General Information of Drug Transporter (DT)
DT ID DTD0041 Transporter Info
Gene Name ABCA3
Transporter Name ATP-binding cassette sub-family A member 3
Gene ID
21
UniProt ID
Q99758
Epigenetic Regulations of This DT (EGR)

Methylation

  Atypical teratoid rhabdoid tumor

         43 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg02543796)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.15E+00 Statistic Test p-value: 1.26E-08; Z-score: 1.37E+00

Methylation in Case

8.93E-01 (Median) Methylation in Control 7.80E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg04783228)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 3.78E-08; Z-score: -1.83E+00

Methylation in Case

7.12E-01 (Median) Methylation in Control 8.16E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg06250288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.30E+00 Statistic Test p-value: 5.91E-08; Z-score: 1.40E+00

Methylation in Case

9.12E-01 (Median) Methylation in Control 7.00E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg08644341)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.15E+00 Statistic Test p-value: 1.47E-07; Z-score: 1.35E+00

Methylation in Case

8.91E-01 (Median) Methylation in Control 7.74E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.40E+00 Statistic Test p-value: 1.56E-07; Z-score: -1.38E+00

Methylation in Case

3.56E-01 (Median) Methylation in Control 4.98E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg09722408)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 1.90E-07; Z-score: -1.09E+00

Methylation in Case

6.61E-01 (Median) Methylation in Control 7.22E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 1.50E-05; Z-score: 8.52E-01

Methylation in Case

8.19E-01 (Median) Methylation in Control 7.56E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg00644103)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 3.13E-05; Z-score: 8.11E-01

Methylation in Case

8.74E-01 (Median) Methylation in Control 8.14E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg00718541)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.34E+00 Statistic Test p-value: 3.50E-05; Z-score: 1.32E+00

Methylation in Case

8.33E-01 (Median) Methylation in Control 6.23E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.10E+00 Statistic Test p-value: 5.79E-05; Z-score: 5.52E-01

Methylation in Case

9.17E-01 (Median) Methylation in Control 8.32E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg01491428)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 7.00E-05; Z-score: -7.29E-01

Methylation in Case

8.99E-01 (Median) Methylation in Control 9.16E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg01550915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.39E+00 Statistic Test p-value: 7.08E-05; Z-score: -1.23E+00

Methylation in Case

4.30E-01 (Median) Methylation in Control 5.98E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg02124920)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.10E+00 Statistic Test p-value: 1.19E-04; Z-score: 5.93E-01

Methylation in Case

8.67E-01 (Median) Methylation in Control 7.88E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 14

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg02257312)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.20E+00 Statistic Test p-value: 1.38E-04; Z-score: -7.90E-01

Methylation in Case

4.76E-01 (Median) Methylation in Control 5.71E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 15

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.61E+00 Statistic Test p-value: 2.23E-04; Z-score: -1.27E+00

Methylation in Case

2.13E-01 (Median) Methylation in Control 3.42E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 16

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.33E+00 Statistic Test p-value: 5.45E-04; Z-score: -7.47E-01

Methylation in Case

3.09E-01 (Median) Methylation in Control 4.12E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 17

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.08E+00 Statistic Test p-value: 5.72E-04; Z-score: -7.28E-01

Methylation in Case

5.32E-01 (Median) Methylation in Control 5.74E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 18

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg05093254)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.22E+00 Statistic Test p-value: 1.23E-03; Z-score: 8.82E-01

Methylation in Case

5.90E-01 (Median) Methylation in Control 4.85E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 19

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg05147509)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.74E+00 Statistic Test p-value: 1.30E-03; Z-score: -9.63E-01

Methylation in Case

1.37E-01 (Median) Methylation in Control 2.39E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 20

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg05218653)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 1.33E-03; Z-score: -8.69E-01

Methylation in Case

7.05E-01 (Median) Methylation in Control 7.69E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 21

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg05654361)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.25E+00 Statistic Test p-value: 1.59E-03; Z-score: 1.09E+00

Methylation in Case

6.59E-01 (Median) Methylation in Control 5.28E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 22

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg05814755)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.28E+00 Statistic Test p-value: 1.67E-03; Z-score: -8.79E-01

Methylation in Case

4.71E-01 (Median) Methylation in Control 6.02E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 23

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg05824333)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 1.69E-03; Z-score: -4.97E-01

Methylation in Case

8.01E-01 (Median) Methylation in Control 8.27E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 24

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg06780216)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 2.93E-03; Z-score: 5.24E-01

Methylation in Case

8.85E-01 (Median) Methylation in Control 8.62E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 25

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg06933862)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.27E+00 Statistic Test p-value: 3.09E-03; Z-score: -6.91E-01

Methylation in Case

8.30E-02 (Median) Methylation in Control 1.06E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 26

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg07301574)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 3.75E-03; Z-score: 5.79E-01

Methylation in Case

8.65E-01 (Median) Methylation in Control 8.09E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 27

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg07701514)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.20E+00 Statistic Test p-value: 4.81E-03; Z-score: 4.13E-01

Methylation in Case

7.95E-02 (Median) Methylation in Control 6.63E-02 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 28

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.12E+00 Statistic Test p-value: 4.96E-03; Z-score: 6.08E-01

Methylation in Case

7.95E-01 (Median) Methylation in Control 7.12E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 29

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg08131081)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.06E+00 Statistic Test p-value: 5.36E-03; Z-score: 3.09E-01

Methylation in Case

1.03E-01 (Median) Methylation in Control 9.66E-02 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 30

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg08322747)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 5.76E-03; Z-score: -5.07E-01

Methylation in Case

8.17E-01 (Median) Methylation in Control 8.64E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 31

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.12E+00 Statistic Test p-value: 6.57E-03; Z-score: 6.68E-01

Methylation in Case

6.02E-01 (Median) Methylation in Control 5.36E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 32

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg08490220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.02E+00 Statistic Test p-value: 7.05E-03; Z-score: 3.22E-01

Methylation in Case

8.64E-01 (Median) Methylation in Control 8.46E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 33

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg09263316)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 9.73E-03; Z-score: -4.17E-01

Methylation in Case

8.10E-01 (Median) Methylation in Control 8.22E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 34

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg09481056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 1.07E-02; Z-score: -6.16E-01

Methylation in Case

8.12E-01 (Median) Methylation in Control 8.45E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 35

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg09632163)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 1.13E-02; Z-score: 6.28E-01

Methylation in Case

8.69E-01 (Median) Methylation in Control 8.37E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 36

