General Information of Drug Transporter (DT)
DT ID DTD0269 Transporter Info
Gene Name SLC30A1
Transporter Name Zinc transporter 1
Gene ID
7779
UniProt ID
Q9Y6M5
Epigenetic Regulations of This DT (EGR)

Methylation

  Colon cancer

           6 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC30A1 in colon adenocarcinoma [ 1 ]

Location

5'UTR (cg22855020)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.21E+00 Statistic Test p-value: 6.95E-07; Z-score: 1.59E+00

Methylation in Case

7.64E-01 (Median) Methylation in Control 6.34E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC30A1 in colon adenocarcinoma [ 1 ]

Location

5'UTR (cg08900781)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 2.39E-03; Z-score: -1.45E+00

Methylation in Case

8.53E-01 (Median) Methylation in Control 8.79E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC30A1 in colon adenocarcinoma [ 1 ]

Location

TSS1500 (cg15523238)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.50E+00 Statistic Test p-value: 3.15E-05; Z-score: 1.61E+00

Methylation in Case

5.19E-01 (Median) Methylation in Control 3.45E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC30A1 in colon adenocarcinoma [ 1 ]

Location

Body (cg07519873)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.67E+00 Statistic Test p-value: 3.26E-04; Z-score: 2.51E+00

Methylation in Case

3.87E-01 (Median) Methylation in Control 2.32E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC30A1 in colon adenocarcinoma [ 1 ]

Location

Body (cg21212995)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.19E+00 Statistic Test p-value: 1.55E-03; Z-score: 1.81E+00

Methylation in Case

3.46E-01 (Median) Methylation in Control 2.91E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC30A1 in colon adenocarcinoma [ 1 ]

Location

Body (cg11760099)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.05E+00 Statistic Test p-value: 2.20E-03; Z-score: 5.20E-01

Methylation in Case

8.42E-01 (Median) Methylation in Control 8.03E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Bladder cancer

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC30A1 in bladder cancer [ 2 ]

Location

TSS1500 (cg24598094)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.32E+00 Statistic Test p-value: 4.17E-04; Z-score: -2.79E+00

Methylation in Case

4.38E-01 (Median) Methylation in Control 5.77E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC30A1 in bladder cancer [ 2 ]

Location

TSS1500 (cg01575408)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.25E+00 Statistic Test p-value: 1.24E-03; Z-score: -2.80E+00

Methylation in Case

4.55E-02 (Median) Methylation in Control 5.68E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC30A1 in bladder cancer [ 2 ]

Location

1stExon (cg19652869)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.12E+00 Statistic Test p-value: 4.27E-03; Z-score: -1.49E+00

Methylation in Case

6.23E-02 (Median) Methylation in Control 6.97E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC30A1 in bladder cancer [ 2 ]

Location

1stExon (cg24162367)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.39E+00 Statistic Test p-value: 2.88E-02; Z-score: -1.11E+00

Methylation in Case

2.29E-02 (Median) Methylation in Control 3.19E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC30A1 in bladder cancer [ 2 ]

Location

Body (cg12405231)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 3.62E-05; Z-score: -4.61E+00

Methylation in Case

8.17E-01 (Median) Methylation in Control 8.88E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Renal cell carcinoma

           6 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC30A1 in clear cell renal cell carcinoma [ 3 ]

Location

TSS1500 (cg19267867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.07E+00 Statistic Test p-value: 1.86E-03; Z-score: -4.08E-01

Methylation in Case

2.97E-02 (Median) Methylation in Control 3.17E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC30A1 in clear cell renal cell carcinoma [ 3 ]

Location

TSS1500 (cg25466974)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 9.96E-03; Z-score: -5.38E-01

Methylation in Case

2.57E-02 (Median) Methylation in Control 2.80E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC30A1 in clear cell renal cell carcinoma [ 3 ]

Location

TSS1500 (cg05152717)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.10E+00 Statistic Test p-value: 1.47E-02; Z-score: 4.73E-01

Methylation in Case

2.73E-02 (Median) Methylation in Control 2.49E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC30A1 in clear cell renal cell carcinoma [ 3 ]

Location

Body (cg01143423)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.24E+00 Statistic Test p-value: 2.85E-07; Z-score: 1.42E+00

Methylation in Case

2.20E-02 (Median) Methylation in Control 1.77E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC30A1 in clear cell renal cell carcinoma [ 3 ]

Location

Body (cg03763950)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.24E+00 Statistic Test p-value: 1.03E-04; Z-score: 7.39E-01

