General Information of Drug Transporter (DT)
DT ID DTD0353 Transporter Info
Gene Name SLC40A1
Transporter Name Iron-regulated transporter 1
Gene ID
30061
UniProt ID
Q9NP59
Epigenetic Regulations of This DT (EGR)

Methylation

  Prostate cancer

           4 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in prostate cancer [ 1 ]

Location

5'UTR (cg16427983)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.09E+00 Statistic Test p-value: 1.47E-03; Z-score: 4.08E+00

Methylation in Case

9.08E-01 (Median) Methylation in Control 8.31E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in prostate cancer [ 1 ]

Location

TSS1500 (cg21515032)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.05E+00 Statistic Test p-value: 8.75E-03; Z-score: 2.78E+00

Methylation in Case

9.08E-01 (Median) Methylation in Control 8.65E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC40A1 in prostate cancer [ 1 ]

Location

TSS1500 (cg09168997)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.15E+00 Statistic Test p-value: 1.97E-02; Z-score: 1.86E+00

Methylation in Case

7.70E-01 (Median) Methylation in Control 6.72E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Bladder cancer

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in bladder cancer [ 2 ]

Location

TSS1500 (cg04361126)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.75E+00 Statistic Test p-value: 9.97E-09; Z-score: -9.02E+00

Methylation in Case

2.19E-01 (Median) Methylation in Control 6.03E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in bladder cancer [ 2 ]

Location

TSS1500 (cg14499385)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.71E+00 Statistic Test p-value: 6.04E-06; Z-score: -5.34E+00

Methylation in Case

1.66E-01 (Median) Methylation in Control 2.84E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC40A1 in bladder cancer [ 2 ]

Location

TSS1500 (cg14126583)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.30E+00 Statistic Test p-value: 1.01E-02; Z-score: -1.37E+00

Methylation in Case

6.34E-02 (Median) Methylation in Control 8.24E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC40A1 in bladder cancer [ 2 ]

Location

TSS1500 (cg21660960)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.19E+00 Statistic Test p-value: 1.95E-02; Z-score: 1.19E+00

Methylation in Case

3.57E-02 (Median) Methylation in Control 3.01E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC40A1 in bladder cancer [ 2 ]

Location

Body (cg15599483)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 5.36E-07; Z-score: 5.91E+00

Methylation in Case

8.86E-01 (Median) Methylation in Control 8.30E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Breast cancer

           4 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in breast cancer [ 3 ]

Location

TSS1500 (cg04361126)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.47E+00 Statistic Test p-value: 4.75E-15; Z-score: -2.60E+00

Methylation in Case

4.32E-01 (Median) Methylation in Control 6.35E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in breast cancer [ 3 ]

Location

TSS1500 (cg14499385)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.19E+00 Statistic Test p-value: 2.72E-11; Z-score: -1.47E+00

Methylation in Case

2.81E-01 (Median) Methylation in Control 3.34E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC40A1 in breast cancer [ 3 ]

Location

TSS1500 (cg11483915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+00 Statistic Test p-value: 5.62E-04; Z-score: 7.15E-01

Methylation in Case

8.80E-02 (Median) Methylation in Control 7.46E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC40A1 in breast cancer [ 3 ]

Location

TSS1500 (cg21660960)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.19E+00 Statistic Test p-value: 7.35E-03; Z-score: 3.76E-01

Methylation in Case

5.83E-02 (Median) Methylation in Control 4.91E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Renal cell carcinoma

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in clear cell renal cell carcinoma [ 4 ]

Location

TSS1500 (cg14126583)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.36E+00 Statistic Test p-value: 1.11E-04; Z-score: -1.08E+00

Methylation in Case

3.54E-02 (Median) Methylation in Control 4.81E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in clear cell renal cell carcinoma [ 4 ]

Location

TSS1500 (cg14499385)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.12E+00 Statistic Test p-value: 3.67E-03; Z-score: 1.72E+00

Methylation in Case

4.39E-01 (Median) Methylation in Control 3.91E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC40A1 in clear cell renal cell carcinoma [ 4 ]

Location

TSS1500 (cg11483915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.33E+00 Statistic Test p-value: 3.84E-03; Z-score: 6.25E-01

Methylation in Case

3.21E-02 (Median) Methylation in Control 2.41E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC40A1 in clear cell renal cell carcinoma [ 4 ]

Location

TSS1500 (cg21660960)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.02E+00 Statistic Test p-value: 3.19E-02; Z-score: 1.19E-01

Methylation in Case

3.47E-02 (Median) Methylation in Control 3.41E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC40A1 in clear cell renal cell carcinoma [ 4 ]

Location

TSS1500 (cg09606941)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.23E+00 Statistic Test p-value: 4.76E-02; Z-score: 1.40E-01