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg09681286)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 1.18E-02; Z-score: 6.92E-01

Methylation in Case

7.87E-01 (Median) Methylation in Control 7.31E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 37

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg09945896)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 1.24E-02; Z-score: -4.92E-01

Methylation in Case

8.80E-01 (Median) Methylation in Control 8.94E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 38

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg09954729)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 1.26E-02; Z-score: 5.07E-01

Methylation in Case

8.84E-01 (Median) Methylation in Control 8.50E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 39

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg10125193)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.11E+00 Statistic Test p-value: 1.36E-02; Z-score: 8.28E-01

Methylation in Case

8.90E-01 (Median) Methylation in Control 8.01E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 40

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg10275969)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 1.43E-02; Z-score: -4.52E-01

Methylation in Case

8.96E-01 (Median) Methylation in Control 9.08E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 41

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

3'UTR (cg06335980)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.21E+00 Statistic Test p-value: 1.15E-13; Z-score: -2.15E+00

Methylation in Case

6.80E-01 (Median) Methylation in Control 8.20E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 42

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

3'UTR (cg07737682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 2.66E-13; Z-score: -2.38E+00

Methylation in Case

7.43E-01 (Median) Methylation in Control 8.56E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 43

Methylation of ABCA3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

3'UTR (cg10154010)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.99E+00 Statistic Test p-value: 2.51E-12; Z-score: 2.13E+00

Methylation in Case

3.97E-01 (Median) Methylation in Control 1.99E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Bladder cancer

         32 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

5'UTR (cg06250288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.54E+00 Statistic Test p-value: 3.48E-13; Z-score: -2.12E+01

Methylation in Case

4.90E-01 (Median) Methylation in Control 7.52E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

5'UTR (cg08644341)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.40E+00 Statistic Test p-value: 1.40E-08; Z-score: -1.81E+01

Methylation in Case

5.75E-01 (Median) Methylation in Control 8.02E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

5'UTR (cg09722408)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.21E+00 Statistic Test p-value: 1.38E-05; Z-score: -6.16E+00

Methylation in Case

7.33E-01 (Median) Methylation in Control 8.86E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.13E+00 Statistic Test p-value: 2.68E-05; Z-score: -6.70E+00

Methylation in Case

7.71E-01 (Median) Methylation in Control 8.74E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

5'UTR (cg02543796)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 1.79E-03; Z-score: -2.53E+00

Methylation in Case

7.57E-01 (Median) Methylation in Control 8.02E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg01550915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.11E+00 Statistic Test p-value: 7.79E-14; Z-score: -3.31E+01

Methylation in Case

3.78E-01 (Median) Methylation in Control 7.98E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg08490220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.72E+00 Statistic Test p-value: 1.16E-11; Z-score: -1.14E+01

Methylation in Case

3.61E-01 (Median) Methylation in Control 6.22E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.78E+00 Statistic Test p-value: 3.02E-10; Z-score: -1.07E+01

Methylation in Case

4.13E-01 (Median) Methylation in Control 7.38E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.30E+00 Statistic Test p-value: 4.41E-07; Z-score: -1.03E+01

Methylation in Case

6.54E-01 (Median) Methylation in Control 8.53E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg09954729)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.58E+00 Statistic Test p-value: 1.40E-06; Z-score: -7.64E+00

Methylation in Case

5.85E-01 (Median) Methylation in Control 9.26E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg08131081)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.19E+00 Statistic Test p-value: 3.42E-06; Z-score: -2.46E+01

Methylation in Case

7.78E-01 (Median) Methylation in Control 9.22E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg09263316)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.53E+00 Statistic Test p-value: 8.69E-06; Z-score: -1.41E+01

Methylation in Case

5.17E-01 (Median) Methylation in Control 7.94E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg02257312)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.21E+00 Statistic Test p-value: 1.43E-05; Z-score: -1.99E+01

Methylation in Case

7.39E-01 (Median) Methylation in Control 8.91E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 14

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg19754709)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.49E+00 Statistic Test p-value: 8.80E-05; Z-score: -4.57E+00

Methylation in Case

4.03E-01 (Median) Methylation in Control 5.98E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 15

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg06780216)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.24E+00 Statistic Test p-value: 1.25E-04; Z-score: -6.88E+00

Methylation in Case

6.90E-01 (Median) Methylation in Control 8.58E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 16

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg00644103)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.59E+00 Statistic Test p-value: 1.71E-04; Z-score: -4.60E+00

Methylation in Case

3.80E-01 (Median) Methylation in Control 6.07E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 17

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg05147509)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 1.73E-04; Z-score: 3.08E+00

Methylation in Case

8.00E-01 (Median) Methylation in Control 7.39E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 18

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 2.56E-04; Z-score: -2.07E+00

Methylation in Case

7.67E-01 (Median) Methylation in Control 7.96E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 19

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.34E+00 Statistic Test p-value: 2.97E-04; Z-score: -1.50E+01

Methylation in Case

3.88E-01 (Median) Methylation in Control 5.22E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 20

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg05218653)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.18E+00 Statistic Test p-value: 3.48E-04; Z-score: -1.34E+01

Methylation in Case

8.01E-01 (Median) Methylation in Control 9.44E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 21

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg09945896)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.16E+00 Statistic Test p-value: 9.52E-04; Z-score: -8.12E+00

Methylation in Case

6.75E-01 (Median) Methylation in Control 7.84E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 22

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg10275969)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.24E+00 Statistic Test p-value: 1.63E-03; Z-score: -2.97E+00

Methylation in Case

4.34E-01 (Median) Methylation in Control 5.38E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 23

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 2.29E-03; Z-score: -3.65E+00

Methylation in Case

8.26E-01 (Median) Methylation in Control 8.67E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 24

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg06933862)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 2.83E-03; Z-score: -4.74E+00

Methylation in Case

8.86E-01 (Median) Methylation in Control 9.26E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 25

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg07701514)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.26E+00 Statistic Test p-value: 4.08E-03; Z-score: -3.28E+00

Methylation in Case

3.86E-01 (Median) Methylation in Control 4.85E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 26

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.10E+00 Statistic Test p-value: 4.77E-03; Z-score: -6.20E+00

Methylation in Case

6.80E-01 (Median) Methylation in Control 7.51E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 27

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg05093254)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 5.57E-03; Z-score: -9.97E-01

Methylation in Case

9.77E-01 (Median) Methylation in Control 9.81E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 28

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg05654361)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.10E+00 Statistic Test p-value: 5.82E-03; Z-score: -3.00E+00

