General Information of Drug Transporter (DT)
DT ID DTD0034 Transporter Info
Gene Name SLC18A2
Transporter Name Vesicular amine transporter 2
Gene ID
6571
UniProt ID
Q05940
Epigenetic Regulations of This DT (EGR)

Methylation

  Prostate cancer

         11 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of SLC18A2 in prostate cancer [ 1 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method HumanMethylation450 BeadChip

Related Molecular Changes

Down regulation of SLC18A2 Experiment Method Microarrays

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

Additional Notes

SLC18A2 promoter Hypermethylation is highly cancerspecific, and that SLC18A2 mRNA and protein levels are significantly decreased in prostate cancer.

  Epigenetic Phenomenon 2

Hypermethylation of SLC18A2 in prostate cancer [ 1 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method HumanMethylation450 BeadChip

Related Molecular Changes

Down regulation of SLC18A2 Experiment Method Western Blot

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

Additional Notes

SLC18A2 promoter Hypermethylation is highly cancerspecific, and that SLC18A2 mRNA and protein levels are significantly decreased in prostate cancer.

  Epigenetic Phenomenon 3

Methylation of SLC18A2 in prostate cancer [ 12 ]

Location

5'UTR (cg01790523)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.91E+00 Statistic Test p-value: 2.79E-02; Z-score: -2.20E+00

Methylation in Case

3.48E-01 (Median) Methylation in Control 6.65E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC18A2 in prostate cancer [ 12 ]

Location

5'UTR (cg05919690)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 3.16E-02; Z-score: -1.56E+00

Methylation in Case

8.00E-01 (Median) Methylation in Control 8.25E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC18A2 in prostate cancer [ 12 ]

Location

TSS1500 (cg26062856)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.13E+00 Statistic Test p-value: 4.93E-02; Z-score: 5.88E+00

Methylation in Case

8.25E-01 (Median) Methylation in Control 7.29E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC18A2 in prostate cancer [ 12 ]

Location

TSS200 (cg22928082)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.05E+00 Statistic Test p-value: 4.52E-04; Z-score: 7.67E+00

Methylation in Case

7.33E-01 (Median) Methylation in Control 3.58E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC18A2 in prostate cancer [ 12 ]

Location

TSS200 (cg18158438)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.83E+00 Statistic Test p-value: 3.25E-02; Z-score: 2.53E+00

Methylation in Case

5.97E-01 (Median) Methylation in Control 3.26E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC18A2 in prostate cancer [ 12 ]

Location

Body (cg19807207)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.05E+00 Statistic Test p-value: 2.81E-02; Z-score: 1.76E+00

Methylation in Case

9.01E-01 (Median) Methylation in Control 8.58E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC18A2 in prostate cancer [ 12 ]

Location

Body (cg15829073)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 4.36E-02; Z-score: 1.60E+00

Methylation in Case

9.04E-01 (Median) Methylation in Control 8.49E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC18A2 in prostate cancer [ 12 ]

Location

3'UTR (cg13605398)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 4.95E+00 Statistic Test p-value: 3.96E-02; Z-score: 1.29E+01

Methylation in Case

4.97E-01 (Median) Methylation in Control 1.00E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Hypermethylation of SLC18A2 in prostate cancer [ 17 ]

Location

Promoter (cg00498305)

Epigenetic Type

Methylation Experiment Method HumanMethylation450 BeadChip

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

Additional Notes

A novel four-gene (AOX1xGSTP1xHAPLN3xSLC18A2) epigenetic field effect signature with over 30% sensitivity for PC at 100% fixed specificity.

  Atypical teratoid rhabdoid tumor

           6 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in atypical teratoid rhabdoid tumor [ 2 ]

Location

5'UTR (cg00512279)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.08E+00 Statistic Test p-value: 5.20E-09; Z-score: -1.42E+00

Methylation in Case

8.44E-01 (Median) Methylation in Control 9.07E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC18A2 in atypical teratoid rhabdoid tumor [ 2 ]

Location

5'UTR (cg08521987)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.68E+00 Statistic Test p-value: 1.38E-07; Z-score: -1.64E+00

Methylation in Case

1.49E-01 (Median) Methylation in Control 4.00E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC18A2 in atypical teratoid rhabdoid tumor [ 2 ]

Location

5'UTR (cg19721867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.33E+00 Statistic Test p-value: 3.35E-06; Z-score: 1.54E+00

Methylation in Case

7.28E-01 (Median) Methylation in Control 5.47E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC18A2 in atypical teratoid rhabdoid tumor [ 2 ]