Methylation in Case

1.47E-02 (Median) Methylation in Control 1.19E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Colon cancer

           4 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in colon adenocarcinoma [ 5 ]

Location

TSS1500 (cg24634422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.29E+00 Statistic Test p-value: 5.98E-04; Z-score: 5.31E+00

Methylation in Case

1.85E-01 (Median) Methylation in Control 8.05E-02 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in colon adenocarcinoma [ 5 ]

Location

TSS1500 (cg15577178)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.44E+00 Statistic Test p-value: 6.20E-04; Z-score: 5.21E+00

Methylation in Case

2.99E-01 (Median) Methylation in Control 1.23E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC40A1 in colon adenocarcinoma [ 5 ]

Location

Body (cg17065011)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.13E+00 Statistic Test p-value: 3.32E-05; Z-score: -3.37E+00

Methylation in Case

5.06E-01 (Median) Methylation in Control 5.74E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC40A1 in colon adenocarcinoma [ 5 ]

Location

Body (cg26877715)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.80E+00 Statistic Test p-value: 4.57E-03; Z-score: 1.96E+00

Methylation in Case

1.18E-01 (Median) Methylation in Control 6.56E-02 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Colorectal cancer

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in colorectal cancer [ 6 ]

Location

TSS1500 (cg04361126)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.41E+00 Statistic Test p-value: 2.80E-08; Z-score: -2.06E+00

Methylation in Case

4.85E-01 (Median) Methylation in Control 6.85E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in colorectal cancer [ 6 ]

Location

TSS1500 (cg14499385)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 1.66E-02; Z-score: -8.09E-01

Methylation in Case

3.37E-01 (Median) Methylation in Control 3.86E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Hepatocellular carcinoma

           9 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in hepatocellular carcinoma [ 7 ]

Location

TSS1500 (cg04625905)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.52E+00 Statistic Test p-value: 3.10E-16; Z-score: -3.13E+00

Methylation in Case

4.75E-01 (Median) Methylation in Control 7.21E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in hepatocellular carcinoma [ 7 ]

Location

TSS1500 (cg09606941)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.52E+00 Statistic Test p-value: 8.27E-04; Z-score: -6.22E-01

Methylation in Case

1.86E-02 (Median) Methylation in Control 2.82E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC40A1 in hepatocellular carcinoma [ 7 ]

Location

TSS1500 (cg11483915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.19E+00 Statistic Test p-value: 3.98E-03; Z-score: -6.22E-01

Methylation in Case

6.85E-02 (Median) Methylation in Control 8.13E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC40A1 in hepatocellular carcinoma [ 7 ]

Location

TSS1500 (cg14126583)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.08E+00 Statistic Test p-value: 2.18E-02; Z-score: -4.10E-01

Methylation in Case

8.13E-02 (Median) Methylation in Control 8.77E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC40A1 in hepatocellular carcinoma [ 7 ]

Location

TSS200 (cg13394305)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.23E+00 Statistic Test p-value: 2.45E-02; Z-score: -2.65E-01

Methylation in Case

2.01E-02 (Median) Methylation in Control 2.47E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC40A1 in hepatocellular carcinoma [ 7 ]

Location

Body (cg12142062)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.65E+00 Statistic Test p-value: 3.97E-21; Z-score: -8.54E+00

Methylation in Case

4.01E-01 (Median) Methylation in Control 6.64E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC40A1 in hepatocellular carcinoma [ 7 ]

Location

Body (cg22077670)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.56E+00 Statistic Test p-value: 1.51E-14; Z-score: -2.61E+00

Methylation in Case

4.29E-01 (Median) Methylation in Control 6.70E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC40A1 in hepatocellular carcinoma [ 7 ]

Location

Body (cg08792812)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.62E+00 Statistic Test p-value: 1.90E-13; Z-score: -2.16E+00

Methylation in Case

3.08E-01 (Median) Methylation in Control 4.98E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC40A1 in hepatocellular carcinoma [ 7 ]

Location

3'UTR (cg16758084)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.37E+00 Statistic Test p-value: 6.29E-15; Z-score: -7.00E+00

Methylation in Case

6.30E-01 (Median) Methylation in Control 8.60E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  HIV infection

           7 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in HIV infection [ 8 ]

Location

TSS1500 (cg09606941)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.55E+00 Statistic Test p-value: 3.97E-05; Z-score: 2.43E+00

Methylation in Case

4.91E-02 (Median) Methylation in Control 1.92E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in HIV infection [ 8 ]

Location

TSS1500 (cg11483915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.40E+00 Statistic Test p-value: 4.96E-04; Z-score: 1.50E+00

Methylation in Case

9.38E-02 (Median) Methylation in Control 6.68E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC40A1 in HIV infection [ 8 ]