Methylation in Case

6.28E-01 (Median) Methylation in Control 6.94E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 29

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

Body (cg09481056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 3.17E-02; Z-score: -3.94E-01

Methylation in Case

7.48E-01 (Median) Methylation in Control 7.55E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 30

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

3'UTR (cg06335980)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.45E+00 Statistic Test p-value: 9.26E-08; Z-score: -1.42E+01

Methylation in Case

4.90E-01 (Median) Methylation in Control 7.11E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 31

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

3'UTR (cg07737682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.46E+00 Statistic Test p-value: 1.10E-05; Z-score: -5.82E+00

Methylation in Case

4.78E-01 (Median) Methylation in Control 6.98E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 32

Methylation of ABCA3 in bladder cancer [ 2 ]

Location

3'UTR (cg10154010)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 5.78E-03; Z-score: -1.96E+00

Methylation in Case

6.98E-01 (Median) Methylation in Control 8.01E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Breast cancer

         20 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in breast cancer [ 3 ]

Location

5'UTR (cg08644341)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.10E+00 Statistic Test p-value: 1.51E-09; Z-score: 1.73E+00

Methylation in Case

7.98E-01 (Median) Methylation in Control 7.24E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in breast cancer [ 3 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 4.36E-07; Z-score: -1.28E+00

Methylation in Case

8.43E-01 (Median) Methylation in Control 8.66E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in breast cancer [ 3 ]

Location

5'UTR (cg02543796)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 1.48E-02; Z-score: -6.98E-01

Methylation in Case

7.84E-01 (Median) Methylation in Control 8.22E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg10275969)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.38E+00 Statistic Test p-value: 4.44E-31; Z-score: 4.20E+00

Methylation in Case

7.38E-01 (Median) Methylation in Control 5.36E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg07701514)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.15E+00 Statistic Test p-value: 3.66E-10; Z-score: 1.63E+00

Methylation in Case

7.42E-01 (Median) Methylation in Control 6.44E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 2.49E-06; Z-score: -1.25E+00

Methylation in Case

7.40E-01 (Median) Methylation in Control 8.09E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg05654361)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.05E+00 Statistic Test p-value: 7.51E-06; Z-score: 1.08E+00

Methylation in Case

7.48E-01 (Median) Methylation in Control 7.14E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg10125193)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 1.56E-04; Z-score: -1.11E+00

Methylation in Case

7.90E-01 (Median) Methylation in Control 8.30E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.08E+00 Statistic Test p-value: 2.39E-04; Z-score: -1.07E+00

Methylation in Case

7.99E-01 (Median) Methylation in Control 8.61E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 5.36E-04; Z-score: -8.95E-01

Methylation in Case

9.06E-01 (Median) Methylation in Control 9.55E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg09681286)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.02E+00 Statistic Test p-value: 1.75E-03; Z-score: 2.85E-01

Methylation in Case

8.43E-01 (Median) Methylation in Control 8.29E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg09945896)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 2.12E-03; Z-score: 4.97E-01

Methylation in Case

8.14E-01 (Median) Methylation in Control 7.53E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 7.02E-03; Z-score: -6.84E-01

Methylation in Case

7.42E-01 (Median) Methylation in Control 7.66E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 14

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg20915212)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 1.12E-02; Z-score: -7.79E-01

Methylation in Case

7.07E-01 (Median) Methylation in Control 7.31E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 15

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 2.45E-02; Z-score: 6.30E-01

Methylation in Case

7.26E-01 (Median) Methylation in Control 6.95E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 16

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg06780216)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 2.78E-02; Z-score: -5.93E-01

Methylation in Case

8.23E-01 (Median) Methylation in Control 9.43E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 17

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 3.38E-02; Z-score: -3.37E-01

Methylation in Case

7.69E-01 (Median) Methylation in Control 7.82E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 18

Methylation of ABCA3 in breast cancer [ 3 ]

Location

Body (cg16463165)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.01E+00 Statistic Test p-value: 3.83E-02; Z-score: 2.51E-01

Methylation in Case

6.78E-01 (Median) Methylation in Control 6.70E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 19

Methylation of ABCA3 in breast cancer [ 3 ]

Location

3'UTR (cg06335980)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 2.81E-03; Z-score: 6.23E-01

Methylation in Case

7.86E-01 (Median) Methylation in Control 7.26E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 20

Methylation of ABCA3 in breast cancer [ 3 ]

Location

3'UTR (cg07737682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 2.92E-02; Z-score: 8.00E-01

Methylation in Case

7.08E-01 (Median) Methylation in Control 6.79E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Colon cancer

         10 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

5'UTR (cg03363743)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.35E+00 Statistic Test p-value: 3.62E-07; Z-score: 2.62E+00

Methylation in Case

5.03E-01 (Median) Methylation in Control 3.73E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

5'UTR (cg06250288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.16E+00 Statistic Test p-value: 8.05E-05; Z-score: -3.04E+00

Methylation in Case

6.18E-01 (Median) Methylation in Control 7.18E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

TSS1500 (cg01183122)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 4.27E-03; Z-score: -1.12E+00

Methylation in Case

8.13E-01 (Median) Methylation in Control 8.48E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

TSS200 (cg25307168)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.17E+00 Statistic Test p-value: 1.47E-07; Z-score: 1.59E+00

Methylation in Case

5.35E-01 (Median) Methylation in Control 4.58E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

TSS200 (cg02330121)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 4.13E+00 Statistic Test p-value: 9.01E-07; Z-score: 1.11E+01

Methylation in Case

2.78E-01 (Median) Methylation in Control 6.72E-02 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

TSS200 (cg16843423)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.91E+00 Statistic Test p-value: 1.02E-03; Z-score: 4.47E+00

Methylation in Case

1.37E-01 (Median) Methylation in Control 4.71E-02 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

Body (cg04849842)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.22E+00 Statistic Test p-value: 4.27E-10; Z-score: 5.72E+00

Methylation in Case

6.01E-01 (Median) Methylation in Control 2.70E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

Body (cg03645007)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.08E+00 Statistic Test p-value: 6.84E-04; Z-score: -1.81E+00

Methylation in Case

7.00E-01 (Median) Methylation in Control 7.56E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

Body (cg06094523)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.08E+00 Statistic Test p-value: 1.29E-03; Z-score: -7.13E-01

Methylation in Case

3.85E-01 (Median) Methylation in Control 4.16E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCA3 in colon adenocarcinoma [ 4 ]

