Detail Information of Epigenetic Regulations
General Information of Drug Transporter (DT) | |||||
---|---|---|---|---|---|
DT ID | DTD0428 Transporter Info | ||||
Gene Name | SLC5A8 | ||||
Transporter Name | Sodium-coupled monocarboxylate transporter 1 | ||||
Gene ID | |||||
UniProt ID | |||||
Epigenetic Regulations of This DT (EGR) | |||||
---|---|---|---|---|---|
Methylation |
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Colon cancer |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of SLC5A8 in colon cancer | [ 1 ] | |||
Location |
Exon 1 | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Related Molecular Changes |
Down regulation of SLC5A8 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Frequency |
38 (59%) out of the 64 studied tumor sample | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
SLC5A8 had increased methylation and decreased expression in colon cancer. | ||||
Lung cancer |
2 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of SLC5A8 in lung cancer | [ 2 ] | |||
Location |
Promoter (-278 to +148 bp) | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Related Molecular Changes |
Down regulation of SLC5A8 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Lung cancer [ ICD-11: 2C25] | ||||
Frequency |
14 (61%) out of the 23 studied tumor sample | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
DNA methylation in the promoter region of SLC5A8 and its association with gene silencing of SLC5A8 in lung cancer cell lines and tumor tissues. | ||||
Lung adenocarcinoma |
7 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of SLC5A8 in lung adenocarcinoma | [ 3 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite pyrosequencing | ||
Related Molecular Changes |
Down regulation of SLC5A8 | Experiment Method | Immunohistochemical staining | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
The methylation level of exon 1 in the SLC5A8 gene was significantly associated with poor prognosis in cases of node-negative stage I and II lung AD. | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC5A8 in lung adenocarcinoma | [ 15 ] | |||
Location |
TSS200 (cg26490054) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.71E+00 | Statistic Test | p-value: 1.24E-02; Z-score: 3.76E+00 | ||
Methylation in Case |
1.56E-01 (Median) | Methylation in Control | 9.09E-02 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC5A8 in lung adenocarcinoma | [ 15 ] | |||
Location |
TSS200 (cg13433302) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.42E+00 | Statistic Test | p-value: 2.05E-02; Z-score: 2.85E+00 | ||
Methylation in Case |
2.47E-01 (Median) | Methylation in Control | 1.73E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC5A8 in lung adenocarcinoma | [ 15 ] | |||
Location |
TSS200 (cg12135976) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.30E+00 | Statistic Test | p-value: 2.24E-02; Z-score: 1.40E+00 | ||
Methylation in Case |
3.21E-01 (Median) | Methylation in Control | 2.47E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC5A8 in lung adenocarcinoma | [ 15 ] | |||
Location |
1stExon (cg05063104) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.26E+00 | Statistic Test | p-value: 9.70E-04; Z-score: 2.22E+00 | ||
Methylation in Case |
4.12E-01 (Median) | Methylation in Control | 3.27E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC5A8 in lung adenocarcinoma | [ 15 ] | |||
Location |
1stExon (cg14730445) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.16E+00 | Statistic Test | p-value: 2.40E-03; Z-score: 3.30E+00 | ||
Methylation in Case |
2.96E-01 (Median) | Methylation in Control | 1.37E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC5A8 in lung adenocarcinoma | [ 15 ] | |||
Location |
1stExon (cg10141715) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.46E+00 | Statistic Test | p-value: 5.41E-03; Z-score: 1.71E+00 | ||
Methylation in Case |
3.71E-01 (Median) | Methylation in Control | 2.54E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Bladder cancer |
13 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
TSS1500 (cg05193162) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.74E+00 | Statistic Test | p-value: 1.19E-08; Z-score: -7.46E+00 | ||
Methylation in Case |
4.21E-01 (Median) | Methylation in Control | 7.33E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
TSS1500 (cg27645544) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -2.16E+00 | Statistic Test | p-value: 1.43E-07; Z-score: -6.26E+00 | ||
Methylation in Case |
3.25E-01 (Median) | Methylation in Control | 7.01E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
TSS1500 (cg26622895) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.34E+00 | Statistic Test | p-value: 1.25E-05; Z-score: -3.14E+00 | ||
Methylation in Case |
5.49E-01 (Median) | Methylation in Control | 7.37E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