Methylation in Case

2.11E-02 (Median) Methylation in Control 1.71E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC30A1 in clear cell renal cell carcinoma [ 3 ]

Location

Body (cg04976746)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.06E+00 Statistic Test p-value: 1.65E-02; Z-score: 5.97E-01

Methylation in Case

2.64E-02 (Median) Methylation in Control 2.49E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Colorectal cancer

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC30A1 in colorectal cancer [ 4 ]

Location

TSS1500 (cg05152717)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.14E+00 Statistic Test p-value: 2.14E-02; Z-score: 8.14E-01

Methylation in Case

1.04E-01 (Median) Methylation in Control 9.17E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC30A1 in colorectal cancer [ 4 ]

Location

TSS1500 (cg13976045)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.10E+00 Statistic Test p-value: 4.92E-02; Z-score: 4.93E-01

Methylation in Case

3.47E-02 (Median) Methylation in Control 3.15E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC30A1 in colorectal cancer [ 4 ]

Location

1stExon (cg24162367)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.12E+00 Statistic Test p-value: 1.95E-02; Z-score: -6.97E-01

Methylation in Case

2.17E-02 (Median) Methylation in Control 2.43E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC30A1 in colorectal cancer [ 4 ]

Location

Body (cg04976746)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.25E+00 Statistic Test p-value: 7.68E-03; Z-score: -7.99E-01

Methylation in Case

2.47E-02 (Median) Methylation in Control 3.09E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC30A1 in colorectal cancer [ 4 ]

Location

Body (cg01143423)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.11E+00 Statistic Test p-value: 3.29E-02; Z-score: 5.74E-01

Methylation in Case

9.60E-02 (Median) Methylation in Control 8.64E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Hepatocellular carcinoma

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC30A1 in hepatocellular carcinoma [ 5 ]

Location

TSS1500 (cg24598094)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.67E+00 Statistic Test p-value: 2.85E-09; Z-score: -1.61E+00

Methylation in Case

3.18E-01 (Median) Methylation in Control 5.30E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC30A1 in hepatocellular carcinoma [ 5 ]

Location

Body (cg03763950)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.13E+00 Statistic Test p-value: 1.42E-04; Z-score: -5.82E-01

Methylation in Case

5.91E-02 (Median) Methylation in Control 6.70E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  HIV infection

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC30A1 in HIV infection [ 6 ]

Location

TSS1500 (cg13976045)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.12E+00 Statistic Test p-value: 4.80E-02; Z-score: 4.71E-01

Methylation in Case

4.55E-02 (Median) Methylation in Control 4.07E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC30A1 in HIV infection [ 6 ]

Location

Body (cg03763950)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.17E+00 Statistic Test p-value: 4.11E-03; Z-score: -5.90E-01

Methylation in Case

8.72E-02 (Median) Methylation in Control 1.02E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC30A1 in HIV infection [ 6 ]

Location

Body (cg12405231)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 4.34E-03; Z-score: -6.57E-01

Methylation in Case

9.34E-01 (Median) Methylation in Control 9.50E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Papillary thyroid cancer

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC30A1 in papillary thyroid cancer [ 7 ]

Location

TSS1500 (cg13976045)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 1.76E-02; Z-score: 2.44E-01

Methylation in Case

9.53E-02 (Median) Methylation in Control 9.22E-02 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC30A1 in papillary thyroid cancer [ 7 ]

Location

TSS1500 (cg24598094)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.16E+00 Statistic Test p-value: 4.93E-02; Z-score: -6.37E-01

Methylation in Case

3.36E-01 (Median) Methylation in Control 3.90E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC30A1 in papillary thyroid cancer [ 7 ]

Location

Body (cg03763950)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 3.83E-02; Z-score: -2.24E-01

Methylation in Case

6.82E-02 (Median) Methylation in Control 7.05E-02 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Systemic lupus erythematosus

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC30A1 in systemic lupus erythematosus [ 8 ]

Location

TSS1500 (cg05152717)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 2.32E-02; Z-score: -4.67E-02

Methylation in Case

9.35E-02 (Median) Methylation in Control 9.45E-02 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Atypical teratoid rhabdoid tumor

           7 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC30A1 in atypical teratoid rhabdoid tumor [ 9 ]

Location

1stExon (cg19652869)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.60E+00 Statistic Test p-value: 1.64E-17; Z-score: -2.23E+00

Methylation in Case

4.51E-01 (Median) Methylation in Control 7.21E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC30A1 in atypical teratoid rhabdoid tumor [ 9 ]