Location

Body (cg01043119)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.11E+00 Statistic Test p-value: 4.53E-05; Z-score: 1.28E+00

Methylation in Case

9.09E-01 (Median) Methylation in Control 8.17E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC18A2 in atypical teratoid rhabdoid tumor [ 2 ]

Location

Body (cg10245915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 1.43E-02; Z-score: 3.55E-01

Methylation in Case

8.82E-01 (Median) Methylation in Control 8.59E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC18A2 in atypical teratoid rhabdoid tumor [ 2 ]

Location

3'UTR (cg14995160)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.26E+00 Statistic Test p-value: 5.64E-11; Z-score: -2.04E+00

Methylation in Case

6.97E-01 (Median) Methylation in Control 8.76E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Bladder cancer

         11 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in bladder cancer [ 3 ]

Location

5'UTR (cg00512279)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.35E+00 Statistic Test p-value: 1.91E-03; Z-score: 5.16E+00

Methylation in Case

1.75E-01 (Median) Methylation in Control 1.30E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC18A2 in bladder cancer [ 3 ]

Location

5'UTR (cg08521987)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.74E+00 Statistic Test p-value: 2.91E-03; Z-score: 3.00E+00

Methylation in Case

1.05E-01 (Median) Methylation in Control 6.02E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC18A2 in bladder cancer [ 3 ]

Location

5'UTR (cg19721867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.42E+00 Statistic Test p-value: 7.40E-03; Z-score: 3.03E+00

Methylation in Case

1.53E-02 (Median) Methylation in Control 1.07E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC18A2 in bladder cancer [ 3 ]

Location

TSS1500 (cg15806304)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.16E+00 Statistic Test p-value: 1.98E-02; Z-score: 2.75E+00

Methylation in Case

4.87E-01 (Median) Methylation in Control 4.19E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC18A2 in bladder cancer [ 3 ]

Location

TSS200 (cg15173134)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.61E+00 Statistic Test p-value: 3.51E-03; Z-score: 1.82E+00

Methylation in Case

1.20E-01 (Median) Methylation in Control 7.49E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC18A2 in bladder cancer [ 3 ]

Location

Body (cg15520443)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -4.26E+00 Statistic Test p-value: 2.78E-08; Z-score: -7.77E+00

Methylation in Case

9.29E-02 (Median) Methylation in Control 3.95E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC18A2 in bladder cancer [ 3 ]

Location

Body (cg10245915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.24E+00 Statistic Test p-value: 4.41E-04; Z-score: -4.92E+00

Methylation in Case

8.75E-02 (Median) Methylation in Control 1.08E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC18A2 in bladder cancer [ 3 ]

Location

Body (cg01043119)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.30E+00 Statistic Test p-value: 5.98E-04; Z-score: -2.56E+00

Methylation in Case

6.31E-02 (Median) Methylation in Control 8.21E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC18A2 in bladder cancer [ 3 ]

Location

Body (cg20102878)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 1.45E-02; Z-score: -7.98E-01

Methylation in Case

8.17E-01 (Median) Methylation in Control 8.30E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC18A2 in bladder cancer [ 3 ]

Location

Body (cg26583753)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 2.20E-02; Z-score: -5.57E-01

Methylation in Case

8.51E-01 (Median) Methylation in Control 8.62E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of SLC18A2 in bladder cancer [ 3 ]

Location

Body (cg19617377)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.20E+00 Statistic Test p-value: 3.23E-02; Z-score: -1.38E+00

Methylation in Case

7.73E-02 (Median) Methylation in Control 9.27E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Breast cancer

         13 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

5'UTR (cg00512279)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.44E+00 Statistic Test p-value: 5.34E-10; Z-score: 2.14E+00

Methylation in Case

1.65E-01 (Median) Methylation in Control 1.14E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

5'UTR (cg08521987)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.99E+00 Statistic Test p-value: 2.10E-09; Z-score: 2.10E+00

Methylation in Case

1.32E-01 (Median) Methylation in Control 6.62E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

5'UTR (cg19721867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.41E+00 Statistic Test p-value: 1.92E-04; Z-score: 3.45E-01

Methylation in Case

1.88E-02 (Median) Methylation in Control 1.34E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

TSS1500 (cg15806304)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+00 Statistic Test p-value: 1.71E-09; Z-score: 1.82E+00

Methylation in Case

6.19E-01 (Median) Methylation in Control 5.25E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