Location

TSS1500 (cg04361126)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.17E+00 Statistic Test p-value: 1.91E-03; Z-score: 1.16E+00

Methylation in Case

3.21E-01 (Median) Methylation in Control 2.74E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC40A1 in HIV infection [ 8 ]

Location

TSS1500 (cg21660960)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.76E+00 Statistic Test p-value: 5.82E-03; Z-score: 1.00E+00

Methylation in Case

2.74E-02 (Median) Methylation in Control 1.56E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC40A1 in HIV infection [ 8 ]

Location

TSS1500 (cg14499385)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.12E+00 Statistic Test p-value: 8.29E-03; Z-score: 8.62E-01

Methylation in Case

3.05E-01 (Median) Methylation in Control 2.73E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC40A1 in HIV infection [ 8 ]

Location

TSS200 (cg15893070)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.27E+00 Statistic Test p-value: 1.65E-02; Z-score: 5.50E-01

Methylation in Case

2.30E-02 (Median) Methylation in Control 1.82E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC40A1 in HIV infection [ 8 ]

Location

Body (cg15599483)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.09E+00 Statistic Test p-value: 1.83E-18; Z-score: 1.92E+00

Methylation in Case

9.08E-01 (Median) Methylation in Control 8.33E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Lung adenocarcinoma

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in lung adenocarcinoma [ 9 ]

Location

TSS1500 (cg11483915)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.75E+00 Statistic Test p-value: 7.29E-03; Z-score: 5.86E+00

Methylation in Case

1.70E-01 (Median) Methylation in Control 9.73E-02 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in lung adenocarcinoma [ 9 ]

Location

TSS1500 (cg21660960)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.45E+00 Statistic Test p-value: 1.09E-02; Z-score: 1.86E+00

Methylation in Case

6.21E-02 (Median) Methylation in Control 4.30E-02 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC40A1 in lung adenocarcinoma [ 9 ]

Location

TSS1500 (cg09606941)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.46E+00 Statistic Test p-value: 1.72E-02; Z-score: 3.31E+00

Methylation in Case

1.17E-01 (Median) Methylation in Control 4.75E-02 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC40A1 in lung adenocarcinoma [ 9 ]

Location

TSS200 (cg15893070)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.37E+00 Statistic Test p-value: 1.92E-03; Z-score: 2.21E+00

Methylation in Case

7.10E-02 (Median) Methylation in Control 5.19E-02 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC40A1 in lung adenocarcinoma [ 9 ]

Location

TSS200 (cg13394305)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 3.35E+00 Statistic Test p-value: 1.24E-02; Z-score: 1.13E+01

Methylation in Case

1.10E-01 (Median) Methylation in Control 3.27E-02 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Panic disorder

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in panic disorder [ 10 ]

Location

TSS1500 (cg21660960)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -9.85E-01 Statistic Test p-value: 1.57E-02; Z-score: -3.35E-01

Methylation in Case

-4.61E+00 (Median) Methylation in Control -4.55E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in panic disorder [ 10 ]

Location

TSS1500 (cg09606941)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -9.84E-01 Statistic Test p-value: 2.34E-02; Z-score: -1.17E-01

Methylation in Case

-6.39E+00 (Median) Methylation in Control -6.29E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC40A1 in panic disorder [ 10 ]

Location

1stExon (cg10752008)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -9.50E-01 Statistic Test p-value: 3.41E-02; Z-score: -4.40E-01

Methylation in Case

-3.47E+00 (Median) Methylation in Control -3.30E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Papillary thyroid cancer

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in papillary thyroid cancer [ 11 ]

Location

TSS1500 (cg14499385)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+00 Statistic Test p-value: 5.08E-06; Z-score: 1.38E+00

Methylation in Case

3.56E-01 (Median) Methylation in Control 3.02E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in papillary thyroid cancer [ 11 ]

Location

TSS1500 (cg04361126)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.10E+00 Statistic Test p-value: 5.82E-04; Z-score: 1.08E+00

Methylation in Case

7.15E-01 (Median) Methylation in Control 6.49E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC40A1 in papillary thyroid cancer [ 11 ]

Location

TSS1500 (cg21660960)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 2.37E-02; Z-score: 5.53E-01

Methylation in Case

9.23E-02 (Median) Methylation in Control 8.61E-02 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC40A1 in papillary thyroid cancer [ 11 ]

Location

TSS1500 (cg14126583)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 4.15E-02; Z-score: -1.03E-01

Methylation in Case

1.12E-01 (Median) Methylation in Control 1.14E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC40A1 in papillary thyroid cancer [ 11 ]

Location

1stExon (cg10752008)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 3.83E-02; Z-score: 4.61E-01

Methylation in Case

8.99E-02 (Median) Methylation in Control 8.43E-02 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Systemic lupus erythematosus