Location

1stExon (cg24162367)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.73E+00 Statistic Test p-value: 1.24E-16; Z-score: -2.33E+00

Methylation in Case

3.34E-01 (Median) Methylation in Control 5.76E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC30A1 in atypical teratoid rhabdoid tumor [ 9 ]

Location

Body (cg01143423)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.09E+00 Statistic Test p-value: 4.77E-05; Z-score: 7.61E-01

Methylation in Case

9.14E-01 (Median) Methylation in Control 8.39E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC30A1 in atypical teratoid rhabdoid tumor [ 9 ]

Location

Body (cg03763950)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 4.28E-04; Z-score: 9.73E-01

Methylation in Case

8.81E-01 (Median) Methylation in Control 8.18E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC30A1 in atypical teratoid rhabdoid tumor [ 9 ]

Location

Body (cg04976746)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 1.09E-03; Z-score: -6.63E-01

Methylation in Case

7.33E-01 (Median) Methylation in Control 8.00E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC30A1 in atypical teratoid rhabdoid tumor [ 9 ]

Location

Body (cg08629942)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.10E+00 Statistic Test p-value: 7.68E-03; Z-score: -6.50E-01

Methylation in Case

6.59E-01 (Median) Methylation in Control 7.24E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC30A1 in atypical teratoid rhabdoid tumor [ 9 ]

Location

Body (cg12405231)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.29E+00 Statistic Test p-value: 2.73E-02; Z-score: -3.13E-01

Methylation in Case

1.69E-01 (Median) Methylation in Control 2.19E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Breast cancer

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC30A1 in breast cancer [ 10 ]

Location

Body (cg12405231)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 4.31E-02; Z-score: -4.51E-02

Methylation in Case

8.89E-01 (Median) Methylation in Control 8.90E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Pancretic ductal adenocarcinoma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC30A1 in pancretic ductal adenocarcinoma [ 11 ]

Location

Body (cg11273176)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 2.00E-02; Z-score: -4.60E-01

Methylation in Case

5.71E-01 (Median) Methylation in Control 6.05E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Panic disorder

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC30A1 in panic disorder [ 12 ]

Location

Body (cg08629942)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 9.21E-01 Statistic Test p-value: 9.56E-06; Z-score: 8.58E-01

Methylation in Case

-2.89E+00 (Median) Methylation in Control -3.14E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC30A1 in panic disorder [ 12 ]

Location

Body (cg12405231)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.74E+00 Statistic Test p-value: 1.55E-02; Z-score: -5.35E-01

Methylation in Case

1.34E-01 (Median) Methylation in Control 3.68E-01 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

microRNA

  Unclear Phenotype

         46 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

let-7b directly targets SLC30A1 [ 13 ]

Epigenetic Type

microRNA Experiment Method Proteomics

miRNA Stemloop ID

let-7b miRNA Mature ID let-7b-5p

miRNA Sequence

UGAGGUAGUAGGUUGUGUGGUU

miRNA Target Type

Direct

Experimental Material

Human cervical cancer cell line (Hela)

  Epigenetic Phenomenon 2

miR-106a directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-106a miRNA Mature ID miR-106a-5p

miRNA Sequence

AAAAGUGCUUACAGUGCAGGUAG

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 3

miR-106b directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-106b miRNA Mature ID miR-106b-5p

miRNA Sequence

UAAAGUGCUGACAGUGCAGAU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 4

miR-1277 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-1277 miRNA Mature ID miR-1277-5p

miRNA Sequence

AAAUAUAUAUAUAUAUGUACGUAU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 5

miR-155 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-155 miRNA Mature ID miR-155-5p

miRNA Sequence

UUAAUGCUAAUCGUGAUAGGGGUU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 6

miR-16 directly targets SLC30A1 [ 13 ]

Epigenetic Type

microRNA Experiment Method Proteomics

miRNA Stemloop ID

miR-16 miRNA Mature ID miR-16-5p

miRNA Sequence

UAGCAGCACGUAAAUAUUGGCG

miRNA Target Type

Direct

Experimental Material

Human cervical cancer cell line (Hela)

  Epigenetic Phenomenon 7

miR-17 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-17 miRNA Mature ID miR-17-5p

miRNA Sequence

CAAAGUGCUUACAGUGCAGGUAG

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 8

miR-186 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-186 miRNA Mature ID miR-186-5p

miRNA Sequence

CAAAGAAUUCUCCUUUUGGGCU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 9

miR-187 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-187 miRNA Mature ID miR-187-5p

miRNA Sequence

GGCUACAACACAGGACCCGGGC

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 10

miR-193b directly targets SLC30A1 [ 15 ]