Location

Body (cg21974358)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.17E+00 Statistic Test p-value: 3.76E-03; Z-score: 1.06E+00

Methylation in Case

6.51E-01 (Median) Methylation in Control 5.56E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Colorectal cancer

         33 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

5'UTR (cg08644341)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 1.60E-06; Z-score: -2.26E+00

Methylation in Case

8.66E-01 (Median) Methylation in Control 9.06E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

5'UTR (cg06250288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.07E+00 Statistic Test p-value: 2.33E-06; Z-score: -1.57E+00

Methylation in Case

7.87E-01 (Median) Methylation in Control 8.41E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 1.71E-03; Z-score: -8.81E-01

Methylation in Case

9.40E-01 (Median) Methylation in Control 9.48E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg00644103)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.14E+00 Statistic Test p-value: 3.56E-11; Z-score: -4.32E+00

Methylation in Case

7.69E-01 (Median) Methylation in Control 8.74E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg19754709)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.12E+00 Statistic Test p-value: 3.82E-10; Z-score: -3.86E+00

Methylation in Case

7.73E-01 (Median) Methylation in Control 8.69E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 6.24E-10; Z-score: -4.75E+00

Methylation in Case

7.74E-01 (Median) Methylation in Control 8.90E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 3.60E-09; Z-score: -2.53E+00

Methylation in Case

7.92E-01 (Median) Methylation in Control 8.65E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 3.11E-08; Z-score: -2.92E+00

Methylation in Case

8.58E-01 (Median) Methylation in Control 9.00E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg09481056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 7.29E-08; Z-score: -2.00E+00

Methylation in Case

8.79E-01 (Median) Methylation in Control 9.10E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg08490220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.10E+00 Statistic Test p-value: 1.12E-07; Z-score: -1.85E+00

Methylation in Case

6.99E-01 (Median) Methylation in Control 7.71E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg09945896)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.08E+00 Statistic Test p-value: 4.76E-07; Z-score: -3.09E+00

Methylation in Case

8.12E-01 (Median) Methylation in Control 8.73E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg09681286)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.11E+00 Statistic Test p-value: 6.34E-07; Z-score: -1.96E+00

Methylation in Case

7.85E-01 (Median) Methylation in Control 8.73E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg01550915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 6.76E-07; Z-score: -1.45E+00

Methylation in Case

7.99E-01 (Median) Methylation in Control 8.38E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 14

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg05218653)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 1.38E-05; Z-score: -1.16E+00

Methylation in Case

9.53E-01 (Median) Methylation in Control 9.69E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 15

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg09954729)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 2.17E-05; Z-score: -1.18E+00

Methylation in Case

9.06E-01 (Median) Methylation in Control 9.39E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 16

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg08131081)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 2.17E-05; Z-score: -1.46E+00

Methylation in Case

9.33E-01 (Median) Methylation in Control 9.44E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 17

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg07301574)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 7.53E-05; Z-score: -5.11E-02

Methylation in Case

9.17E-01 (Median) Methylation in Control 9.17E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 18

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg16463165)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 8.38E-05; Z-score: -1.35E+00

Methylation in Case

8.07E-01 (Median) Methylation in Control 8.51E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 19

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 1.66E-04; Z-score: -4.26E-01

Methylation in Case

9.07E-01 (Median) Methylation in Control 9.11E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 20

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg06780216)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 3.37E-04; Z-score: -1.44E+00

Methylation in Case

9.42E-01 (Median) Methylation in Control 9.53E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 21

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 4.40E-04; Z-score: -2.35E+00

Methylation in Case

9.16E-01 (Median) Methylation in Control 9.33E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 22

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg05814755)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 4.94E-04; Z-score: -1.11E+00

Methylation in Case

9.15E-01 (Median) Methylation in Control 9.31E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 23

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg09263316)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 6.21E-04; Z-score: -5.96E-01

Methylation in Case

8.85E-01 (Median) Methylation in Control 9.03E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 24

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg06933862)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 2.75E-03; Z-score: -8.34E-01

Methylation in Case

9.52E-01 (Median) Methylation in Control 9.58E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 25

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg07701514)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 3.16E-03; Z-score: -6.23E-01

Methylation in Case

7.78E-01 (Median) Methylation in Control 8.02E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 26

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg10125193)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 4.00E-03; Z-score: -6.12E-01

Methylation in Case

8.93E-01 (Median) Methylation in Control 9.04E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 27

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg02257312)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 7.76E-03; Z-score: -8.30E-01

Methylation in Case

9.27E-01 (Median) Methylation in Control 9.35E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 28

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.00E+00 Statistic Test p-value: 3.44E-02; Z-score: 2.08E-02

Methylation in Case

9.65E-01 (Median) Methylation in Control 9.64E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 29

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg05824333)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 3.81E-02; Z-score: -7.23E-02

Methylation in Case

9.66E-01 (Median) Methylation in Control 9.67E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 30

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

Body (cg02124920)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 4.04E-02; Z-score: -2.36E-01

Methylation in Case

8.90E-01 (Median) Methylation in Control 8.96E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 31

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

3'UTR (cg07737682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 2.13E-06; Z-score: -2.53E+00

Methylation in Case

8.39E-01 (Median) Methylation in Control 8.77E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 32

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

3'UTR (cg10154010)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 9.81E-03; Z-score: -9.16E-01

Methylation in Case

9.27E-01 (Median) Methylation in Control 9.45E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 33

Methylation of ABCA3 in colorectal cancer [ 5 ]

Location

3'UTR (cg06335980)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 2.75E-02; Z-score: -2.25E-01

Methylation in Case

8.34E-01 (Median) Methylation in Control 8.40E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Hepatocellular carcinoma

         34 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.11E+00 Statistic Test p-value: 2.80E-08; Z-score: -2.20E+00

Methylation in Case

7.65E-01 (Median) Methylation in Control 8.47E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg04783228)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.07E+00 Statistic Test p-value: 5.60E-08; Z-score: -9.48E-01

Methylation in Case

7.52E-01 (Median) Methylation in Control 8.06E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg02543796)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 5.69E-04; Z-score: -7.48E-01

Methylation in Case

8.09E-01 (Median) Methylation in Control 8.21E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

TSS200 (cg13286281)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.94E+00 Statistic Test p-value: 2.28E-10; Z-score: 4.15E+00

Methylation in Case

2.92E-01 (Median) Methylation in Control 1.50E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg02883668)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.72E+00 Statistic Test p-value: 1.33E-17; Z-score: -2.57E+00

