name

 Hepatocyte nuclear factor 3-alpha Transcription Factor Info

Tissue

 Breast; Embryo; Liver; Lung; Prostate

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Hepatocyte nuclear factor 3-alpha (FOXA1) can directly bind to the SLC40A1 gene, which in turn affects the expression or function of the drug transporter Iron-regulated transporter 1.

        FOXA2 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC40A1 gene [2]

TF Protein Name

 Hepatocyte nuclear factor 3-beta Transcription Factor Info

Tissue

 Colon

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Hepatocyte nuclear factor 3-beta (FOXA2) can directly bind to the SLC40A1 gene, which in turn affects the expression or function of the drug transporter Iron-regulated transporter 1.

        FOXP1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC40A1 gene [7]

TF Protein Name

 Forkhead box protein P1 Transcription Factor Info

Tissue

 Prostate

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Forkhead box protein P1 (FOXP1) can directly bind to the SLC40A1 gene, which in turn affects the expression or function of the drug transporter Iron-regulated transporter 1.

      Class 3.4: Heat shock factors

Click to Show/Hide the Full List of 1 TF(s) Regulating This DT

        HSF1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Repression of SLC40A1 gene in ferroptosis condition [8]

TF Protein Name

 Heat shock factor protein 1 Transcription Factor Info

Studied Phenotype

 Ferroptosis [ICD11: N.A.]

Tissue

 Heart

Related DT Changes

 Down regulating

Experimental Material

 Hsf1 mice

Detailed Description

 Heat shock factor protein 1 (HSF1) has been reported to repress the transcription of SLC40A1 gene in ferroptosis condition, which leads to a decreased expression of the drug transporter Iron-regulated transporter 1.

      Class 3.5: Tryptophan cluster factors

Click to Show/Hide the Full List of 2 TF(s) Regulating This DT

        FLI1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC40A1 gene [4]

TF Protein Name

 Friend leukemia integration 1 transcription factor Transcription Factor Info

Tissue

 Blood; Mesenchymal; Vein

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Friend leukemia integration 1 transcription factor (FLI1) can directly bind to the SLC40A1 gene, which in turn affects the expression or function of the drug transporter Iron-regulated transporter 1.

        MYB 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC40A1 gene [3]

TF Protein Name

 Transcriptional activator Myb Transcription Factor Info

Tissue

 Blood

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Transcriptional activator Myb (MYB) can directly bind to the SLC40A1 gene, which in turn affects the expression or function of the drug transporter Iron-regulated transporter 1.

TF Superclass 6: Immunoglobulin fold

      Class 6.3: p53 domain factors

Click to Show/Hide the Full List of 1 TF(s) Regulating This DT

        TP53 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Activation of SLC40A1 gene in atherosclerosis condition [9]

TF Protein Name

 Cellular tumor antigen p53 Transcription Factor Info

Studied Phenotype

 Atherosclerosis [ICD11: BD40]

Tissue

 Liver

Related DT Changes

 Up regulating

Experimental Material

 Human hepatoblastoma cells (HepG2)

Detailed Description

 Cellular tumor antigen p53 (TP53) has been reported to activate the transcription of SLC40A1 gene in atherosclerosis condition, which leads to an increased expression of the drug transporter Iron-regulated transporter 1.

      Class 6.7: Grainyhead domain factors

Click to Show/Hide the Full List of 1 TF(s) Regulating This DT

        GRHL2 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC40A1 gene [2]

TF Protein Name

 Grainyhead-like protein 2 homolog Transcription Factor Info

Tissue

 Breast; Bronchus

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Grainyhead-like protein 2 homolog (GRHL2) can directly bind to the SLC40A1 gene, which in turn affects the expression or function of the drug transporter Iron-regulated transporter 1.
References
1 Ferroptosis is controlled by the coordinated transcriptional regulation of glutathione and labile iron metabolism by the transcription factor BACH1. J Biol Chem. 2020 Jan 3;295(1):69-82.
2 hTFtarget: A Comprehensive Database for Regulations of Human Transcription Factors and Their Targets. Genomics Proteomics Bioinformatics. 2020 Apr;18(2):120-285. (ID:ENSG00000138449)
3 NCBI GEO: archive for functional genomics data sets--update. Nucleic Acids Res. 2013 Jan;41(D1):D991-5.
4 Closure of the NCBI SRA and implications for the long-term future of genomics data storage. Genome Biol. 2011;12(3):402.
5 Nrf2 induces cisplatin resistance via suppressing the iron export related gene SLC40A1 in ovarian cancer cells. Oncotarget. 2017 Jul 25;8(55):93502-93515.
6 Microbial Metabolite Signaling Is Required for Systemic Iron Homeostasis. Cell Metab. 2020 Jan 7;31(1):115-130.e6.
7 The Encyclopedia of DNA elements (ENCODE): data portal update. Nucleic Acids Res. 2018 Jan 4;46(D1):D794-D801
8 HSF1 functions as a key defender against palmitic acid-induced ferroptosis in cardiomyocytes. J Mol Cell Cardiol. 2021 Jan;150:65-76.
9 p53, a novel regulator of lipid metabolism pathways. J Hepatol. 2012 Mar;56(3):656-62.

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