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in systemic lupus erythematosus [ 12 ]

Location

TSS1500 (cg14126583)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 1.06E-02; Z-score: -4.56E-02

Methylation in Case

1.01E-01 (Median) Methylation in Control 1.03E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in systemic lupus erythematosus [ 12 ]

Location

TSS200 (cg13394305)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 9.91E-03; Z-score: -2.33E-02

Methylation in Case

1.34E-02 (Median) Methylation in Control 1.41E-02 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Atypical teratoid rhabdoid tumor

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in atypical teratoid rhabdoid tumor [ 13 ]

Location

1stExon (cg10752008)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.73E+00 Statistic Test p-value: 2.01E-19; Z-score: 2.98E+00

Methylation in Case

6.22E-01 (Median) Methylation in Control 3.60E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in atypical teratoid rhabdoid tumor [ 13 ]

Location

Body (cg01158447)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.20E+00 Statistic Test p-value: 4.87E-05; Z-score: -6.24E-01

Methylation in Case

3.70E-01 (Median) Methylation in Control 4.46E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Depression

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in depression [ 14 ]

Location

Body (cg15599483)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 4.60E-02; Z-score: -5.41E-01

Methylation in Case

6.73E-01 (Median) Methylation in Control 6.96E-01 (Median)

Studied Phenotype

Depression [ ICD-11: 6A8Z]

Experimental Material

Patient tissue samples

  Pancretic ductal adenocarcinoma

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC40A1 in pancretic ductal adenocarcinoma [ 15 ]

Location

Body (cg18781372)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 1.95E-05; Z-score: -2.89E-01

Methylation in Case

8.45E-01 (Median) Methylation in Control 8.54E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC40A1 in pancretic ductal adenocarcinoma [ 15 ]

Location

Body (cg19717347)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 1.37E-03; Z-score: -6.39E-01

Methylation in Case

8.49E-01 (Median) Methylation in Control 8.79E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Oligodendroglial tumour

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Moderate hypermethylation of SLC40A1 in oligodendroglial tumour than that in healthy individual

Studied Phenotype

Oligodendroglial tumour [ICD-11:2A00.Y1]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 2.27E-09; Fold-change: 0.264081071; Z-score: 18.60272558
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples

  Lymphoma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Significant hypermethylation of SLC40A1 in lymphoma than that in healthy individual

Studied Phenotype

Lymphoma [ICD-11:2B30]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 2.82E-15; Fold-change: 0.46271086; Z-score: 5.947384832
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples

  Oligodendroglioma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Significant hypermethylation of SLC40A1 in oligodendroglioma than that in healthy individual

Studied Phenotype

Oligodendroglioma [ICD-11:2A00.0Y]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 6.32E-41; Fold-change: 0.55188235; Z-score: 3.644433598
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples
References
1 Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array. BMC Genomics. 2014 Jan 22;15:51.
2 DNA Methylation Dynamics in Urological Tumors.
3 Genome-wide Scan for Methylation Profiles in Breast Cancer
4 A CpG-methylation-based assay to predict survival in clear cell renal cell carcinoma. Nat Commun. 2015 Oct 30;6:8699.
5 Genome-scale analysis of DNA methylation in colorectal cancer using Infinium HumanMethylation450 BeadChips. Epigenetics. 2013 Sep;8(9):921-34.
6 Differences in DNA methylation signatures reveal multiple pathways of progression from adenoma to colorectal cancer. Gastroenterology. 2014 Aug;147(2):418-29.e8.
7 Exploring genome-wide DNA methylation profiles altered in hepatocellular carcinoma using Infinium HumanMethylation 450 BeadChips. Epigenetics. 2013 Jan;8(1):34-43.
8 HIV-1 Infection Accelerates Age According to the Epigenetic Clock. J Infect Dis. 2015 Nov 15;212(10):1563-73.
9 DNA methylation analysis of lung adenocarcinoma and adjacent non-tumor tissues
10 DNA Methylation signatures in panic disorder. Transl Psychiatry. 2017 Dec 18;7(12):1287.
11 Prognostic Classifier Based on Genome-Wide DNA Methylation Profiling in Well-Differentiated Thyroid Tumors. J Clin Endocrinol Metab. 2017 Nov 1;102(11):4089-4099.
12 Genome-wide DNA methylation analysis of systemic lupus erythematosus reveals persistent hypomethylation of interferon genes and compositional changes to CD4+ T-cell populations. PLoS Genet. 2013;9(8):e1003678.
13 Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes. Cancer Cell. 2016 Mar 14;29(3):379-393.
14 DNA methylation and inflammation marker profiles associated with a history of depression. Hum Mol Genet. 2018 Aug 15;27(16):2840-2850.
15 Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling. Int J Cancer. 2014 Sep 1;135(5):1110-8.

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