Methylation in Case

2.20E-01 (Median) Methylation in Control 3.79E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg10246871)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.52E+00 Statistic Test p-value: 3.82E-17; Z-score: -1.33E+01

Methylation in Case

5.68E-01 (Median) Methylation in Control 8.65E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg16455444)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.92E+00 Statistic Test p-value: 1.38E-16; Z-score: -6.12E+00

Methylation in Case

3.08E-01 (Median) Methylation in Control 5.92E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg23093692)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.62E+00 Statistic Test p-value: 2.04E-16; Z-score: -4.02E+00

Methylation in Case

4.77E-01 (Median) Methylation in Control 7.73E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg16535035)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.51E+00 Statistic Test p-value: 1.33E-15; Z-score: -4.82E+00

Methylation in Case

5.04E-01 (Median) Methylation in Control 7.61E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg17655346)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.42E+00 Statistic Test p-value: 6.87E-14; Z-score: -6.11E+00

Methylation in Case

5.54E-01 (Median) Methylation in Control 7.88E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg02287939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.27E+00 Statistic Test p-value: 5.21E-12; Z-score: -1.58E+01

Methylation in Case

7.66E-01 (Median) Methylation in Control 9.75E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg04912273)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 5.86E-12; Z-score: 1.59E+00

Methylation in Case

7.61E-01 (Median) Methylation in Control 7.03E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg16523422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.29E+00 Statistic Test p-value: 4.67E-11; Z-score: -2.97E+00

Methylation in Case

6.21E-01 (Median) Methylation in Control 8.01E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 14

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg10810847)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.91E+00 Statistic Test p-value: 1.01E-10; Z-score: 5.49E+00

Methylation in Case

3.46E-01 (Median) Methylation in Control 1.82E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 15

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg08943004)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.12E+00 Statistic Test p-value: 1.41E-10; Z-score: -6.28E+00

Methylation in Case

8.52E-01 (Median) Methylation in Control 9.55E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 16

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.19E+00 Statistic Test p-value: 2.34E-09; Z-score: -3.42E+00

Methylation in Case

6.50E-01 (Median) Methylation in Control 7.71E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 17

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg02257312)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.14E+00 Statistic Test p-value: 3.18E-09; Z-score: -5.03E+00

Methylation in Case

7.61E-01 (Median) Methylation in Control 8.67E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 18

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg09263316)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.16E+00 Statistic Test p-value: 1.44E-08; Z-score: -2.00E+00

Methylation in Case

6.85E-01 (Median) Methylation in Control 7.95E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 19

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.12E+00 Statistic Test p-value: 2.17E-08; Z-score: -3.17E+00

Methylation in Case

7.63E-01 (Median) Methylation in Control 8.55E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 20

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg05093254)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.08E+00 Statistic Test p-value: 4.27E-08; Z-score: -6.51E+00

Methylation in Case

9.02E-01 (Median) Methylation in Control 9.71E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 21

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg10125193)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.12E+00 Statistic Test p-value: 8.33E-08; Z-score: -2.73E+00

Methylation in Case

7.31E-01 (Median) Methylation in Control 8.22E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 22

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg05824333)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 4.26E-07; Z-score: -4.04E+00

Methylation in Case

9.16E-01 (Median) Methylation in Control 9.54E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 23

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg05814755)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 5.10E-07; Z-score: -1.59E+00

Methylation in Case

7.86E-01 (Median) Methylation in Control 8.28E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 24

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg07301574)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 1.31E-06; Z-score: -2.42E+00

Methylation in Case

7.41E-01 (Median) Methylation in Control 7.86E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 25

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg09632163)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 2.00E-06; Z-score: -1.63E+00

Methylation in Case

9.24E-01 (Median) Methylation in Control 9.54E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 26

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg09481056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.07E+00 Statistic Test p-value: 2.10E-06; Z-score: -1.42E+00

Methylation in Case

7.62E-01 (Median) Methylation in Control 8.15E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 27

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.10E+00 Statistic Test p-value: 2.10E-06; Z-score: -1.45E+00

Methylation in Case

6.72E-01 (Median) Methylation in Control 7.37E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 28

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 3.28E-06; Z-score: -7.80E-01

Methylation in Case

9.30E-01 (Median) Methylation in Control 9.63E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 29

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg05147509)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 5.36E-05; Z-score: -3.96E-01

Methylation in Case

7.78E-01 (Median) Methylation in Control 8.19E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 30

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg01491428)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.49E+00 Statistic Test p-value: 2.95E-04; Z-score: -7.03E-01

Methylation in Case

3.66E-01 (Median) Methylation in Control 5.45E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 31

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 1.90E-03; Z-score: -1.69E-01

Methylation in Case

7.61E-01 (Median) Methylation in Control 7.78E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 32

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg20915212)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.01E+00 Statistic Test p-value: 2.95E-02; Z-score: 2.01E-01

Methylation in Case

6.88E-01 (Median) Methylation in Control 6.82E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 33

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

3'UTR (cg07737682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.17E+00 Statistic Test p-value: 3.72E-08; Z-score: -3.19E+00

Methylation in Case

5.84E-01 (Median) Methylation in Control 6.84E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 34

Methylation of ABCA3 in hepatocellular carcinoma [ 6 ]

Location

3'UTR (cg10154010)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 2.21E-04; Z-score: -2.84E-01

Methylation in Case

8.90E-01 (Median) Methylation in Control 9.01E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  HIV infection

         16 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in HIV infection [ 7 ]

Location

5'UTR (cg06250288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 3.41E-03; Z-score: -1.03E+00

Methylation in Case

7.96E-01 (Median) Methylation in Control 8.25E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in HIV infection [ 7 ]

Location

5'UTR (cg08644341)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 8.18E-03; Z-score: -7.14E-01

Methylation in Case

9.05E-01 (Median) Methylation in Control 9.20E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg09481056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.19E+00 Statistic Test p-value: 3.22E-18; Z-score: 3.15E+00

Methylation in Case

8.08E-01 (Median) Methylation in Control 6.81E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg10125193)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 1.38E-07; Z-score: 1.04E+00

Methylation in Case

8.62E-01 (Median) Methylation in Control 8.37E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 6.68E-07; Z-score: 1.41E+00

Methylation in Case

7.90E-01 (Median) Methylation in Control 7.40E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg09263316)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 1.38E-06; Z-score: -1.85E+00

Methylation in Case

8.66E-01 (Median) Methylation in Control 9.06E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg05147509)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 2.63E-04; Z-score: 7.71E-01