TSS1500 (cg00498305)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.34E+00 Statistic Test p-value: 8.88E-09; Z-score: 2.10E+00

Methylation in Case

3.77E-01 (Median) Methylation in Control 2.83E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

TSS1500 (cg13980799)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.30E+00 Statistic Test p-value: 2.25E-08; Z-score: 2.42E+00

Methylation in Case

5.29E-01 (Median) Methylation in Control 4.08E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

TSS200 (cg15173134)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.52E+00 Statistic Test p-value: 5.87E-10; Z-score: 2.35E+00

Methylation in Case

2.80E-01 (Median) Methylation in Control 1.11E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

Body (cg15225091)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.40E+00 Statistic Test p-value: 4.75E-08; Z-score: -1.64E+00

Methylation in Case

3.01E-01 (Median) Methylation in Control 4.21E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

Body (cg15520443)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.25E+00 Statistic Test p-value: 2.11E-06; Z-score: -2.00E+00

Methylation in Case

1.32E-01 (Median) Methylation in Control 2.98E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

Body (cg20102878)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 9.03E-05; Z-score: -4.75E-01

Methylation in Case

8.19E-01 (Median) Methylation in Control 8.33E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

Body (cg01043119)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.38E+00 Statistic Test p-value: 6.22E-04; Z-score: -8.55E-01

Methylation in Case

7.77E-02 (Median) Methylation in Control 1.07E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

Body (cg16099210)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.13E+00 Statistic Test p-value: 2.73E-02; Z-score: 2.37E-01

Methylation in Case

4.05E-02 (Median) Methylation in Control 3.58E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of SLC18A2 in breast cancer [ 4 ]

Location

3'UTR (cg14995160)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 2.72E-03; Z-score: -5.93E-01

Methylation in Case

7.75E-01 (Median) Methylation in Control 7.99E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Renal cell carcinoma

         10 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in clear cell renal cell carcinoma [ 5 ]

Location

5'UTR (cg08521987)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.32E+00 Statistic Test p-value: 3.93E-04; Z-score: 8.39E-01

Methylation in Case

3.33E-02 (Median) Methylation in Control 2.53E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC18A2 in clear cell renal cell carcinoma [ 5 ]

Location

5'UTR (cg00512279)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.17E+00 Statistic Test p-value: 5.22E-04; Z-score: 5.51E-01

Methylation in Case

1.23E-01 (Median) Methylation in Control 1.05E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC18A2 in clear cell renal cell carcinoma [ 5 ]

Location

5'UTR (cg19721867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 1.08E-02; Z-score: 5.31E-01

Methylation in Case

1.78E-02 (Median) Methylation in Control 1.64E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC18A2 in clear cell renal cell carcinoma [ 5 ]

Location

TSS1500 (cg15806304)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.17E+00 Statistic Test p-value: 7.46E-06; Z-score: 2.35E+00

Methylation in Case

6.54E-01 (Median) Methylation in Control 5.57E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC18A2 in clear cell renal cell carcinoma [ 5 ]

Location

TSS1500 (cg13980799)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.45E+00 Statistic Test p-value: 1.12E-03; Z-score: 2.21E+00

Methylation in Case

5.58E-01 (Median) Methylation in Control 3.85E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC18A2 in clear cell renal cell carcinoma [ 5 ]

Location

TSS1500 (cg00498305)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.23E+00 Statistic Test p-value: 2.83E-03; Z-score: 1.10E+00

Methylation in Case

2.99E-01 (Median) Methylation in Control 2.43E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC18A2 in clear cell renal cell carcinoma [ 5 ]

Location

TSS200 (cg15173134)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.15E+00 Statistic Test p-value: 2.30E-02; Z-score: 1.95E-01

Methylation in Case

5.20E-02 (Median) Methylation in Control 4.53E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC18A2 in clear cell renal cell carcinoma [ 5 ]

Location

Body (cg10245915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.22E+00 Statistic Test p-value: 1.12E-02; Z-score: -7.55E-01

Methylation in Case

8.80E-02 (Median) Methylation in Control 1.08E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC18A2 in clear cell renal cell carcinoma [ 5 ]

Location

Body (cg19617377)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 1.42E-02; Z-score: -1.10E-02

Methylation in Case

3.64E-02 (Median) Methylation in Control 3.65E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC18A2 in clear cell renal cell carcinoma [ 5 ]

Location

Body (cg16099210)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 3.99E-02; Z-score: -1.08E-01

Methylation in Case

2.75E-02 (Median) Methylation in Control 2.85E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Colorectal cancer