TSS200 (cg13433302) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.23E+00 | Statistic Test | p-value: 1.60E-03; Z-score: 3.41E+00 | ||
Methylation in Case |
1.58E-01 (Median) | Methylation in Control | 1.28E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
TSS200 (cg12135976) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.45E+00 | Statistic Test | p-value: 2.39E-02; Z-score: 2.78E+00 | ||
Methylation in Case |
2.20E-01 (Median) | Methylation in Control | 1.52E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
TSS200 (cg26490054) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.18E+00 | Statistic Test | p-value: 2.61E-02; Z-score: 7.21E-01 | ||
Methylation in Case |
7.29E-02 (Median) | Methylation in Control | 6.17E-02 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
1stExon (cg14730445) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 5.28E+00 | Statistic Test | p-value: 2.13E-08; Z-score: 1.11E+01 | ||
Methylation in Case |
5.17E-01 (Median) | Methylation in Control | 9.79E-02 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
1stExon (cg10141715) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.70E+00 | Statistic Test | p-value: 2.20E-08; Z-score: 1.40E+01 | ||
Methylation in Case |
4.98E-01 (Median) | Methylation in Control | 1.84E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
1stExon (cg05063104) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.43E+00 | Statistic Test | p-value: 1.92E-02; Z-score: 3.09E+00 | ||
Methylation in Case |
3.20E-01 (Median) | Methylation in Control | 2.25E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
Body (cg16287284) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -2.40E+00 | Statistic Test | p-value: 1.69E-11; Z-score: -1.22E+01 | ||
Methylation in Case |
2.46E-01 (Median) | Methylation in Control | 5.89E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
Body (cg18813959) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.13E+00 | Statistic Test | p-value: 1.01E-03; Z-score: -4.57E+00 | ||
Methylation in Case |
7.60E-01 (Median) | Methylation in Control | 8.59E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 12 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
Body (cg16005224) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.22E+00 | Statistic Test | p-value: 1.61E-02; Z-score: 1.67E+00 | ||
Methylation in Case |
4.41E-01 (Median) | Methylation in Control | 3.61E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 13 |
Methylation of SLC5A8 in bladder cancer | [ 4 ] | |||
Location |
3'UTR (cg06162589) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -2.35E+00 | Statistic Test | p-value: 1.31E-08; Z-score: -9.87E+00 | ||
Methylation in Case |
1.95E-01 (Median) | Methylation in Control | 4.58E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Breast cancer |
10 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in breast cancer | [ 5 ] | |||
Location |
TSS1500 (cg05193162) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.09E+00 | Statistic Test | p-value: 2.07E-03; Z-score: -4.97E-01 | ||
Methylation in Case |
6.85E-01 (Median) | Methylation in Control | 7.49E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC5A8 in breast cancer | [ 5 ] | |||
Location |
TSS1500 (cg27645544) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.06E+00 | Statistic Test | p-value: 1.60E-02; Z-score: -4.96E-01 | ||
Methylation in Case |
6.05E-01 (Median) | Methylation in Control | 6.42E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC5A8 in breast cancer | [ 5 ] | |||
Location |
TSS200 (cg26490054) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.37E+00 | Statistic Test | p-value: 6.63E-06; Z-score: 8.20E-01 | ||
Methylation in Case |
8.24E-02 (Median) | Methylation in Control | 6.04E-02 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC5A8 in breast cancer | [ 5 ] | |||
Location |
TSS200 (cg13433302) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.10E+00 | Statistic Test | p-value: 4.44E-04; Z-score: 3.96E-01 | ||
Methylation in Case |
1.52E-01 (Median) | Methylation in Control | 1.38E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC5A8 in breast cancer | [ 5 ] | |||
Location |
1stExon (cg14730445) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.09E+00 | Statistic Test | p-value: 1.37E-07; Z-score: 1.66E+00 | ||
Methylation in Case |
1.60E-01 (Median) | Methylation in Control | 7.64E-02 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC5A8 in breast cancer | [ 5 ] | |||
Location |
1stExon (cg10141715) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.38E+00 | Statistic Test | p-value: 2.10E-07; Z-score: 1.66E+00 | ||
Methylation in Case |
2.91E-01 (Median) | Methylation in Control | 2.11E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC5A8 in breast cancer | [ 5 ] | |||
Location |