Methylation in Case

8.61E-01 (Median) Methylation in Control 8.37E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg08490220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 2.71E-04; Z-score: -1.59E+00

Methylation in Case

7.48E-01 (Median) Methylation in Control 7.87E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 3.08E-03; Z-score: -8.01E-01

Methylation in Case

8.25E-01 (Median) Methylation in Control 8.46E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg05093254)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 4.88E-03; Z-score: -8.67E-01

Methylation in Case

9.91E-01 (Median) Methylation in Control 9.94E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 1.16E-02; Z-score: -1.08E+00

Methylation in Case

8.63E-01 (Median) Methylation in Control 8.90E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.00E+00 Statistic Test p-value: 1.56E-02; Z-score: 4.64E-01

Methylation in Case

9.81E-01 (Median) Methylation in Control 9.76E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg07301574)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.01E+00 Statistic Test p-value: 1.65E-02; Z-score: 3.87E-01

Methylation in Case

8.31E-01 (Median) Methylation in Control 8.23E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 14

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg09632163)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.01E+00 Statistic Test p-value: 1.92E-02; Z-score: 6.66E-01

Methylation in Case

9.37E-01 (Median) Methylation in Control 9.25E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 15

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg19754709)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 2.57E-02; Z-score: -7.62E-01

Methylation in Case

8.13E-01 (Median) Methylation in Control 8.33E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 16

Methylation of ABCA3 in HIV infection [ 7 ]

Location

Body (cg05218653)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 4.36E-02; Z-score: -1.61E-01

Methylation in Case

9.91E-01 (Median) Methylation in Control 9.91E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Lung adenocarcinoma

         13 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 5.86E-03; Z-score: 1.65E+00

Methylation in Case

8.44E-01 (Median) Methylation in Control 7.90E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

5'UTR (cg02543796)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 2.67E-02; Z-score: 7.42E-01

Methylation in Case

8.06E-01 (Median) Methylation in Control 7.76E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg19754709)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 1.03E-03; Z-score: -2.07E+00

Methylation in Case

7.77E-01 (Median) Methylation in Control 8.21E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 4.89E-03; Z-score: 1.29E+00

Methylation in Case

7.48E-01 (Median) Methylation in Control 6.94E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg09263316)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 6.69E-03; Z-score: -3.41E+00

Methylation in Case

8.30E-01 (Median) Methylation in Control 8.77E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.06E+00 Statistic Test p-value: 6.87E-03; Z-score: 1.87E+00

Methylation in Case

9.21E-01 (Median) Methylation in Control 8.69E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.08E+00 Statistic Test p-value: 8.98E-03; Z-score: -6.39E+00

Methylation in Case

7.90E-01 (Median) Methylation in Control 8.54E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.10E+00 Statistic Test p-value: 1.53E-02; Z-score: -3.35E+00

Methylation in Case

7.40E-01 (Median) Methylation in Control 8.18E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg00644103)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 2.69E-02; Z-score: -2.48E+00

Methylation in Case

8.04E-01 (Median) Methylation in Control 8.34E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg07701514)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.05E+00 Statistic Test p-value: 3.36E-02; Z-score: 8.23E-01

Methylation in Case

7.94E-01 (Median) Methylation in Control 7.58E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg06933862)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 3.75E-02; Z-score: -8.77E-01

Methylation in Case

9.20E-01 (Median) Methylation in Control 9.27E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg09954729)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 3.82E-02; Z-score: -1.95E+00

Methylation in Case

9.45E-01 (Median) Methylation in Control 9.60E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCA3 in lung adenocarcinoma [ 8 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 4.07E-02; Z-score: -1.09E+00

Methylation in Case

8.68E-01 (Median) Methylation in Control 8.85E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Panic disorder

           4 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in panic disorder [ 9 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.05E+00 Statistic Test p-value: 2.83E-02; Z-score: 3.79E-01

Methylation in Case

3.67E+00 (Median) Methylation in Control 3.50E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in panic disorder [ 9 ]

Location

Body (cg06933862)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 7.79E-03; Z-score: -4.72E-01

Methylation in Case

4.53E+00 (Median) Methylation in Control 4.69E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in panic disorder [ 9 ]

Location

Body (cg16463165)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.12E+00 Statistic Test p-value: 1.35E-02; Z-score: 3.92E-01

Methylation in Case

1.86E+00 (Median) Methylation in Control 1.67E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in panic disorder [ 9 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.11E+00 Statistic Test p-value: 2.12E-02; Z-score: 4.64E-01

Methylation in Case

1.72E+00 (Median) Methylation in Control 1.55E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Papillary thyroid cancer

         13 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 6.08E-06; Z-score: -1.33E+00

Methylation in Case

6.99E-01 (Median) Methylation in Control 8.03E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg05147509)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 2.80E-07; Z-score: 1.51E+00

Methylation in Case

8.19E-01 (Median) Methylation in Control 7.69E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 1.01E-04; Z-score: -7.42E-01

Methylation in Case

8.36E-01 (Median) Methylation in Control 8.54E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg08131081)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 3.41E-04; Z-score: -9.00E-01

Methylation in Case

9.09E-01 (Median) Methylation in Control 9.20E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg02124920)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.02E+00 Statistic Test p-value: 4.74E-04; Z-score: 4.64E-01

Methylation in Case

8.25E-01 (Median) Methylation in Control 8.12E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg06780216)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.02E+00 Statistic Test p-value: 6.22E-04; Z-score: 7.52E-01

Methylation in Case

8.93E-01 (Median) Methylation in Control 8.74E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 3.93E-03; Z-score: -4.68E-01

Methylation in Case

8.76E-01 (Median) Methylation in Control 8.86E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg08490220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 6.46E-03; Z-score: -5.25E-01

Methylation in Case

7.60E-01 (Median) Methylation in Control 7.76E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 1.07E-02; Z-score: -6.58E-01

Methylation in Case

9.09E-01 (Median) Methylation in Control 9.20E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg07753939)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.01E+00 Statistic Test p-value: 1.34E-02; Z-score: 3.57E-01

Methylation in Case

9.14E-01 (Median) Methylation in Control 9.08E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg16463165)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 1.45E-02; Z-score: 5.40E-01

Methylation in Case

7.37E-01 (Median) Methylation in Control 7.13E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 2.76E-02; Z-score: -1.94E-01

Methylation in Case

9.05E-01 (Median) Methylation in Control 9.11E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCA3 in papillary thyroid cancer [ 10 ]

Location

Body (cg08449748)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 2.88E-02; Z-score: 5.42E-01

