General Information of Drug Transporter (DT)
DT ID DTD0330 Transporter Info
Gene Name SLC38A3
Transporter Name Sodium-coupled neutral amino acid transporter 3
Gene ID
10991
UniProt ID
Q99624
Epigenetic Regulations of This DT (EGR)

Methylation

  Atypical teratoid rhabdoid tumor

         10 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg04682699)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 3.62E-08; Z-score: -1.25E+00

Methylation in Case

8.43E-01 (Median) Methylation in Control 8.93E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC38A3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg07212894)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.61E+00 Statistic Test p-value: 1.00E-07; Z-score: -1.08E+00

Methylation in Case

3.54E-01 (Median) Methylation in Control 5.69E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC38A3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg08170375)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.20E+00 Statistic Test p-value: 1.33E-07; Z-score: -1.47E+00

Methylation in Case

7.11E-01 (Median) Methylation in Control 8.52E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC38A3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg13907146)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.34E+00 Statistic Test p-value: 6.72E-07; Z-score: -1.47E+00

Methylation in Case

6.34E-01 (Median) Methylation in Control 8.51E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC38A3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg14019146)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.58E+00 Statistic Test p-value: 7.76E-07; Z-score: -1.69E+00

Methylation in Case

3.12E-01 (Median) Methylation in Control 4.93E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC38A3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg14957718)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.74E+00 Statistic Test p-value: 9.98E-07; Z-score: 7.40E-01

Methylation in Case

9.43E-02 (Median) Methylation in Control 5.43E-02 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC38A3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg19755318)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 3.50E-06; Z-score: -8.23E-01

Methylation in Case

8.83E-01 (Median) Methylation in Control 9.08E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC38A3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

5'UTR (cg26601922)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 1.21E-05; Z-score: -7.46E-01

Methylation in Case

6.48E-01 (Median) Methylation in Control 6.72E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC38A3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

Body (cg03645007)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.13E+00 Statistic Test p-value: 3.79E-04; Z-score: -8.41E-01

Methylation in Case

7.62E-01 (Median) Methylation in Control 8.62E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC38A3 in atypical teratoid rhabdoid tumor [ 1 ]

Location

3'UTR (cg19122460)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.25E+00 Statistic Test p-value: 2.66E-10; Z-score: -1.53E+00

Methylation in Case

6.09E-01 (Median) Methylation in Control 7.60E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Bladder cancer

           8 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in bladder cancer [ 2 ]

Location

5'UTR (cg13907146)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.45E+00 Statistic Test p-value: 5.99E-06; Z-score: -5.78E+00

Methylation in Case

2.24E-01 (Median) Methylation in Control 3.24E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC38A3 in bladder cancer [ 2 ]

Location

5'UTR (cg14019146)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.32E+00 Statistic Test p-value: 1.04E-04; Z-score: -3.82E+00

Methylation in Case

5.95E-01 (Median) Methylation in Control 7.84E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC38A3 in bladder cancer [ 2 ]

Location

5'UTR (cg04682699)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.07E+00 Statistic Test p-value: 3.27E-04; Z-score: -3.25E+00

Methylation in Case

7.46E-01 (Median) Methylation in Control 7.97E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC38A3 in bladder cancer [ 2 ]

Location

5'UTR (cg08170375)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 7.57E-04; Z-score: -7.18E+00

Methylation in Case

7.79E-01 (Median) Methylation in Control 8.27E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC38A3 in bladder cancer [ 2 ]

Location

5'UTR (cg14957718)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.42E+00 Statistic Test p-value: 4.96E-02; Z-score: -9.71E-01

Methylation in Case

1.04E-01 (Median) Methylation in Control 1.47E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC38A3 in bladder cancer [ 2 ]

Location

TSS1500 (cg00390253)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.80E+00 Statistic Test p-value: 3.29E-13; Z-score: -1.64E+01

Methylation in Case

4.20E-01 (Median) Methylation in Control 7.55E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC38A3 in bladder cancer [ 2 ]

Location

TSS1500 (cg15335139)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.44E+00 Statistic Test p-value: 1.95E-06; Z-score: -7.64E+00

Methylation in Case

4.18E-01 (Median) Methylation in Control 6.04E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC38A3 in bladder cancer [ 2 ]