1stExon (cg05063104) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.15E+00 | Statistic Test | p-value: 1.16E-03; Z-score: 1.00E+00 | ||
Methylation in Case |
3.30E-01 (Median) | Methylation in Control | 2.87E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC5A8 in breast cancer | [ 5 ] | |||
Location |
Body (cg18813959) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 2.08E-05; Z-score: -9.26E-01 | ||
Methylation in Case |
8.00E-01 (Median) | Methylation in Control | 8.32E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC5A8 in breast cancer | [ 5 ] | |||
Location |
Body (cg16005224) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.04E+00 | Statistic Test | p-value: 6.54E-03; Z-score: 4.99E-01 | ||
Methylation in Case |
4.56E-01 (Median) | Methylation in Control | 4.36E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of SLC5A8 in breast cancer | [ 5 ] | |||
Location |
3'UTR (cg06162589) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.12E+00 | Statistic Test | p-value: 3.54E-02; Z-score: -1.03E+00 | ||
Methylation in Case |
5.35E-01 (Median) | Methylation in Control | 6.01E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Renal cell carcinoma |
9 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in clear cell renal cell carcinoma | [ 6 ] | |||
Location |
TSS1500 (cg18841298) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.25E+00 | Statistic Test | p-value: 4.38E-05; Z-score: 1.33E+00 | ||
Methylation in Case |
5.14E-01 (Median) | Methylation in Control | 4.10E-01 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC5A8 in clear cell renal cell carcinoma | [ 6 ] | |||
Location |
TSS1500 (cg26622895) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.05E+00 | Statistic Test | p-value: 4.42E-04; Z-score: -1.71E+00 | ||
Methylation in Case |
8.89E-01 (Median) | Methylation in Control | 9.32E-01 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC5A8 in clear cell renal cell carcinoma | [ 6 ] | |||
Location |
TSS200 (cg12135976) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.58E+00 | Statistic Test | p-value: 9.33E-04; Z-score: 1.12E+00 | ||
Methylation in Case |
1.52E-01 (Median) | Methylation in Control | 9.65E-02 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC5A8 in clear cell renal cell carcinoma | [ 6 ] | |||
Location |
TSS200 (cg13433302) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.44E+00 | Statistic Test | p-value: 1.63E-03; Z-score: 8.66E-01 | ||
Methylation in Case |
8.20E-02 (Median) | Methylation in Control | 5.70E-02 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC5A8 in clear cell renal cell carcinoma | [ 6 ] | |||
Location |
TSS200 (cg26490054) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.21E+00 | Statistic Test | p-value: 5.75E-03; Z-score: 8.49E-01 | ||
Methylation in Case |
4.04E-02 (Median) | Methylation in Control | 3.33E-02 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC5A8 in clear cell renal cell carcinoma | [ 6 ] | |||
Location |
1stExon (cg10141715) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.49E+00 | Statistic Test | p-value: 5.07E-04; Z-score: 9.86E-01 | ||
Methylation in Case |
1.85E-01 (Median) | Methylation in Control | 1.24E-01 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC5A8 in clear cell renal cell carcinoma | [ 6 ] | |||
Location |
1stExon (cg14730445) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.97E+00 | Statistic Test | p-value: 5.90E-03; Z-score: 6.66E-01 | ||
Methylation in Case |
6.90E-02 (Median) | Methylation in Control | 3.50E-02 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC5A8 in clear cell renal cell carcinoma | [ 6 ] | |||
Location |
1stExon (cg05063104) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.21E+00 | Statistic Test | p-value: 3.55E-02; Z-score: -1.15E+00 | ||
Methylation in Case |
2.53E-01 (Median) | Methylation in Control | 3.05E-01 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC5A8 in clear cell renal cell carcinoma | [ 6 ] | |||
Location |
Body (cg16005224) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.21E+00 | Statistic Test | p-value: 7.49E-03; Z-score: -2.26E+00 | ||
Methylation in Case |
3.87E-01 (Median) | Methylation in Control | 4.70E-01 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Colon cancer |
8 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in colon adenocarcinoma | [ 7 ] | |||
Location |
TSS1500 (cg24977541) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.20E+00 | Statistic Test | p-value: 1.98E-05; Z-score: -3.73E+00 | ||
Methylation in Case |
6.21E-01 (Median) | Methylation in Control | 7.45E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC5A8 in colon adenocarcinoma | [ 7 ] | |||
Location |
TSS1500 (cg24314549) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.15E+00 | Statistic Test | p-value: 1.16E-04; Z-score: -9.85E-01 | ||
Methylation in Case |