Epigenetic Type

microRNA Experiment Method CLASH

miRNA Stemloop ID

miR-193b miRNA Mature ID miR-193b-3p

miRNA Sequence

AACUGGCCCUCAAAGUCCCGCU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 11

miR-20a directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-20a miRNA Mature ID miR-20a-5p

miRNA Sequence

UAAAGUGCUUAUAGUGCAGGUAG

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 12

miR-20b directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-20b miRNA Mature ID miR-20b-5p

miRNA Sequence

CAAAGUGCUCAUAGUGCAGGUAG

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 13

miR-3133 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-3133 miRNA Mature ID miR-3133

miRNA Sequence

UAAAGAACUCUUAAAACCCAAU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 14

miR-3191 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-3191 miRNA Mature ID miR-3191-5p

miRNA Sequence

CUCUCUGGCCGUCUACCUUCCA

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 15

miR-33a directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-33a miRNA Mature ID miR-33a-5p

miRNA Sequence

GUGCAUUGUAGUUGCAUUGCA

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 16

miR-33b directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-33b miRNA Mature ID miR-33b-5p

miRNA Sequence

GUGCAUUGCUGUUGCAUUGC

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 17

miR-3611 directly targets SLC30A1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-3611 miRNA Mature ID miR-3611

miRNA Sequence

UUGUGAAGAAAGAAAUUCUUA

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 18

miR-4501 directly targets SLC30A1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-4501 miRNA Mature ID miR-4501

miRNA Sequence

UAUGUGACCUCGGAUGAAUCA

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 19

miR-4506 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-4506 miRNA Mature ID miR-4506

miRNA Sequence

AAAUGGGUGGUCUGAGGCAA

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 20

miR-4524b directly targets SLC30A1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-4524b miRNA Mature ID miR-4524b-3p

miRNA Sequence

GAGACAGGUUCAUGCUGCUA

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 21

miR-496 directly targets SLC30A1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-496 miRNA Mature ID miR-496

miRNA Sequence

UGAGUAUUACAUGGCCAAUCUC

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 22

miR-497 directly targets SLC30A1 [ 17 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-497 miRNA Mature ID miR-497-3p

miRNA Sequence

CAAACCACACUGUGGUGUUAGA

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 23

miR-511 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-511 miRNA Mature ID miR-511-5p

miRNA Sequence

GUGUCUUUUGCUCUGCAGUCA

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 24

miR-519a directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-519a miRNA Mature ID miR-519a-3p

miRNA Sequence

AAAGUGCAUCCUUUUAGAGUGU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 25

miR-519b directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-519b miRNA Mature ID miR-519b-3p

miRNA Sequence

AAAGUGCAUCCUUUUAGAGGUU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 26

miR-519c directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-519c miRNA Mature ID miR-519c-3p

miRNA Sequence

AAAGUGCAUCUUUUUAGAGGAU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 27

miR-519d directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-519d miRNA Mature ID miR-519d-3p

miRNA Sequence

CAAAGUGCCUCCCUUUAGAGUG

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 28

miR-526b directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-526b miRNA Mature ID miR-526b-3p

miRNA Sequence

GAAAGUGCUUCCUUUUAGAGGC

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 29

miR-548aa directly targets SLC30A1 [ 17 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-548aa miRNA Mature ID miR-548aa

miRNA Sequence

AAAAACCACAAUUACUUUUGCACCA

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 30

miR-548ac directly targets SLC30A1 [ 17 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-548ac miRNA Mature ID miR-548ac

miRNA Sequence

CAAAAACCGGCAAUUACUUUUG

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 31

miR-548ap directly targets SLC30A1 [ 17 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-548ap miRNA Mature ID miR-548ap-3p

miRNA Sequence

AAAAACCACAAUUACUUUU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 32

miR-548bb directly targets SLC30A1 [ 17 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-548bb miRNA Mature ID miR-548bb-3p

miRNA Sequence

CAAAAACCAUAGUUACUUUUGC

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 33

miR-548d directly targets SLC30A1 [ 17 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-548d miRNA Mature ID miR-548d-3p

miRNA Sequence

CAAAAACCACAGUUUCUUUUGC

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 34

miR-548h directly targets SLC30A1 [ 17 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-548h miRNA Mature ID miR-548h-3p