Location

Body (cg03645007)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.48E+00 Statistic Test p-value: 5.06E-11; Z-score: -1.01E+01

Methylation in Case

2.65E-01 (Median) Methylation in Control 6.57E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Breast cancer

         10 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in breast cancer [ 3 ]

Location

5'UTR (cg13907146)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.42E+00 Statistic Test p-value: 4.15E-08; Z-score: -2.28E+00

Methylation in Case

3.52E-01 (Median) Methylation in Control 5.00E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC38A3 in breast cancer [ 3 ]

Location

5'UTR (cg19755318)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.72E+00 Statistic Test p-value: 2.20E-06; Z-score: -1.56E+00

Methylation in Case

1.66E-01 (Median) Methylation in Control 2.84E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC38A3 in breast cancer [ 3 ]

Location

5'UTR (cg08170375)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 9.48E-05; Z-score: -7.66E-01

Methylation in Case

8.18E-01 (Median) Methylation in Control 8.43E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC38A3 in breast cancer [ 3 ]

Location

5'UTR (cg14957718)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.29E+00 Statistic Test p-value: 1.54E-03; Z-score: -1.09E+00

Methylation in Case

7.32E-02 (Median) Methylation in Control 1.68E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC38A3 in breast cancer [ 3 ]

Location

5'UTR (cg26601922)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.36E+00 Statistic Test p-value: 1.03E-02; Z-score: -1.02E+00

Methylation in Case

1.08E-01 (Median) Methylation in Control 1.46E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC38A3 in breast cancer [ 3 ]

Location

5'UTR (cg04682699)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 1.32E-02; Z-score: -2.18E-01

Methylation in Case

7.45E-01 (Median) Methylation in Control 7.55E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC38A3 in breast cancer [ 3 ]

Location

TSS1500 (cg00390253)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 1.69E-09; Z-score: -1.79E+00

Methylation in Case

6.80E-01 (Median) Methylation in Control 7.82E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC38A3 in breast cancer [ 3 ]

Location

TSS200 (cg24363298)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.17E+00 Statistic Test p-value: 5.08E-06; Z-score: 1.01E+00

Methylation in Case

1.01E-01 (Median) Methylation in Control 8.58E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC38A3 in breast cancer [ 3 ]

Location

TSS200 (cg19914607)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.12E+00 Statistic Test p-value: 5.14E-03; Z-score: 7.26E-01

Methylation in Case

9.26E-02 (Median) Methylation in Control 8.30E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC38A3 in breast cancer [ 3 ]

Location

Body (cg03645007)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 1.63E-08; Z-score: -1.17E+00

Methylation in Case

7.37E-01 (Median) Methylation in Control 7.80E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Renal cell carcinoma

           7 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in clear cell renal cell carcinoma [ 4 ]

Location

5'UTR (cg19755318)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.69E+00 Statistic Test p-value: 1.17E-04; Z-score: 1.73E+00

Methylation in Case

1.02E-01 (Median) Methylation in Control 6.00E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC38A3 in clear cell renal cell carcinoma [ 4 ]

Location

5'UTR (cg07212894)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.16E+00 Statistic Test p-value: 1.94E-03; Z-score: 5.69E-01

Methylation in Case

2.04E-02 (Median) Methylation in Control 1.77E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC38A3 in clear cell renal cell carcinoma [ 4 ]

Location

5'UTR (cg14957718)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.35E+00 Statistic Test p-value: 4.09E-03; Z-score: 9.93E-01

Methylation in Case

3.30E-02 (Median) Methylation in Control 2.45E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC38A3 in clear cell renal cell carcinoma [ 4 ]

Location

5'UTR (cg26601922)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+00 Statistic Test p-value: 4.43E-02; Z-score: 7.43E-01

Methylation in Case

9.93E-02 (Median) Methylation in Control 8.39E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC38A3 in clear cell renal cell carcinoma [ 4 ]

Location

TSS1500 (cg00390253)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.17E+00 Statistic Test p-value: 1.10E-13; Z-score: -5.73E+00

Methylation in Case

8.03E-01 (Median) Methylation in Control 9.37E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC38A3 in clear cell renal cell carcinoma [ 4 ]

Location

TSS1500 (cg15335139)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 4.27E-04; Z-score: -9.00E-01

Methylation in Case

8.22E-01 (Median) Methylation in Control 8.56E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC38A3 in clear cell renal cell carcinoma [ 4 ]