         14 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

5'UTR (cg08521987)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 3.43E+00 Statistic Test p-value: 4.59E-15; Z-score: 9.06E+00

Methylation in Case

6.31E-01 (Median) Methylation in Control 1.84E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

5'UTR (cg19721867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.41E+01 Statistic Test p-value: 2.72E-13; Z-score: 2.84E+01

Methylation in Case

2.98E-01 (Median) Methylation in Control 2.12E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

5'UTR (cg00512279)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.15E+00 Statistic Test p-value: 6.62E-13; Z-score: 5.65E+00

Methylation in Case

5.79E-01 (Median) Methylation in Control 2.70E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

TSS1500 (cg13980799)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.23E+00 Statistic Test p-value: 8.59E-07; Z-score: 1.88E+00

Methylation in Case

7.15E-01 (Median) Methylation in Control 5.83E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

TSS1500 (cg00498305)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.28E+00 Statistic Test p-value: 8.62E-07; Z-score: 1.74E+00

Methylation in Case

4.96E-01 (Median) Methylation in Control 3.88E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

TSS200 (cg15173134)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 6.90E+00 Statistic Test p-value: 1.02E-15; Z-score: 9.97E+00

Methylation in Case

5.63E-01 (Median) Methylation in Control 8.17E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

Body (cg01043119)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.70E+00 Statistic Test p-value: 7.94E-13; Z-score: 7.87E+00

Methylation in Case

5.00E-01 (Median) Methylation in Control 1.85E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

Body (cg16099210)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 6.42E+00 Statistic Test p-value: 4.07E-12; Z-score: 1.60E+01

Methylation in Case

2.64E-01 (Median) Methylation in Control 4.11E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

Body (cg15520443)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.29E+00 Statistic Test p-value: 9.49E-12; Z-score: -2.75E+00

Methylation in Case

2.26E-01 (Median) Methylation in Control 5.17E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

Body (cg19617377)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.26E+00 Statistic Test p-value: 2.48E-11; Z-score: 8.40E+00

Methylation in Case

2.89E-01 (Median) Methylation in Control 1.28E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

Body (cg10245915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.99E+00 Statistic Test p-value: 5.50E-11; Z-score: 5.51E+00

Methylation in Case

3.93E-01 (Median) Methylation in Control 1.97E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

Body (cg15225091)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.31E+00 Statistic Test p-value: 3.62E-06; Z-score: 2.52E+00

Methylation in Case

6.74E-01 (Median) Methylation in Control 5.13E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

Body (cg20102878)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 1.90E-03; Z-score: -9.63E-01

Methylation in Case

9.29E-01 (Median) Methylation in Control 9.39E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 14

Methylation of SLC18A2 in colorectal cancer [ 6 ]

Location

3'UTR (cg14995160)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 2.61E-03; Z-score: -8.11E-01

Methylation in Case

8.55E-01 (Median) Methylation in Control 8.79E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Hepatocellular carcinoma

         18 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

5'UTR (cg00512279)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.60E+00 Statistic Test p-value: 1.05E-07; Z-score: 2.92E+00

Methylation in Case

2.73E-01 (Median) Methylation in Control 1.70E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

5'UTR (cg08521987)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.48E+00 Statistic Test p-value: 1.59E-06; Z-score: 2.04E+00

Methylation in Case

1.54E-01 (Median) Methylation in Control 1.04E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

TSS1500 (cg11826452)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.18E+00 Statistic Test p-value: 2.64E-13; Z-score: -2.16E+00

Methylation in Case

6.03E-01 (Median) Methylation in Control 7.13E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

TSS1500 (cg19024632)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.46E+00 Statistic Test p-value: 1.43E-10; Z-score: 2.03E+00

Methylation in Case

3.97E-01 (Median) Methylation in Control 2.71E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

TSS200 (cg15173134)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.11E+00 Statistic Test p-value: 1.09E-03; Z-score: 1.74E-01

Methylation in Case

7.69E-02 (Median) Methylation in Control 6.93E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

Body (cg08701543)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.62E+00 Statistic Test p-value: 9.74E-20; Z-score: -4.09E+00

Methylation in Case

3.96E-01 (Median) Methylation in Control 6.41E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

Body (cg19000612)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.49E+00 Statistic Test p-value: 9.29E-18; Z-score: -5.51E+00

Methylation in Case

5.71E-01 (Median) Methylation in Control 8.52E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

