Detail Information of DT Wildtype Structure
General Information of Drug Transporter (DT) | ||||||
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DT ID | DTD0081 Transporter Info | |||||
Gene Name | SLC11A2 | |||||
Transporter Name | Natural resistance-associated macrophage protein 2 | |||||
Gene ID | ||||||
UniProt ID | ||||||
Modelled Structures of This DT | ||||||
Click to Save PDB File in TXT Format | ||||||
Detail Information of Structural Model | ||||||
Method | Homology modeling | |||||
Template PDB | 5M94_A | Identity | 36.927% | |||
Performance | Minimized Score | -1063.606 kcal/mol | ||||
Ramachandra Favored |
Medium |
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QMEANBrane Quality |
High |
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Ramachandran Plot | ||||||
Click to Save Ramachandran Plot in PNG Format | ||||||
Ramz Z Score | -1.83 ± 0.37 | |||||
Residues in Favored Region | 406 | Ramachandran favored | 95.08% | |||
Number of Outliers | 4 | Ramachandran outliers | 0.94% | |||
Local Quality | ||||||
Click to Save Local Quality Plot in PNG Format | ||||||
QMEANBrane Score | 0.82 | |||||
AlphaFold Protein Structure Database | ||||||
SWISS-MODEL Database | ||||||
Experimental Structures of This DT | ||||||
PDB ID | Scanning Method | Resolution | Expression System | Details | Ref | |
5F0L | X-ray | 3.2 Å | Escherichia coli BL21(DE3) | [1] | ||
Structure | ||||||
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Corresponding chain | D | |||||
Sequence Length | 545-568 | Mutation | No | |||
5F0M | X-ray | 3.1 Å | Escherichia coli BL21(DE3); scherichia coli | [1] | ||
Structure | ||||||
Click to Save PDB File in TXT Format | ||||||
Corresponding chain | D | |||||
Sequence Length | 549-560 | Mutation | No | |||
5F0P | X-ray | 2.78 Å | Escherichia coli BL21(DE3); scherichia coli | [1] | ||
Structure | ||||||
Click to Save PDB File in TXT Format | ||||||
Corresponding chain | D | |||||
Sequence Length | 549-560 | Mutation | Yes | |||
References | ||||||
1 | Structural Mechanism for Cargo Recognition by the Retromer Complex. Cell. 2016 Dec 1;167(6):1623-1635.e14. | |||||
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