Location

TSS200 (cg24363298)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.21E+00 Statistic Test p-value: 1.05E-03; Z-score: 8.84E-01

Methylation in Case

8.36E-02 (Median) Methylation in Control 6.88E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Colorectal cancer

         13 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in colorectal cancer [ 5 ]

Location

5'UTR (cg14019146)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.14E+00 Statistic Test p-value: 1.36E-10; Z-score: -3.40E+00

Methylation in Case

7.83E-01 (Median) Methylation in Control 8.89E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC38A3 in colorectal cancer [ 5 ]

Location

5'UTR (cg19755318)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.04E+00 Statistic Test p-value: 1.82E-10; Z-score: 5.35E+00

Methylation in Case

3.25E-01 (Median) Methylation in Control 1.59E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC38A3 in colorectal cancer [ 5 ]

Location

5'UTR (cg26601922)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+00 Statistic Test p-value: 1.07E-06; Z-score: 1.79E+00

Methylation in Case

1.94E-01 (Median) Methylation in Control 1.65E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC38A3 in colorectal cancer [ 5 ]

Location

5'UTR (cg14957718)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.56E+00 Statistic Test p-value: 1.08E-06; Z-score: 1.84E+00

Methylation in Case

5.36E-02 (Median) Methylation in Control 3.43E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC38A3 in colorectal cancer [ 5 ]

Location

5'UTR (cg07212894)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.17E+00 Statistic Test p-value: 1.79E-05; Z-score: 6.52E-01

Methylation in Case

8.55E-02 (Median) Methylation in Control 7.30E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC38A3 in colorectal cancer [ 5 ]

Location

5'UTR (cg13907146)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.26E+00 Statistic Test p-value: 1.38E-04; Z-score: 1.08E+00

Methylation in Case

5.01E-01 (Median) Methylation in Control 3.99E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC38A3 in colorectal cancer [ 5 ]

Location

5'UTR (cg08170375)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 1.42E-02; Z-score: -4.59E-01

Methylation in Case

9.17E-01 (Median) Methylation in Control 9.24E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC38A3 in colorectal cancer [ 5 ]

Location

TSS1500 (cg00390253)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 3.27E-08; Z-score: -3.23E+00

Methylation in Case

7.74E-01 (Median) Methylation in Control 8.43E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC38A3 in colorectal cancer [ 5 ]

Location

TSS200 (cg24363298)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.55E+00 Statistic Test p-value: 3.07E-07; Z-score: 3.46E+00

Methylation in Case

7.62E-02 (Median) Methylation in Control 4.91E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC38A3 in colorectal cancer [ 5 ]

Location

TSS200 (cg19914607)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.14E+00 Statistic Test p-value: 1.08E-05; Z-score: 1.06E+00

Methylation in Case

1.71E-01 (Median) Methylation in Control 1.50E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of SLC38A3 in colorectal cancer [ 5 ]

Location

Body (cg03645007)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 5.70E-05; Z-score: -1.06E+00

Methylation in Case

8.52E-01 (Median) Methylation in Control 8.73E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of SLC38A3 in colorectal cancer [ 5 ]

Location

3'UTR (cg19122460)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 2.40E-03; Z-score: -3.06E-01

Methylation in Case

8.99E-01 (Median) Methylation in Control 9.05E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Hepatocellular carcinoma

         12 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg19755318)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.34E+00 Statistic Test p-value: 4.92E-08; Z-score: -1.07E+00

Methylation in Case

8.47E-02 (Median) Methylation in Control 1.14E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC38A3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg04682699)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.27E+00 Statistic Test p-value: 2.49E-05; Z-score: -1.27E+00

Methylation in Case

3.81E-01 (Median) Methylation in Control 4.85E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC38A3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg13907146)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.29E+00 Statistic Test p-value: 1.04E-04; Z-score: -9.87E-01

Methylation in Case

2.72E-01 (Median) Methylation in Control 3.50E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC38A3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg08170375)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 1.14E-03; Z-score: -6.50E-01

Methylation in Case

7.41E-01 (Median) Methylation in Control 7.67E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC38A3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg14019146)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.30E+00 Statistic Test p-value: 1.46E-03; Z-score: -9.81E-01

