Detail Information of DT Wildtype Structure
| General Information of Drug Transporter (DT) | ||||||
|---|---|---|---|---|---|---|
| DT ID | DTD0003 Transporter Info | |||||
| Gene Name | ABCB1 | |||||
| Transporter Name | P-glycoprotein 1 | |||||
| Gene ID | ||||||
| UniProt ID | ||||||
| Modelled Structures of This DT | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Detail Information of Structural Model | ||||||
| Method | Loop building | |||||
| Template PDB | 7A69_A | Identity | 99.74% | |||
| Performance | Minimized Score | -3251.1 kcal/mol | ||||
| Ramachandra Favored |
Excellent |
|||||
| QMEANBrane Quality |
High |
|||||
| Ramachandran Plot |
|
|||||
| Click to Save Ramachandran Plot in PNG Format | ||||||
| Ramz Z Score | -0.37 ± 0.21 | |||||
| Residues in Favored Region | 1219 | Ramachandran favored | 98.07% | |||
| Number of Outliers | 4 | Ramachandran outliers | 0.32% | |||
| Local Quality |
|
|||||
| Click to Save Local Quality Plot in PNG Format | ||||||
| QMEANBrane Score | 0.81 | |||||
| AlphaFold Protein Structure Database | ||||||
| SWISS-MODEL Database | ||||||
| Experimental Structures of This DT | ||||||
| PDB ID | Scanning Method | Resolution | Expression System | Details | Ref | |
| 6C0V | EM | 3.4 Å | Homo sapiens | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A | |||||
| Sequence Length | 1-1280 | Mutation | Yes | |||
| 6FN1 | EM | 3.58 Å | Homo sapiens; Mus musculus | [2] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A | |||||
| Sequence Length | 32-1279 | Mutation | No | |||
| 6FN4 | EM | 4.14 Å | Homo sapiens; Mus musculus | [2] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A | |||||
| Sequence Length | 1-1279 | Mutation | No | |||
| 6QEX | EM | 3.6 Å | Homo sapiens | [3] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A | |||||
| Sequence Length | 1-1280 | Mutation | Yes | |||
| 7A65 | EM | 3.9 Å | Homo sapiens | [4] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A | |||||
| Sequence Length | 1-1280 | Mutation | Yes | |||
| 7A69 | EM | 3.2 Å | Homo sapiens | [4] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A | |||||
| Sequence Length | 1-1280 | Mutation | Yes | |||
| 7A6C | EM | 3.6 Å | Homo sapiens | [4] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A | |||||
| Sequence Length | 1-1280 | Mutation | Yes | |||
| 7A6E | EM | 3.6 Å | Homo sapiens | [4] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A | |||||
| Sequence Length | 1-1280 | Mutation | Yes | |||
| References | ||||||
| 1 | Molecular structure of human P-glycoprotein in the ATP-bound, outward-facing conformation. Science. 2018 Feb 23;359(6378):915-919. | |||||
| 2 | Structure of a zosuquidar and UIC2-bound human-mouse chimeric ABCB1. Proc Natl Acad Sci U S A. 2018 Feb 27;115(9):E1973-E1982. | |||||
| 3 | Structural insight into substrate and inhibitor discrimination by human P-glycoprotein. Science. 2019 Feb 15;363(6428):753-756. | |||||
| 4 | Cryo-EM structures reveal distinct mechanisms of inhibition of the human multidrug transporter ABCB1. Proc Natl Acad Sci U S A. 2020 Oct 20;117(42):26245-26253. | |||||
If you find any error in data or bug in web service, please kindly report it to Dr. Yin and Dr. Li.