Methylation in Case

7.50E-01 (Median) Methylation in Control 7.21E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Systemic lupus erythematosus

         11 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

5'UTR (cg06250288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 1.76E-03; Z-score: -1.18E-01

Methylation in Case

8.22E-01 (Median) Methylation in Control 8.27E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

5'UTR (cg08644341)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 2.90E-02; Z-score: -1.21E-01

Methylation in Case

8.96E-01 (Median) Methylation in Control 9.00E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg09632163)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 5.54E-03; Z-score: -1.46E-01

Methylation in Case

9.28E-01 (Median) Methylation in Control 9.31E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 5.84E-03; Z-score: -2.33E-01

Methylation in Case

8.50E-01 (Median) Methylation in Control 8.61E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg08322747)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 8.42E-03; Z-score: -2.02E-01

Methylation in Case

9.62E-01 (Median) Methylation in Control 9.64E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg01491428)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 9.47E-03; Z-score: -7.72E-02

Methylation in Case

8.16E-01 (Median) Methylation in Control 8.28E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg01278797)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 1.46E-02; Z-score: -1.94E-01

Methylation in Case

8.95E-01 (Median) Methylation in Control 9.00E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg02715407)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 2.92E-02; Z-score: -1.89E-01

Methylation in Case

8.39E-01 (Median) Methylation in Control 8.49E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg02257312)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 3.45E-02; Z-score: -2.02E-01

Methylation in Case

9.21E-01 (Median) Methylation in Control 9.25E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

Body (cg06780216)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 4.29E-02; Z-score: -8.84E-02

Methylation in Case

9.44E-01 (Median) Methylation in Control 9.45E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCA3 in systemic lupus erythematosus [ 11 ]

Location

3'UTR (cg07737682)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 4.52E-02; Z-score: -1.94E-01

Methylation in Case

8.28E-01 (Median) Methylation in Control 8.36E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Pancretic ductal adenocarcinoma

         18 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS1500 (cg18290624)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.71E+00 Statistic Test p-value: 7.35E-12; Z-score: 2.34E+00

Methylation in Case

4.46E-01 (Median) Methylation in Control 2.61E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS1500 (cg23338195)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.07E+00 Statistic Test p-value: 4.82E-06; Z-score: -7.51E-01

Methylation in Case

6.34E-01 (Median) Methylation in Control 6.78E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS1500 (cg14762670)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.10E+00 Statistic Test p-value: 1.30E-03; Z-score: -7.29E-01

Methylation in Case

3.32E-01 (Median) Methylation in Control 3.65E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS1500 (cg21762534)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.22E+00 Statistic Test p-value: 2.44E-03; Z-score: -6.99E-01

Methylation in Case

9.11E-02 (Median) Methylation in Control 1.12E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS1500 (cg15916061)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.20E+00 Statistic Test p-value: 1.20E-02; Z-score: 9.51E-01

Methylation in Case

5.42E-01 (Median) Methylation in Control 4.53E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS1500 (cg23053624)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 1.68E-02; Z-score: -3.17E-01

Methylation in Case

8.11E-02 (Median) Methylation in Control 8.61E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS200 (cg18555069)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.64E+00 Statistic Test p-value: 3.66E-16; Z-score: 1.95E+00

Methylation in Case

4.71E-02 (Median) Methylation in Control 2.88E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

TSS200 (cg23825213)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.11E+00 Statistic Test p-value: 3.52E-04; Z-score: 9.10E-01

Methylation in Case

6.86E-01 (Median) Methylation in Control 6.20E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg19980199)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+00 Statistic Test p-value: 7.91E-10; Z-score: 1.83E+00

Methylation in Case

7.72E-01 (Median) Methylation in Control 6.56E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg02079831)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.11E+00 Statistic Test p-value: 1.65E-06; Z-score: 5.89E-01

Methylation in Case

2.84E-01 (Median) Methylation in Control 2.57E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg18445760)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.06E+00 Statistic Test p-value: 1.77E-05; Z-score: 9.44E-01

Methylation in Case

8.36E-01 (Median) Methylation in Control 7.88E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg04524933)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.06E+00 Statistic Test p-value: 2.12E-04; Z-score: 8.81E-01

Methylation in Case

9.10E-01 (Median) Methylation in Control 8.57E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg26090940)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.13E+00 Statistic Test p-value: 3.80E-03; Z-score: 7.49E-01

Methylation in Case

6.41E-01 (Median) Methylation in Control 5.69E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 14

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg07396272)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 8.72E-03; Z-score: 1.07E+00

Methylation in Case

8.13E-01 (Median) Methylation in Control 7.62E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 15

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg11977139)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 1.10E-02; Z-score: -4.47E-01

Methylation in Case

8.62E-01 (Median) Methylation in Control 8.74E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 16

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg06342870)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 1.44E-02; Z-score: -3.75E-01

Methylation in Case

9.09E-01 (Median) Methylation in Control 9.13E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 17

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

Body (cg00153543)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 4.89E-02; Z-score: -4.40E-03

Methylation in Case

6.90E-01 (Median) Methylation in Control 6.90E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 18

Methylation of ABCA3 in pancretic ductal adenocarcinoma [ 12 ]

Location

3'UTR (cg20733663)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 1.48E-04; Z-score: -5.69E-01

Methylation in Case

5.73E-01 (Median) Methylation in Control 5.92E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Prostate cancer

           4 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in prostate cancer [ 13 ]

Location

TSS1500 (cg09941770)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.50E+00 Statistic Test p-value: 2.66E-02; Z-score: 1.44E+01

Methylation in Case

2.47E-01 (Median) Methylation in Control 9.89E-02 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in prostate cancer [ 13 ]

Location

TSS200 (cg16552454)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.39E+00 Statistic Test p-value: 1.28E-03; Z-score: 3.95E+01

Methylation in Case

6.05E-01 (Median) Methylation in Control 2.53E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in prostate cancer [ 13 ]

Location

Body (cg09226986)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.58E+00 Statistic Test p-value: 1.94E-03; Z-score: 3.49E+00

Methylation in Case

7.89E-01 (Median) Methylation in Control 5.01E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in prostate cancer [ 13 ]

Location

Body (cg15992711)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.31E+00 Statistic Test p-value: 3.10E-02; Z-score: -5.41E+00

Methylation in Case

4.00E-01 (Median) Methylation in Control 5.24E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Renal cell carcinoma

         11 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg05147509)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 6.08E-16; Z-score: 2.64E+00