Methylation in Case

3.63E-01 (Median) Methylation in Control 4.73E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC38A3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg14957718)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.32E+00 Statistic Test p-value: 1.62E-03; Z-score: -5.77E-01

Methylation in Case

3.97E-02 (Median) Methylation in Control 5.24E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC38A3 in hepatocellular carcinoma [ 6 ]

Location

5'UTR (cg26601922)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 4.74E-02; Z-score: -3.92E-01

Methylation in Case

8.24E-02 (Median) Methylation in Control 8.74E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC38A3 in hepatocellular carcinoma [ 6 ]

Location

TSS1500 (cg26164767)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.20E+00 Statistic Test p-value: 1.01E-10; Z-score: -2.42E+00

Methylation in Case

5.46E-01 (Median) Methylation in Control 6.54E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC38A3 in hepatocellular carcinoma [ 6 ]

Location

TSS1500 (cg05101920)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.11E+00 Statistic Test p-value: 1.40E-10; Z-score: 4.26E+00

Methylation in Case

3.56E-01 (Median) Methylation in Control 1.69E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC38A3 in hepatocellular carcinoma [ 6 ]

Location

1stExon (cg20471076)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.82E+00 Statistic Test p-value: 5.10E-22; Z-score: -1.10E+01

Methylation in Case

4.45E-01 (Median) Methylation in Control 8.09E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of SLC38A3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg22872778)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.57E+00 Statistic Test p-value: 7.13E-18; Z-score: -9.89E+00

Methylation in Case

6.05E-01 (Median) Methylation in Control 9.50E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of SLC38A3 in hepatocellular carcinoma [ 6 ]

Location

Body (cg03645007)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 7.76E-04; Z-score: 7.97E-01

Methylation in Case

7.80E-01 (Median) Methylation in Control 7.49E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  HIV infection

           7 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in HIV infection [ 7 ]

Location

5'UTR (cg13907146)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.27E+00 Statistic Test p-value: 4.26E-05; Z-score: 1.79E+00

Methylation in Case

1.89E-01 (Median) Methylation in Control 1.48E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC38A3 in HIV infection [ 7 ]

Location

5'UTR (cg19755318)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.28E+00 Statistic Test p-value: 9.70E-05; Z-score: 1.20E+00

Methylation in Case

1.05E-01 (Median) Methylation in Control 8.23E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC38A3 in HIV infection [ 7 ]

Location

5'UTR (cg14957718)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.75E+00 Statistic Test p-value: 3.84E-04; Z-score: 1.76E+00

Methylation in Case

5.41E-02 (Median) Methylation in Control 3.10E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC38A3 in HIV infection [ 7 ]

Location

TSS1500 (cg00390253)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.10E+00 Statistic Test p-value: 1.02E-03; Z-score: -1.85E+00

Methylation in Case

7.19E-01 (Median) Methylation in Control 7.94E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC38A3 in HIV infection [ 7 ]

Location

TSS200 (cg24363298)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.14E+00 Statistic Test p-value: 7.67E-04; Z-score: 7.81E-01

Methylation in Case

1.13E-01 (Median) Methylation in Control 9.96E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC38A3 in HIV infection [ 7 ]

Location

TSS200 (cg19914607)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.24E+00 Statistic Test p-value: 1.76E-03; Z-score: 1.17E+00

Methylation in Case

1.07E-01 (Median) Methylation in Control 8.59E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC38A3 in HIV infection [ 7 ]

Location

Body (cg03645007)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 3.54E-05; Z-score: -1.11E+00

Methylation in Case

7.55E-01 (Median) Methylation in Control 7.90E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Lung adenocarcinoma

           4 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in lung adenocarcinoma [ 8 ]

Location

5'UTR (cg07212894)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.19E+00 Statistic Test p-value: 3.74E-02; Z-score: 1.37E+00

Methylation in Case

9.54E-02 (Median) Methylation in Control 8.01E-02 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC38A3 in lung adenocarcinoma [ 8 ]

Location

5'UTR (cg08170375)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 3.82E-02; Z-score: -1.55E+00

Methylation in Case

8.52E-01 (Median) Methylation in Control 8.70E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC38A3 in lung adenocarcinoma [ 8 ]

Location

TSS1500 (cg00390253)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.11E+00 Statistic Test p-value: 1.77E-03; Z-score: -2.97E+00