1.58E-01 (Median) | Methylation in Control | 1.81E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC5A8 in colon adenocarcinoma | [ 7 ] | |||
Location |
TSS1500 (cg10761097) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.11E+00 | Statistic Test | p-value: 1.14E-03; Z-score: -3.12E+00 | ||
Methylation in Case |
7.72E-01 (Median) | Methylation in Control | 8.55E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC5A8 in colon adenocarcinoma | [ 7 ] | |||
Location |
Body (cg15053022) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.24E+00 | Statistic Test | p-value: 1.03E-04; Z-score: 1.78E+00 | ||
Methylation in Case |
4.52E-01 (Median) | Methylation in Control | 3.63E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC5A8 in colon adenocarcinoma | [ 7 ] | |||
Location |
Body (cg22162312) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.19E+00 | Statistic Test | p-value: 1.85E-04; Z-score: -2.66E+00 | ||
Methylation in Case |
6.08E-01 (Median) | Methylation in Control | 7.23E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC5A8 in colon adenocarcinoma | [ 7 ] | |||
Location |
Body (cg14474561) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.29E+00 | Statistic Test | p-value: 2.90E-04; Z-score: -2.42E+00 | ||
Methylation in Case |
3.38E-01 (Median) | Methylation in Control | 4.37E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC5A8 in colon adenocarcinoma | [ 7 ] | |||
Location |
Body (cg20954180) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.14E+00 | Statistic Test | p-value: 9.14E-04; Z-score: -2.28E+00 | ||
Methylation in Case |
7.19E-01 (Median) | Methylation in Control | 8.22E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC5A8 in colon adenocarcinoma | [ 7 ] | |||
Location |
Body (cg02034204) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.12E+00 | Statistic Test | p-value: 9.42E-04; Z-score: -1.22E+00 | ||
Methylation in Case |
5.79E-01 (Median) | Methylation in Control | 6.50E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Colorectal cancer |
12 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in colorectal cancer | [ 8 ] | |||
Location |
TSS1500 (cg27645544) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 5.77E-04; Z-score: -3.84E-01 | ||
Methylation in Case |
7.44E-01 (Median) | Methylation in Control | 7.70E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC5A8 in colorectal cancer | [ 8 ] | |||
Location |
TSS1500 (cg05193162) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.09E+00 | Statistic Test | p-value: 8.51E-03; Z-score: -4.93E-01 | ||
Methylation in Case |
6.24E-01 (Median) | Methylation in Control | 6.78E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC5A8 in colorectal cancer | [ 8 ] | |||
Location |
TSS200 (cg13433302) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.30E+00 | Statistic Test | p-value: 1.26E-06; Z-score: 1.97E+00 | ||
Methylation in Case |
2.78E-01 (Median) | Methylation in Control | 2.14E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC5A8 in colorectal cancer | [ 8 ] | |||
Location |
TSS200 (cg26490054) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.19E+00 | Statistic Test | p-value: 3.61E-05; Z-score: 7.45E-01 | ||
Methylation in Case |
8.43E-02 (Median) | Methylation in Control | 7.11E-02 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC5A8 in colorectal cancer | [ 8 ] | |||
Location |
TSS200 (cg12135976) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.15E+00 | Statistic Test | p-value: 1.18E-04; Z-score: 6.89E-01 | ||
Methylation in Case |
3.25E-01 (Median) | Methylation in Control | 2.83E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC5A8 in colorectal cancer | [ 8 ] | |||
Location |
1stExon (cg14730445) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.59E+00 | Statistic Test | p-value: 1.65E-10; Z-score: 2.97E+00 | ||
Methylation in Case |
5.07E-01 (Median) | Methylation in Control | 1.96E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC5A8 in colorectal cancer | [ 8 ] | |||
Location |
1stExon (cg10141715) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.27E+00 | Statistic Test | p-value: 2.14E-06; Z-score: 1.32E+00 | ||
Methylation in Case |
7.17E-01 (Median) | Methylation in Control | 5.62E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC5A8 in colorectal cancer | [ 8 ] | |||
Location |
1stExon (cg05063104) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.18E+00 | Statistic Test | p-value: 2.41E-05; Z-score: 1.25E+00 | ||
Methylation in Case |
6.52E-01 (Median) | Methylation in Control | 5.53E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC5A8 in colorectal cancer | [ 8 ] | |||
Location |
Body (cg16287284) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.08E+00 | Statistic Test | p-value: 3.51E-03; Z-score: -1.11E+00 | ||
Methylation in Case |