miRNA Sequence

CAAAAACCGCAAUUACUUUUGCA

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 35

miR-548t directly targets SLC30A1 [ 17 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-548t miRNA Mature ID miR-548t-3p

miRNA Sequence

AAAAACCACAAUUACUUUUGCACCA

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 36

miR-548z directly targets SLC30A1 [ 17 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-548z miRNA Mature ID miR-548z

miRNA Sequence

CAAAAACCGCAAUUACUUUUGCA

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 37

miR-5571 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-5571 miRNA Mature ID miR-5571-5p

miRNA Sequence

CAAUUCUCAAAGGAGCCUCCC

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 38

miR-5692a directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-5692a miRNA Mature ID miR-5692a

miRNA Sequence

CAAAUAAUACCACAGUGGGUGU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 39

miR-615 directly targets SLC30A1 [ 15 ]

Epigenetic Type

microRNA Experiment Method CLASH

miRNA Stemloop ID

miR-615 miRNA Mature ID miR-615-3p

miRNA Sequence

UCCGAGCCUGGGUCUCCCUCUU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 40

miR-6728 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-6728 miRNA Mature ID miR-6728-3p

miRNA Sequence

UCUCUGCUCUGCUCUCCCCAG

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 41

miR-6744 directly targets SLC30A1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-6744 miRNA Mature ID miR-6744-5p

miRNA Sequence

UGGAUGACAGUGGAGGCCU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 42

miR-6776 directly targets SLC30A1 [ 17 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-6776 miRNA Mature ID miR-6776-3p

miRNA Sequence

CAACCACCACUGUCUCUCCCCAG

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 43

miR-6830 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-6830 miRNA Mature ID miR-6830-3p

miRNA Sequence

UGUCUUUCUUCUCUCCCUUGCAG

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 44

miR-7705 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-7705 miRNA Mature ID miR-7705

miRNA Sequence

AAUAGCUCAGAAUGUCAGUUCUG

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 45

miR-888 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-888 miRNA Mature ID miR-888-5p

miRNA Sequence

UACUCAAAAAGCUGUCAGUCA

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 46

miR-93 directly targets SLC30A1 [ 14 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-93 miRNA Mature ID miR-93-5p

miRNA Sequence

CAAAGUGCUGUUCGUGCAGGUAG

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)
References
1 Genome-scale analysis of DNA methylation in colorectal cancer using Infinium HumanMethylation450 BeadChips. Epigenetics. 2013 Sep;8(9):921-34.
2 DNA Methylation Dynamics in Urological Tumors.
3 A CpG-methylation-based assay to predict survival in clear cell renal cell carcinoma. Nat Commun. 2015 Oct 30;6:8699.
4 Differences in DNA methylation signatures reveal multiple pathways of progression from adenoma to colorectal cancer. Gastroenterology. 2014 Aug;147(2):418-29.e8.
5 Exploring genome-wide DNA methylation profiles altered in hepatocellular carcinoma using Infinium HumanMethylation 450 BeadChips. Epigenetics. 2013 Jan;8(1):34-43.
6 HIV-1 Infection Accelerates Age According to the Epigenetic Clock. J Infect Dis. 2015 Nov 15;212(10):1563-73.
7 Prognostic Classifier Based on Genome-Wide DNA Methylation Profiling in Well-Differentiated Thyroid Tumors. J Clin Endocrinol Metab. 2017 Nov 1;102(11):4089-4099.
8 Genome-wide DNA methylation analysis of systemic lupus erythematosus reveals persistent hypomethylation of interferon genes and compositional changes to CD4+ T-cell populations. PLoS Genet. 2013;9(8):e1003678.
9 Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes. Cancer Cell. 2016 Mar 14;29(3):379-393.
10 Genome-wide Scan for Methylation Profiles in Breast Cancer
11 Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling. Int J Cancer. 2014 Sep 1;135(5):1110-8.
12 DNA Methylation signatures in panic disorder. Transl Psychiatry. 2017 Dec 18;7(12):1287.
13 Widespread changes in protein synthesis induced by microRNAs. Nature. 2008 Sep 4;455(7209):58-63.
14 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins. Nat Methods. 2011 May 15;8(7):559-64.
15 Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding. Cell. 2013 Apr 25;153(3):654-65.
16 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP. Cell. 2010 Apr 2;141(1):129-41.
17 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates. Genes Dev. 2013 Jul 15;27(14):1624-32.

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