Methylation in Case

6.98E-01 (Median) Methylation in Control 7.76E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC38A3 in lung adenocarcinoma [ 8 ]

Location

Body (cg03645007)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 4.58E-03; Z-score: -2.06E+00

Methylation in Case

7.63E-01 (Median) Methylation in Control 8.07E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Panic disorder

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in panic disorder [ 9 ]

Location

5'UTR (cg08170375)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.07E+00 Statistic Test p-value: 4.15E-02; Z-score: -4.11E-01

Methylation in Case

2.13E+00 (Median) Methylation in Control 2.29E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Papillary thyroid cancer

           6 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in papillary thyroid cancer [ 10 ]

Location

5'UTR (cg19755318)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.14E+00 Statistic Test p-value: 5.58E-04; Z-score: 7.57E-01

Methylation in Case

1.02E-01 (Median) Methylation in Control 8.98E-02 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC38A3 in papillary thyroid cancer [ 10 ]

Location

5'UTR (cg13907146)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 6.33E-03; Z-score: 2.38E-01

Methylation in Case

3.12E-01 (Median) Methylation in Control 3.02E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC38A3 in papillary thyroid cancer [ 10 ]

Location

5'UTR (cg08170375)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 8.09E-03; Z-score: -4.05E-01

Methylation in Case

9.20E-01 (Median) Methylation in Control 9.26E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC38A3 in papillary thyroid cancer [ 10 ]

Location

5'UTR (cg04682699)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 4.97E-02; Z-score: -5.42E-01

Methylation in Case

8.60E-01 (Median) Methylation in Control 8.73E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC38A3 in papillary thyroid cancer [ 10 ]

Location

TSS1500 (cg00390253)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.08E+00 Statistic Test p-value: 5.67E-10; Z-score: -1.88E+00

Methylation in Case

8.16E-01 (Median) Methylation in Control 8.81E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC38A3 in papillary thyroid cancer [ 10 ]

Location

Body (cg03645007)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 1.86E-07; Z-score: -1.58E+00

Methylation in Case

8.46E-01 (Median) Methylation in Control 8.83E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Prostate cancer

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in prostate cancer [ 11 ]

Location

5'UTR (cg22146252)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.54E+00 Statistic Test p-value: 1.25E-03; Z-score: 5.84E+00

Methylation in Case

6.97E-01 (Median) Methylation in Control 4.52E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC38A3 in prostate cancer [ 11 ]

Location

5'UTR (cg19504179)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.15E+00 Statistic Test p-value: 4.85E-02; Z-score: 1.55E+00

Methylation in Case

9.40E-01 (Median) Methylation in Control 8.14E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC38A3 in prostate cancer [ 11 ]

Location

Body (cg21292473)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.38E+00 Statistic Test p-value: 3.15E-02; Z-score: -6.25E+00

Methylation in Case

6.01E-01 (Median) Methylation in Control 8.27E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC38A3 in prostate cancer [ 11 ]

Location

Body (cg01347702)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.35E+00 Statistic Test p-value: 4.23E-02; Z-score: -2.42E+00

Methylation in Case

3.94E-01 (Median) Methylation in Control 5.32E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Colon cancer

           6 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in colon adenocarcinoma [ 12 ]

Location

TSS1500 (cg00911376)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.22E+00 Statistic Test p-value: 3.51E-05; Z-score: -2.69E+00

Methylation in Case

6.19E-01 (Median) Methylation in Control 7.52E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC38A3 in colon adenocarcinoma [ 12 ]

Location

TSS1500 (cg13107973)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.25E+00 Statistic Test p-value: 3.33E-04; Z-score: -1.78E+00

Methylation in Case

4.74E-01 (Median) Methylation in Control 5.93E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC38A3 in colon adenocarcinoma [ 12 ]

Location

TSS1500 (cg06823681)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.16E+00 Statistic Test p-value: 6.59E-04; Z-score: -2.25E+00

Methylation in Case

6.34E-01 (Median) Methylation in Control 7.34E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC38A3 in colon adenocarcinoma [ 12 ]

Location

Body (cg25477497)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.93E+00 Statistic Test p-value: 2.95E-09; Z-score: -5.06E+00

Methylation in Case

3.09E-01 (Median) Methylation in Control 5.97E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC38A3 in colon adenocarcinoma [ 12 ]