7.41E-01 (Median) | Methylation in Control | 8.01E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of SLC5A8 in colorectal cancer | [ 8 ] | |||
Location |
Body (cg18813959) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.00E+00 | Statistic Test | p-value: 5.12E-03; Z-score: -9.17E-02 | ||
Methylation in Case |
9.19E-01 (Median) | Methylation in Control | 9.21E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of SLC5A8 in colorectal cancer | [ 8 ] | |||
Location |
3'UTR (cg06162589) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.25E+00 | Statistic Test | p-value: 8.01E-11; Z-score: -3.14E+00 | ||
Methylation in Case |
5.91E-01 (Median) | Methylation in Control | 7.36E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Hepatocellular carcinoma |
9 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in hepatocellular carcinoma | [ 9 ] | |||
Location |
TSS1500 (cg13424870) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.30E+00 | Statistic Test | p-value: 2.28E-17; Z-score: 2.82E+00 | ||
Methylation in Case |
4.04E-01 (Median) | Methylation in Control | 1.76E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC5A8 in hepatocellular carcinoma | [ 9 ] | |||
Location |
TSS200 (cg12135976) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.40E+00 | Statistic Test | p-value: 1.34E-05; Z-score: -1.45E+00 | ||
Methylation in Case |
1.51E-01 (Median) | Methylation in Control | 2.11E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC5A8 in hepatocellular carcinoma | [ 9 ] | |||
Location |
1stExon (cg05063104) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.27E+00 | Statistic Test | p-value: 5.09E-04; Z-score: -1.53E+00 | ||
Methylation in Case |
2.09E-01 (Median) | Methylation in Control | 2.65E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC5A8 in hepatocellular carcinoma | [ 9 ] | |||
Location |
1stExon (cg10141715) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.21E+00 | Statistic Test | p-value: 4.04E-03; Z-score: 1.18E+00 | ||
Methylation in Case |
2.97E-01 (Median) | Methylation in Control | 2.45E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC5A8 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg09455805) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.47E+00 | Statistic Test | p-value: 3.80E-20; Z-score: -2.13E+00 | ||
Methylation in Case |
5.04E-01 (Median) | Methylation in Control | 7.40E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC5A8 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg07878951) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.44E+00 | Statistic Test | p-value: 1.82E-14; Z-score: -6.91E+00 | ||
Methylation in Case |
5.16E-01 (Median) | Methylation in Control | 7.40E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC5A8 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg08362628) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.29E+00 | Statistic Test | p-value: 6.64E-13; Z-score: -5.68E+00 | ||
Methylation in Case |
6.12E-01 (Median) | Methylation in Control | 7.92E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC5A8 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg17806661) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.52E+00 | Statistic Test | p-value: 1.49E-12; Z-score: -2.04E+00 | ||
Methylation in Case |
2.73E-01 (Median) | Methylation in Control | 4.15E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC5A8 in hepatocellular carcinoma | [ 9 ] | |||
Location |
Body (cg16005224) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.26E+00 | Statistic Test | p-value: 1.56E-04; Z-score: -2.16E+00 | ||
Methylation in Case |
3.08E-01 (Median) | Methylation in Control | 3.89E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
HIV infection |
11 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in HIV infection | [ 10 ] | |||
Location |
TSS1500 (cg05193162) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 3.49E-04; Z-score: -8.42E-01 | ||
Methylation in Case |
8.62E-01 (Median) | Methylation in Control | 8.94E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC5A8 in HIV infection | [ 10 ] | |||
Location |
TSS1500 (cg27645544) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 4.60E-02; Z-score: -5.53E-01 | ||
Methylation in Case |
7.03E-01 (Median) | Methylation in Control | 7.33E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC5A8 in HIV infection | [ 10 ] | |||
Location |
TSS200 (cg26490054) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.54E+00 | Statistic Test | p-value: 4.60E-06; Z-score: 1.32E+00 | ||
Methylation in Case |
1.23E-01 (Median) | Methylation in Control | 7.99E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC5A8 in HIV infection | [ 10 ] | |||
Location |
TSS200 (cg13433302) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.28E+00 | Statistic Test | p-value: 1.13E-04; Z-score: 1.07E+00 | ||
Methylation in Case |