Body (cg17493839)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.54E+00 Statistic Test p-value: 4.62E-17; Z-score: -2.18E+01

Methylation in Case

6.28E-01 (Median) Methylation in Control 9.66E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

Body (cg20122943)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 4.61E+00 Statistic Test p-value: 5.61E-16; Z-score: 1.19E+01

Methylation in Case

3.54E-01 (Median) Methylation in Control 7.67E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

Body (cg23880589)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.59E+00 Statistic Test p-value: 2.33E-13; Z-score: 3.53E+00

Methylation in Case

4.80E-01 (Median) Methylation in Control 3.02E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

Body (cg15520443)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.01E+00 Statistic Test p-value: 2.89E-09; Z-score: -1.98E+00

Methylation in Case

1.18E-01 (Median) Methylation in Control 2.38E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

Body (cg16099210)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.03E+00 Statistic Test p-value: 5.62E-08; Z-score: 3.21E+00

Methylation in Case

1.33E-01 (Median) Methylation in Control 6.52E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

Body (cg10245915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.41E+00 Statistic Test p-value: 1.28E-06; Z-score: 2.54E+00

Methylation in Case

1.89E-01 (Median) Methylation in Control 1.34E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 14

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

Body (cg15225091)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.28E+00 Statistic Test p-value: 4.41E-05; Z-score: 1.65E+00

Methylation in Case

3.28E-01 (Median) Methylation in Control 2.55E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 15

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

Body (cg01043119)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+00 Statistic Test p-value: 2.29E-04; Z-score: 9.10E-01

Methylation in Case

1.18E-01 (Median) Methylation in Control 1.01E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 16

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

Body (cg19617377)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 5.37E-03; Z-score: 4.12E-01

Methylation in Case

8.86E-02 (Median) Methylation in Control 8.30E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 17

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

3'UTR (cg10838500)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.65E+00 Statistic Test p-value: 2.32E-19; Z-score: -4.12E+00

Methylation in Case

3.27E-01 (Median) Methylation in Control 5.39E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 18

Methylation of SLC18A2 in hepatocellular carcinoma [ 7 ]

Location

3'UTR (cg14995160)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 3.08E-03; Z-score: -4.92E-01

Methylation in Case

7.59E-01 (Median) Methylation in Control 7.83E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  HIV infection

         13 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

5'UTR (cg00512279)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.46E+00 Statistic Test p-value: 7.70E-05; Z-score: 1.62E+00

Methylation in Case

1.32E-01 (Median) Methylation in Control 9.07E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

5'UTR (cg08521987)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.67E+00 Statistic Test p-value: 9.85E-05; Z-score: 1.21E+00

Methylation in Case

1.12E-01 (Median) Methylation in Control 6.73E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

5'UTR (cg19721867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.90E+00 Statistic Test p-value: 4.13E-03; Z-score: 1.70E+00

Methylation in Case

1.99E-02 (Median) Methylation in Control 1.04E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

TSS1500 (cg15806304)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.09E+00 Statistic Test p-value: 1.54E-06; Z-score: 1.80E+00

Methylation in Case

7.77E-01 (Median) Methylation in Control 7.11E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

TSS1500 (cg00498305)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.13E+00 Statistic Test p-value: 1.48E-02; Z-score: 1.22E+00

Methylation in Case

5.08E-01 (Median) Methylation in Control 4.50E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

TSS200 (cg15173134)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.67E+00 Statistic Test p-value: 1.64E-03; Z-score: 2.07E+00

Methylation in Case

1.32E-01 (Median) Methylation in Control 7.90E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

Body (cg10245915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.29E+00 Statistic Test p-value: 2.00E-04; Z-score: 1.21E+00

Methylation in Case

9.86E-02 (Median) Methylation in Control 7.64E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

Body (cg15225091)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.37E+00 Statistic Test p-value: 6.82E-04; Z-score: 1.35E+00

Methylation in Case

2.41E-01 (Median) Methylation in Control 1.75E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

Body (cg19617377)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.16E+00 Statistic Test p-value: 7.16E-04; Z-score: 8.22E-01

Methylation in Case

8.41E-02 (Median) Methylation in Control 7.26E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

Body (cg16099210)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.65E+00 Statistic Test p-value: 1.04E-03; Z-score: 1.01E+00

Methylation in Case

4.38E-02 (Median) Methylation in Control 2.66E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

Body (cg01043119)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.13E+00 Statistic Test p-value: 4.69E-03; Z-score: 4.13E-01

Methylation in Case

7.90E-02 (Median) Methylation in Control 6.99E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

