Detail Information of DT Wildtype Structure
| General Information of Drug Transporter (DT) | ||||||
|---|---|---|---|---|---|---|
| DT ID | DTD0004 Transporter Info | |||||
| Gene Name | ABCG2 | |||||
| Transporter Name | Breast cancer resistance protein | |||||
| Gene ID | ||||||
| UniProt ID | ||||||
| Modelled Structures of This DT | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Detail Information of Structural Model | ||||||
| Method | Loop building | |||||
| Template PDB | 6VXI_A | Identity | 91.29% | |||
| Performance | Minimized Score | -1498.175 kcal/mol | ||||
| Ramachandra Favored |
Medium |
|||||
| QMEANBrane Quality |
Medium |
|||||
| Ramachandran Plot |
|
|||||
| Click to Save Ramachandran Plot in PNG Format | ||||||
| Ramz Z Score | -1.62 ± 0.31 | |||||
| Residues in Favored Region | 600 | Ramachandran favored | 97.09% | |||
| Number of Outliers | 1 | Ramachandran outliers | 0.16% | |||
| Local Quality |
|
|||||
| Click to Save Local Quality Plot in PNG Format | ||||||
| QMEANBrane Score | 0.79 | |||||
| AlphaFold Protein Structure Database | ||||||
| SWISS-MODEL Database | ||||||
| Experimental Structures of This DT | ||||||
| PDB ID | Scanning Method | Resolution | Expression System | Details | Ref | |
| 6VXF | EM | 3.5 Å | Homo sapiens | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 1-655 | Mutation | No | |||
| 6VXH | EM | 4 Å | Homo sapiens | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 1-655 | Mutation | No | |||
| 6VXI | EM | 3.7 Å | Homo sapiens | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 1-655 | Mutation | No | |||
| 6VXJ | EM | 4.1 Å | Homo sapiens | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 1-655 | Mutation | No | |||
| 5NJ3 | EM | 3.78 Å | Homo sapiens; Mus musculus | [2] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 2-655 | Mutation | No | |||
| 5NJG | EM | 3.78 Å | Homo sapiens; Mus musculus | [2] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 2-655 | Mutation | No | |||
| 6ETI | EM | 3.1 Å | Homo sapiens; Mus musculus | [3] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 1-655 | Mutation | No | |||
| 6FEQ | EM | 3.6 Å | Homo sapiens; Mus musculus | [3] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 1-655 | Mutation | No | |||
| References | ||||||
| 1 | ABCG2 transports anticancer drugs via a closed-to-open switch. Nat Commun. 2020 May 8;11(1):2264. | |||||
| 2 | Structure of the human multidrug transporter ABCG2. Nature. 2017 Jun 22;546(7659):504-509. | |||||
| 3 | Structural basis of small-molecule inhibition of human multidrug transporter ABCG2. Nat Struct Mol Biol. 2018 Apr;25(4):333-340. | |||||
If you find any error in data or bug in web service, please kindly report it to Dr. Yin and Dr. Li.