2.05E-01 (Median) | Methylation in Control | 1.60E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC5A8 in HIV infection | [ 10 ] | |||
Location |
TSS200 (cg12135976) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.26E+00 | Statistic Test | p-value: 2.81E-04; Z-score: 1.08E+00 | ||
Methylation in Case |
3.47E-01 (Median) | Methylation in Control | 2.75E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC5A8 in HIV infection | [ 10 ] | |||
Location |
1stExon (cg10141715) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.37E+00 | Statistic Test | p-value: 5.14E-06; Z-score: 1.88E+00 | ||
Methylation in Case |
3.26E-01 (Median) | Methylation in Control | 2.38E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC5A8 in HIV infection | [ 10 ] | |||
Location |
1stExon (cg14730445) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.04E+00 | Statistic Test | p-value: 3.63E-05; Z-score: 1.77E+00 | ||
Methylation in Case |
1.82E-01 (Median) | Methylation in Control | 8.91E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC5A8 in HIV infection | [ 10 ] | |||
Location |
1stExon (cg05063104) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.06E+00 | Statistic Test | p-value: 1.65E-02; Z-score: 3.43E-01 | ||
Methylation in Case |
3.14E-01 (Median) | Methylation in Control | 2.96E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC5A8 in HIV infection | [ 10 ] | |||
Location |
Body (cg16287284) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.07E+00 | Statistic Test | p-value: 3.78E-02; Z-score: -5.99E-01 | ||
Methylation in Case |
6.54E-01 (Median) | Methylation in Control | 7.03E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of SLC5A8 in HIV infection | [ 10 ] | |||
Location |
Body (cg16005224) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.07E+00 | Statistic Test | p-value: 4.05E-02; Z-score: 4.39E-01 | ||
Methylation in Case |
4.98E-01 (Median) | Methylation in Control | 4.67E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of SLC5A8 in HIV infection | [ 10 ] | |||
Location |
3'UTR (cg06162589) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.14E+00 | Statistic Test | p-value: 1.17E-04; Z-score: -2.12E+00 | ||
Methylation in Case |
6.19E-01 (Median) | Methylation in Control | 7.05E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Pancretic ductal adenocarcinoma |
11 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in pancretic ductal adenocarcinoma | [ 11 ] | |||
Location |
TSS1500 (cg18143243) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 4.56E+00 | Statistic Test | p-value: 1.77E-23; Z-score: 4.53E+00 | ||
Methylation in Case |
4.55E-01 (Median) | Methylation in Control | 9.98E-02 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC5A8 in pancretic ductal adenocarcinoma | [ 11 ] | |||
Location |
TSS1500 (cg06794441) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.21E+00 | Statistic Test | p-value: 1.36E-05; Z-score: 1.23E+00 | ||
Methylation in Case |
8.54E-01 (Median) | Methylation in Control | 7.07E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC5A8 in pancretic ductal adenocarcinoma | [ 11 ] | |||
Location |
TSS1500 (cg21861233) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 7.78E-05; Z-score: -3.92E-01 | ||
Methylation in Case |
8.05E-01 (Median) | Methylation in Control | 8.16E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC5A8 in pancretic ductal adenocarcinoma | [ 11 ] | |||
Location |
TSS1500 (cg21507866) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.06E+00 | Statistic Test | p-value: 1.21E-03; Z-score: 2.26E-01 | ||
Methylation in Case |
1.02E-01 (Median) | Methylation in Control | 9.62E-02 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC5A8 in pancretic ductal adenocarcinoma | [ 11 ] | |||
Location |
TSS200 (cg04191954) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.28E+00 | Statistic Test | p-value: 1.93E-08; Z-score: 6.60E-01 | ||
Methylation in Case |
1.42E-01 (Median) | Methylation in Control | 1.11E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC5A8 in pancretic ductal adenocarcinoma | [ 11 ] | |||
Location |
TSS200 (cg06748231) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.08E+00 | Statistic Test | p-value: 2.08E-04; Z-score: -6.38E-01 | ||
Methylation in Case |
7.92E-02 (Median) | Methylation in Control | 8.55E-02 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC5A8 in pancretic ductal adenocarcinoma | [ 11 ] | |||
Location |
TSS200 (cg23654327) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.15E+00 | Statistic Test | p-value: 4.62E-03; Z-score: -7.89E-01 | ||
Methylation in Case |
4.14E-02 (Median) | Methylation in Control | 4.74E-02 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of SLC5A8 in pancretic ductal adenocarcinoma | [ 11 ] | |||
Location |
Body (cg02190353) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.54E+00 | Statistic Test | p-value: 1.02E-20; Z-score: -2.83E+00 | ||