Body (cg15520443)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.58E+00 Statistic Test p-value: 1.25E-02; Z-score: 1.01E+00

Methylation in Case

6.92E-02 (Median) Methylation in Control 4.37E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of SLC18A2 in HIV infection [ 8 ]

Location

3'UTR (cg14995160)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 1.40E-02; Z-score: 4.17E-01

Methylation in Case

7.41E-01 (Median) Methylation in Control 7.17E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Lung adenocarcinoma

         10 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in lung adenocarcinoma [ 9 ]

Location

5'UTR (cg08521987)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.46E+00 Statistic Test p-value: 6.15E-03; Z-score: 7.97E+00

Methylation in Case

3.34E-01 (Median) Methylation in Control 1.36E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC18A2 in lung adenocarcinoma [ 9 ]

Location

5'UTR (cg00512279)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.79E+00 Statistic Test p-value: 7.85E-03; Z-score: 4.34E+00

Methylation in Case

2.88E-01 (Median) Methylation in Control 1.61E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC18A2 in lung adenocarcinoma [ 9 ]

Location

5'UTR (cg19721867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.54E+00 Statistic Test p-value: 1.84E-02; Z-score: 9.58E+00

Methylation in Case

1.00E-01 (Median) Methylation in Control 3.93E-02 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC18A2 in lung adenocarcinoma [ 9 ]

Location

TSS1500 (cg15806304)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.25E+00 Statistic Test p-value: 1.31E-04; Z-score: 3.92E+00

Methylation in Case

6.41E-01 (Median) Methylation in Control 5.13E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC18A2 in lung adenocarcinoma [ 9 ]

Location

TSS1500 (cg00498305)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.40E+00 Statistic Test p-value: 8.41E-04; Z-score: 4.29E+00

Methylation in Case

4.43E-01 (Median) Methylation in Control 3.17E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC18A2 in lung adenocarcinoma [ 9 ]

Location

TSS1500 (cg13980799)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.40E+00 Statistic Test p-value: 2.79E-03; Z-score: 2.88E+00

Methylation in Case

6.15E-01 (Median) Methylation in Control 4.38E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC18A2 in lung adenocarcinoma [ 9 ]

Location

TSS200 (cg15173134)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.60E+00 Statistic Test p-value: 2.60E-03; Z-score: 8.38E+00

Methylation in Case

4.13E-01 (Median) Methylation in Control 1.59E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC18A2 in lung adenocarcinoma [ 9 ]

Location

Body (cg15225091)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.37E+00 Statistic Test p-value: 4.74E-03; Z-score: 2.58E+00

Methylation in Case

3.69E-01 (Median) Methylation in Control 2.68E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC18A2 in lung adenocarcinoma [ 9 ]

Location

Body (cg16099210)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.41E+00 Statistic Test p-value: 1.78E-02; Z-score: 4.66E+00

Methylation in Case

1.37E-01 (Median) Methylation in Control 5.71E-02 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC18A2 in lung adenocarcinoma [ 9 ]

Location

Body (cg10245915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.28E+00 Statistic Test p-value: 3.83E-02; Z-score: 2.40E+00

Methylation in Case

1.64E-01 (Median) Methylation in Control 1.28E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Pancretic ductal adenocarcinoma

           8 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in pancretic ductal adenocarcinoma [ 10 ]

Location

5'UTR (cg18003231)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.10E+00 Statistic Test p-value: 6.19E-07; Z-score: -1.52E+00

Methylation in Case

8.05E-01 (Median) Methylation in Control 8.85E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC18A2 in pancretic ductal adenocarcinoma [ 10 ]

Location

TSS1500 (cg02915746)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.26E+00 Statistic Test p-value: 2.70E-12; Z-score: 1.29E+00

Methylation in Case

7.61E-02 (Median) Methylation in Control 6.06E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC18A2 in pancretic ductal adenocarcinoma [ 10 ]

Location

TSS1500 (cg05907949)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 3.05E-02; Z-score: -3.74E-02

Methylation in Case

1.17E-01 (Median) Methylation in Control 1.17E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC18A2 in pancretic ductal adenocarcinoma [ 10 ]

Location

TSS200 (cg00292986)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.12E+00 Statistic Test p-value: 1.07E-02; Z-score: -2.25E-01

Methylation in Case

8.42E-02 (Median) Methylation in Control 9.43E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC18A2 in pancretic ductal adenocarcinoma [ 10 ]