Location

Body (cg10467711)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.15E+00 Statistic Test p-value: 1.01E-04; Z-score: 6.15E+00

Methylation in Case

4.33E-01 (Median) Methylation in Control 2.01E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC38A3 in colon adenocarcinoma [ 12 ]

Location

Body (cg20392616)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.11E+00 Statistic Test p-value: 1.99E-04; Z-score: -2.90E+00

Methylation in Case

7.66E-01 (Median) Methylation in Control 8.47E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Pancretic ductal adenocarcinoma

           7 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC38A3 in pancretic ductal adenocarcinoma [ 13 ]

Location

TSS1500 (cg11784785)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.59E+00 Statistic Test p-value: 2.96E-10; Z-score: 1.64E+00

Methylation in Case

2.44E-01 (Median) Methylation in Control 1.54E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC38A3 in pancretic ductal adenocarcinoma [ 13 ]

Location

TSS200 (cg16567290)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 9.20E-04; Z-score: 1.04E+00

Methylation in Case

4.71E-01 (Median) Methylation in Control 4.51E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC38A3 in pancretic ductal adenocarcinoma [ 13 ]

Location

TSS200 (cg16713727)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.14E+00 Statistic Test p-value: 3.07E-03; Z-score: 6.53E-01

Methylation in Case

6.40E-01 (Median) Methylation in Control 5.60E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC38A3 in pancretic ductal adenocarcinoma [ 13 ]

Location

Body (cg20498033)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 4.26E-12; Z-score: -1.63E+00

Methylation in Case

8.28E-01 (Median) Methylation in Control 8.72E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC38A3 in pancretic ductal adenocarcinoma [ 13 ]

Location

Body (cg00050375)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.20E+00 Statistic Test p-value: 6.76E-07; Z-score: -1.25E+00

Methylation in Case

5.55E-01 (Median) Methylation in Control 6.66E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC38A3 in pancretic ductal adenocarcinoma [ 13 ]

Location

Body (cg13954127)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+00 Statistic Test p-value: 1.17E-04; Z-score: 1.05E+00

Methylation in Case

7.09E-01 (Median) Methylation in Control 6.03E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC38A3 in pancretic ductal adenocarcinoma [ 13 ]

Location

Body (cg19846387)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.19E+00 Statistic Test p-value: 2.11E-03; Z-score: -1.03E+00

Methylation in Case

3.09E-01 (Median) Methylation in Control 3.68E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Lymphoma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Significant hypermethylation of SLC38A3 in lymphoma than that in healthy individual

Studied Phenotype

Lymphoma [ICD-11:2B30]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 1.10E-32; Fold-change: 0.582958477; Z-score: 34.1416127
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples
References
1 Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes. Cancer Cell. 2016 Mar 14;29(3):379-393.
2 DNA Methylation Dynamics in Urological Tumors.
3 Genome-wide Scan for Methylation Profiles in Breast Cancer
4 A CpG-methylation-based assay to predict survival in clear cell renal cell carcinoma. Nat Commun. 2015 Oct 30;6:8699.
5 Differences in DNA methylation signatures reveal multiple pathways of progression from adenoma to colorectal cancer. Gastroenterology. 2014 Aug;147(2):418-29.e8.
6 Exploring genome-wide DNA methylation profiles altered in hepatocellular carcinoma using Infinium HumanMethylation 450 BeadChips. Epigenetics. 2013 Jan;8(1):34-43.
7 HIV-1 Infection Accelerates Age According to the Epigenetic Clock. J Infect Dis. 2015 Nov 15;212(10):1563-73.
8 DNA methylation analysis of lung adenocarcinoma and adjacent non-tumor tissues
9 DNA Methylation signatures in panic disorder. Transl Psychiatry. 2017 Dec 18;7(12):1287.
10 Prognostic Classifier Based on Genome-Wide DNA Methylation Profiling in Well-Differentiated Thyroid Tumors. J Clin Endocrinol Metab. 2017 Nov 1;102(11):4089-4099.
11 Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array. BMC Genomics. 2014 Jan 22;15:51.
12 Genome-scale analysis of DNA methylation in colorectal cancer using Infinium HumanMethylation450 BeadChips. Epigenetics. 2013 Sep;8(9):921-34.
13 Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling. Int J Cancer. 2014 Sep 1;135(5):1110-8.

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