Methylation in Case |
3.50E-01 (Median) | Methylation in Control | 5.38E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of SLC5A8 in pancretic ductal adenocarcinoma | [ 11 ] | |||
Location |
Body (cg14341131) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.47E+00 | Statistic Test | p-value: 6.65E-10; Z-score: -2.06E+00 | ||
Methylation in Case |
4.33E-01 (Median) | Methylation in Control | 6.36E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of SLC5A8 in pancretic ductal adenocarcinoma | [ 11 ] | |||
Location |
Body (cg16548605) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.17E+00 | Statistic Test | p-value: 1.51E-02; Z-score: 5.73E-01 | ||
Methylation in Case |
6.24E-01 (Median) | Methylation in Control | 5.31E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of SLC5A8 in pancretic ductal adenocarcinoma | [ 11 ] | |||
Location |
Body (cg06556827) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.03E+00 | Statistic Test | p-value: 4.72E-02; Z-score: 5.21E-01 | ||
Methylation in Case |
8.46E-01 (Median) | Methylation in Control | 8.23E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Papillary thyroid cancer |
8 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in papillary thyroid cancer | [ 12 ] | |||
Location |
TSS1500 (cg27645544) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.05E+00 | Statistic Test | p-value: 8.47E-04; Z-score: -8.70E-01 | ||
Methylation in Case |
7.80E-01 (Median) | Methylation in Control | 8.22E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC5A8 in papillary thyroid cancer | [ 12 ] | |||
Location |
TSS1500 (cg26622895) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.03E+00 | Statistic Test | p-value: 2.49E-03; Z-score: -9.28E-01 | ||
Methylation in Case |
8.60E-01 (Median) | Methylation in Control | 8.82E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC5A8 in papillary thyroid cancer | [ 12 ] | |||
Location |
TSS1500 (cg05193162) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.03E+00 | Statistic Test | p-value: 2.83E-03; Z-score: -7.90E-01 | ||
Methylation in Case |
8.66E-01 (Median) | Methylation in Control | 8.89E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC5A8 in papillary thyroid cancer | [ 12 ] | |||
Location |
1stExon (cg10141715) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.16E+00 | Statistic Test | p-value: 3.02E-02; Z-score: 4.82E-01 | ||
Methylation in Case |
1.38E-01 (Median) | Methylation in Control | 1.18E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of SLC5A8 in papillary thyroid cancer | [ 12 ] | |||
Location |
Body (cg16287284) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.05E+00 | Statistic Test | p-value: 3.52E-02; Z-score: 3.80E-01 | ||
Methylation in Case |
5.56E-01 (Median) | Methylation in Control | 5.29E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of SLC5A8 in papillary thyroid cancer | [ 12 ] | |||
Location |
Body (cg16005224) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.20E+00 | Statistic Test | p-value: 3.76E-02; Z-score: 1.00E+00 | ||
Methylation in Case |
4.22E-01 (Median) | Methylation in Control | 3.53E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of SLC5A8 in papillary thyroid cancer | [ 12 ] | |||
Location |
3'UTR (cg06162589) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.06E+00 | Statistic Test | p-value: 2.34E-06; Z-score: -1.13E+00 | ||
Methylation in Case |
7.60E-01 (Median) | Methylation in Control | 8.07E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Hypermethylation of SLC5A8 in papillary thyroid cancers | [ 18 ] | |||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Frequency |
34 (40%) out of the 86 studied tumor samples | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
The Hypermethylation status of SLC5A8 had been associated with advanced tumors, plurifocality, and extrathyroidal invasion. | ||||
Prostate cancer |
2 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in prostate cancer | [ 13 ] | |||
Location |
TSS1500 (cg21090344) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.68E+00 | Statistic Test | p-value: 1.32E-04; Z-score: -5.49E+00 | ||
Methylation in Case |
3.53E-01 (Median) | Methylation in Control | 5.93E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Systemic lupus erythematosus |
4 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in systemic lupus erythematosus | [ 14 ] | |||
Location |
TSS1500 (cg26622895) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.00E+00 | Statistic Test | p-value: 1.12E-02; Z-score: -7.64E-02 | ||
Methylation in Case |
8.46E-01 (Median) | Methylation in Control | 8.49E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC5A8 in systemic lupus erythematosus | [ 14 ] | |||
Location |
TSS1500 (cg27645544) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.00E+00 | Statistic Test | p-value: 4.04E-02; Z-score: -3.59E-02 | ||