Location

1stExon (cg11915641)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.35E+00 Statistic Test p-value: 2.49E-05; Z-score: -8.69E-01

Methylation in Case

1.15E-01 (Median) Methylation in Control 1.54E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC18A2 in pancretic ductal adenocarcinoma [ 10 ]

Location

1stExon (cg06662991)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.19E+00 Statistic Test p-value: 3.31E-04; Z-score: -8.48E-01

Methylation in Case

9.98E-02 (Median) Methylation in Control 1.19E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC18A2 in pancretic ductal adenocarcinoma [ 10 ]

Location

Body (cg24529484)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.43E+00 Statistic Test p-value: 4.45E-02; Z-score: -1.33E+00

Methylation in Case

1.76E-01 (Median) Methylation in Control 2.51E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC18A2 in pancretic ductal adenocarcinoma [ 10 ]

Location

3'UTR (cg00321824)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.09E+00 Statistic Test p-value: 2.83E-06; Z-score: 1.68E+00

Methylation in Case

8.09E-01 (Median) Methylation in Control 7.40E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Papillary thyroid cancer

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in papillary thyroid cancer [ 11 ]

Location

5'UTR (cg19721867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.11E+00 Statistic Test p-value: 1.29E-02; Z-score: 6.35E-01

Methylation in Case

4.87E-02 (Median) Methylation in Control 4.40E-02 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC18A2 in papillary thyroid cancer [ 11 ]

Location

TSS1500 (cg15806304)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.14E+00 Statistic Test p-value: 2.75E-03; Z-score: 9.61E-01

Methylation in Case

4.70E-01 (Median) Methylation in Control 4.11E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC18A2 in papillary thyroid cancer [ 11 ]

Location

Body (cg20102878)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 5.81E-04; Z-score: -7.54E-01

Methylation in Case

8.87E-01 (Median) Methylation in Control 8.99E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC18A2 in papillary thyroid cancer [ 11 ]

Location

Body (cg10245915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.05E+00 Statistic Test p-value: 3.23E-02; Z-score: 2.58E-01

Methylation in Case

9.67E-02 (Median) Methylation in Control 9.17E-02 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC18A2 in papillary thyroid cancer [ 11 ]

Location

Body (cg19617377)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.05E+00 Statistic Test p-value: 3.75E-02; Z-score: 2.83E-01

Methylation in Case

6.87E-02 (Median) Methylation in Control 6.57E-02 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Systemic lupus erythematosus

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in systemic lupus erythematosus [ 13 ]

Location

5'UTR (cg19721867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 3.96E-02; Z-score: -4.99E-02

Methylation in Case

1.36E-02 (Median) Methylation in Control 1.43E-02 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC18A2 in systemic lupus erythematosus [ 13 ]

Location

Body (cg19617377)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 4.16E-02; Z-score: -7.02E-02

Methylation in Case

9.25E-02 (Median) Methylation in Control 9.45E-02 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Colon cancer

           9 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in colon adenocarcinoma [ 14 ]

Location

TSS1500 (cg13202751)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.16E+00 Statistic Test p-value: 9.23E-05; Z-score: 1.39E+00

Methylation in Case

5.85E-01 (Median) Methylation in Control 5.05E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC18A2 in colon adenocarcinoma [ 14 ]

Location

TSS1500 (cg09177518)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.44E+00 Statistic Test p-value: 2.06E-04; Z-score: 1.95E+00

Methylation in Case

3.67E-01 (Median) Methylation in Control 2.54E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC18A2 in colon adenocarcinoma [ 14 ]

Location

TSS1500 (cg26153885)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 1.69E-03; Z-score: -1.50E+00

Methylation in Case

7.73E-01 (Median) Methylation in Control 8.16E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC18A2 in colon adenocarcinoma [ 14 ]

Location

TSS1500 (cg08072251)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.38E+00 Statistic Test p-value: 2.12E-03; Z-score: 1.85E+00

Methylation in Case

1.25E-01 (Median) Methylation in Control 9.05E-02 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC18A2 in colon adenocarcinoma [ 14 ]

Location

Body (cg23274660)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.60E+00 Statistic Test p-value: 5.67E-06; Z-score: -1.47E+00

Methylation in Case

1.79E-01 (Median) Methylation in Control 2.86E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC18A2 in colon adenocarcinoma [ 14 ]

Location

Body (cg08362628)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.14E+00 Statistic Test p-value: 1.19E-04; Z-score: -2.85E+00

