Detail Information of DT Wildtype Structure
| General Information of Drug Transporter (DT) | ||||||
|---|---|---|---|---|---|---|
| DT ID | DTD0336 Transporter Info | |||||
| Gene Name | SLC38A9 | |||||
| Transporter Name | Sodium-coupled neutral amino acid transporter 9 | |||||
| Gene ID | ||||||
| UniProt ID | ||||||
| Modelled Structures of This DT | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Detail Information of Structural Model | ||||||
| Method | Homology modeling | |||||
| Template PDB | 6C08_C | Identity | 66.32% | |||
| Performance | Minimized Score | -385.896 kcal/mol | ||||
| Ramachandra Favored |
Poor |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
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| Click to Save Ramachandran Plot in PNG Format | ||||||
| Ramz Z Score | -2.3 ± 0.38 | |||||
| Residues in Favored Region | 429 | Ramachandran favored | 89.75% | |||
| Number of Outliers | 9 | Ramachandran outliers | 1.88% | |||
| Local Quality |
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| Click to Save Local Quality Plot in PNG Format | ||||||
| QMEANBrane Score | 0.65 | |||||
| AlphaFold Protein Structure Database | ||||||
| SWISS-MODEL Database | ||||||
| Experimental Structures of This DT | ||||||
| PDB ID | Scanning Method | Resolution | Expression System | Details | Ref | |
| 6WJ2 | EM | 3.2 Å | Spodoptera frugiperdaHomo sapiens | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | H | |||||
| Sequence Length | 1-119 | Mutation | Yes | |||
| 6WJ3 | EM | 3.9 Å | Spodoptera frugiperdaHomo sapiens | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | H | |||||
| Sequence Length | 1-119 | Mutation | Yes | |||
| References | ||||||
| 1 | Structural mechanism for amino acid-dependent Rag GTPase nucleotide state switching by SLC38A9. Nat Struct Mol Biol. 2020 Nov;27(11):1017-1023. | |||||
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