Methylation in Case

8.71E-01 (Median) Methylation in Control 8.04E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg10125193)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 7.54E-09; Z-score: 2.13E+00

Methylation in Case

9.32E-01 (Median) Methylation in Control 9.01E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg05824333)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.01E+00 Statistic Test p-value: 8.06E-08; Z-score: 1.24E+00

Methylation in Case

9.72E-01 (Median) Methylation in Control 9.62E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg09681286)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.21E+00 Statistic Test p-value: 5.40E-07; Z-score: 3.35E+00

Methylation in Case

8.96E-01 (Median) Methylation in Control 7.43E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg09945896)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 3.23E-04; Z-score: 1.95E+00

Methylation in Case

8.76E-01 (Median) Methylation in Control 8.18E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg08322747)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 4.31E-03; Z-score: -4.20E-01

Methylation in Case

9.72E-01 (Median) Methylation in Control 9.74E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg00039478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 6.48E-03; Z-score: -4.87E-01

Methylation in Case

8.82E-01 (Median) Methylation in Control 8.90E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg07301574)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 8.65E-03; Z-score: 2.16E+00

Methylation in Case

9.06E-01 (Median) Methylation in Control 8.48E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg08490220)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 2.62E-02; Z-score: -5.22E-01

Methylation in Case

8.13E-01 (Median) Methylation in Control 8.27E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg05654361)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.12E+00 Statistic Test p-value: 2.94E-02; Z-score: 1.69E+00

Methylation in Case

8.53E-01 (Median) Methylation in Control 7.61E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCA3 in clear cell renal cell carcinoma [ 14 ]

Location

Body (cg20915212)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.02E+00 Statistic Test p-value: 4.44E-02; Z-score: 8.25E-01

Methylation in Case

8.11E-01 (Median) Methylation in Control 7.97E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Depression

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCA3 in depression [ 15 ]

Location

Body (cg05824333)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.00E+00 Statistic Test p-value: 1.80E-02; Z-score: 4.32E-02

Methylation in Case

9.52E-01 (Median) Methylation in Control 9.52E-01 (Median)

Studied Phenotype

Depression [ ICD-11: 6A8Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCA3 in depression [ 15 ]

Location

Body (cg04058100)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 4.13E-02; Z-score: -4.57E-01

Methylation in Case

8.58E-01 (Median) Methylation in Control 8.66E-01 (Median)

Studied Phenotype

Depression [ ICD-11: 6A8Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCA3 in depression [ 15 ]

Location

Body (cg04149930)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 4.34E-02; Z-score: -2.58E-01

Methylation in Case

6.77E-01 (Median) Methylation in Control 6.84E-01 (Median)

Studied Phenotype

Depression [ ICD-11: 6A8Z]

Experimental Material

Patient tissue samples

microRNA

  Unclear Phenotype

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

miR-20a directly targets ABCA3 [ 16 ]

Epigenetic Type

microRNA Experiment Method CLASH

miRNA Stemloop ID

miR-20a miRNA Mature ID miR-20a-5p

miRNA Sequence

UAAAGUGCUUAUAGUGCAGGUAG

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 2

miR-335 directly targets ABCA3 [ 17 ]

Epigenetic Type

microRNA Experiment Method Microarray

miRNA Stemloop ID

miR-335 miRNA Mature ID miR-335-5p

miRNA Sequence

UCAAGAGCAAUAACGAAAAAUGU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 3

miR-409 directly targets ABCA3 [ 18 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-409 miRNA Mature ID miR-409-5p

miRNA Sequence

AGGUUACCCGAGCAACUUUGCAU

miRNA Target Type

Direct

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

miR-92a directly targets ABCA3 [ 16 ]

Epigenetic Type

microRNA Experiment Method CLASH

miRNA Stemloop ID

miR-92a miRNA Mature ID miR-92a-3p

miRNA Sequence

UAUUGCACUUGUCCCGGCCUGU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 5

miR-92b directly targets ABCA3 [ 16 ]

Epigenetic Type

microRNA Experiment Method CLASH

miRNA Stemloop ID

miR-92b miRNA Mature ID miR-92b-3p

miRNA Sequence

UAUUGCACUCGUCCCGGCCUCC

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)
References
1 Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes. Cancer Cell. 2016 Mar 14;29(3):379-393.
2 DNA Methylation Dynamics in Urological Tumors.
3 Genome-wide Scan for Methylation Profiles in Breast Cancer
4 Genome-scale analysis of DNA methylation in colorectal cancer using Infinium HumanMethylation450 BeadChips. Epigenetics. 2013 Sep;8(9):921-34.
5 Differences in DNA methylation signatures reveal multiple pathways of progression from adenoma to colorectal cancer. Gastroenterology. 2014 Aug;147(2):418-29.e8.
6 Exploring genome-wide DNA methylation profiles altered in hepatocellular carcinoma using Infinium HumanMethylation 450 BeadChips. Epigenetics. 2013 Jan;8(1):34-43.
7 HIV-1 Infection Accelerates Age According to the Epigenetic Clock. J Infect Dis. 2015 Nov 15;212(10):1563-73.
8 DNA methylation analysis of lung adenocarcinoma and adjacent non-tumor tissues
9 DNA Methylation signatures in panic disorder. Transl Psychiatry. 2017 Dec 18;7(12):1287.
10 Prognostic Classifier Based on Genome-Wide DNA Methylation Profiling in Well-Differentiated Thyroid Tumors. J Clin Endocrinol Metab. 2017 Nov 1;102(11):4089-4099.
11 Genome-wide DNA methylation analysis of systemic lupus erythematosus reveals persistent hypomethylation of interferon genes and compositional changes to CD4+ T-cell populations. PLoS Genet. 2013;9(8):e1003678.
12 Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling. Int J Cancer. 2014 Sep 1;135(5):1110-8.
13 Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array. BMC Genomics. 2014 Jan 22;15:51.
14 A CpG-methylation-based assay to predict survival in clear cell renal cell carcinoma. Nat Commun. 2015 Oct 30;6:8699.
15 DNA methylation and inflammation marker profiles associated with a history of depression. Hum Mol Genet. 2018 Aug 15;27(16):2840-2850.
16 Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding. Cell. 2013 Apr 25;153(3):654-65.
17 Endogenous human microRNAs that suppress breast cancer metastasis. Nature. 2008 Jan 10;451(7175):147-52.
18 Epigenetic regulation of the DLK1-MEG3 microRNA cluster in human type 2 diabetic islets. Cell Metab. 2014 Jan 7;19(1):135-45.

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