Methylation in Case

7.15E-01 (Median) Methylation in Control 8.12E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC18A2 in colon adenocarcinoma [ 14 ]

Location

Body (cg06070755)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 1.64E-03; Z-score: -2.19E+00

Methylation in Case

8.45E-01 (Median) Methylation in Control 8.86E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC18A2 in colon adenocarcinoma [ 14 ]

Location

Body (cg10091752)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.19E+00 Statistic Test p-value: 3.41E-03; Z-score: -9.05E-01

Methylation in Case

2.81E-01 (Median) Methylation in Control 3.33E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC18A2 in colon adenocarcinoma [ 14 ]

Location

3'UTR (cg03234405)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.11E+00 Statistic Test p-value: 4.60E-04; Z-score: -3.04E+00

Methylation in Case

7.47E-01 (Median) Methylation in Control 8.29E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Depression

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in depression [ 15 ]

Location

Body (cg10245915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 5.26E-03; Z-score: 6.15E-01

Methylation in Case

6.86E-02 (Median) Methylation in Control 6.33E-02 (Median)

Studied Phenotype

Depression [ ICD-11: 6A8Z]

Experimental Material

Patient tissue samples

  Panic disorder

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC18A2 in panic disorder [ 16 ]

Location

Body (cg15225091)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -9.28E-01 Statistic Test p-value: 2.59E-02; Z-score: -3.94E-01

Methylation in Case

-3.22E+00 (Median) Methylation in Control -2.99E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

microRNA

  Unclear Phenotype

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

miR-431 directly targets SLC18A2 [ 18 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-431 miRNA Mature ID miR-431-5p

miRNA Sequence

UGUCUUGCAGGCCGUCAUGCA

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 2

miR-4639 directly targets SLC18A2 [ 18 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-4639 miRNA Mature ID miR-4639-5p

miRNA Sequence

UUGCUAAGUAGGCUGAGAUUGA

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 3

miR-6507 directly targets SLC18A2 [ 18 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-6507 miRNA Mature ID miR-6507-5p

miRNA Sequence

GAAGAAUAGGAGGGACUUUGU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)
References
1 Large-scale evaluation of SLC18A2 in prostate cancer reveals diagnostic and prognostic biomarker potential at three molecular levels. Mol Oncol. 2016 Jun;10(6):825-37.
2 Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes. Cancer Cell. 2016 Mar 14;29(3):379-393.
3 DNA Methylation Dynamics in Urological Tumors.
4 Genome-wide Scan for Methylation Profiles in Breast Cancer
5 A CpG-methylation-based assay to predict survival in clear cell renal cell carcinoma. Nat Commun. 2015 Oct 30;6:8699.
6 Differences in DNA methylation signatures reveal multiple pathways of progression from adenoma to colorectal cancer. Gastroenterology. 2014 Aug;147(2):418-29.e8.
7 Exploring genome-wide DNA methylation profiles altered in hepatocellular carcinoma using Infinium HumanMethylation 450 BeadChips. Epigenetics. 2013 Jan;8(1):34-43.
8 HIV-1 Infection Accelerates Age According to the Epigenetic Clock. J Infect Dis. 2015 Nov 15;212(10):1563-73.
9 DNA methylation analysis of lung adenocarcinoma and adjacent non-tumor tissues
10 Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling. Int J Cancer. 2014 Sep 1;135(5):1110-8.
11 Prognostic Classifier Based on Genome-Wide DNA Methylation Profiling in Well-Differentiated Thyroid Tumors. J Clin Endocrinol Metab. 2017 Nov 1;102(11):4089-4099.
12 Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array. BMC Genomics. 2014 Jan 22;15:51.
13 Genome-wide DNA methylation analysis of systemic lupus erythematosus reveals persistent hypomethylation of interferon genes and compositional changes to CD4+ T-cell populations. PLoS Genet. 2013;9(8):e1003678.
14 Genome-scale analysis of DNA methylation in colorectal cancer using Infinium HumanMethylation450 BeadChips. Epigenetics. 2013 Sep;8(9):921-34.
15 DNA methylation and inflammation marker profiles associated with a history of depression. Hum Mol Genet. 2018 Aug 15;27(16):2840-2850.
16 DNA Methylation signatures in panic disorder. Transl Psychiatry. 2017 Dec 18;7(12):1287.
17 Heterogeneous patterns of DNA methylation-based field effects in histologically normal prostate tissue from cancer patients. Sci Rep. 2017 Jan 13;7:40636.
18 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response. Genes Dev. 2011 Oct 15;25(20):2173-86.

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