Methylation in Case |
7.28E-01 (Median) | Methylation in Control | 7.31E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC5A8 in systemic lupus erythematosus | [ 14 ] | |||
Location |
TSS200 (cg12135976) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.06E+00 | Statistic Test | p-value: 3.62E-02; Z-score: 3.46E-01 | ||
Methylation in Case |
3.84E-01 (Median) | Methylation in Control | 3.61E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC5A8 in systemic lupus erythematosus | [ 14 ] | |||
Location |
3'UTR (cg06162589) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 4.78E-02; Z-score: -1.50E-01 | ||
Methylation in Case |
7.03E-01 (Median) | Methylation in Control | 7.18E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Atypical teratoid rhabdoid tumor |
4 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in atypical teratoid rhabdoid tumor | [ 16 ] | |||
Location |
1stExon (cg05063104) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.74E+00 | Statistic Test | p-value: 8.66E-24; Z-score: -3.78E+00 | ||
Methylation in Case |
4.71E-01 (Median) | Methylation in Control | 8.19E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of SLC5A8 in atypical teratoid rhabdoid tumor | [ 16 ] | |||
Location |
1stExon (cg10141715) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.27E+00 | Statistic Test | p-value: 3.54E-20; Z-score: -4.62E+00 | ||
Methylation in Case |
6.91E-01 (Median) | Methylation in Control | 8.74E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of SLC5A8 in atypical teratoid rhabdoid tumor | [ 16 ] | |||
Location |
1stExon (cg14730445) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.32E+00 | Statistic Test | p-value: 3.99E-19; Z-score: -3.42E+00 | ||
Methylation in Case |
6.13E-01 (Median) | Methylation in Control | 8.10E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of SLC5A8 in atypical teratoid rhabdoid tumor | [ 16 ] | |||
Location |
3'UTR (cg06162589) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.53E+00 | Statistic Test | p-value: 1.02E-13; Z-score: 2.48E+00 | ||
Methylation in Case |
6.02E-01 (Median) | Methylation in Control | 2.38E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Depression |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of SLC5A8 in depression | [ 17 ] | |||
Location |
Body (cg16287284) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.05E+00 | Statistic Test | p-value: 3.26E-02; Z-score: -4.03E-01 | ||
Methylation in Case |
5.43E-01 (Median) | Methylation in Control | 5.72E-01 (Median) | ||
Studied Phenotype |
Depression [ ICD-11: 6A8Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Lymphoma |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Significant hypermethylation of SLC5A8 in lymphoma than that in healthy individual | ||||
Studied Phenotype |
Lymphoma [ICD-11:2B30] | ||||
The Methylation Level of Disease Section Compare with the Healthy Individual |
p-value: 1.07E-26; Fold-change: 0.480638038; Z-score: 2.818004899 | ||||
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
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Please Click the above Thumbnail to View/Download the Methylation Barchart for All Samples | |||||
microRNA |
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Unclear Phenotype |
9 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
miR-200a directly targets SLC5A8 | [ 19 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-200a | miRNA Mature ID | miR-200a-5p | ||
miRNA Sequence |
CAUCUUACCGGACAGUGCUGGA | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 2 |
miR-200b directly targets SLC5A8 | [ 19 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-200b | miRNA Mature ID | miR-200b-5p | ||
miRNA Sequence |
CAUCUUACUGGGCAGCAUUGGA | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 3 |
miR-3151 directly targets SLC5A8 | [ 19 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-3151 | miRNA Mature ID | miR-3151-3p | ||
miRNA Sequence |
CCUGAUCCCACAGCCCACCU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 4 |
miR-3156 directly targets SLC5A8 | [ 20 ] | |||
Epigenetic Type |
microRNA | Experiment Method | PAR-CLIP | ||
miRNA Stemloop ID |
miR-3156 | miRNA Mature ID | miR-3156-5p | ||
miRNA Sequence |
AAAGAUCUGGAAGUGGGAGACA | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Human embryonic kidney 293 cells (HEK293) | ||||
Epigenetic Phenomenon 5 |
miR-4305 directly targets SLC5A8 | [ 21 ] | |||
Epigenetic Type |
microRNA | Experiment Method | PAR-CLIP | ||
miRNA Stemloop ID |
miR-4305 | miRNA Mature ID | miR-4305 | ||
miRNA Sequence |
CCUAGACACCUCCAGUUC | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Human embryonic kidney 293 cells (HEK293) | ||||
Epigenetic Phenomenon 6 |
miR-4777 directly targets SLC5A8 | [ 21 ] | |||
Epigenetic Type |
microRNA | Experiment Method | PAR-CLIP | ||
miRNA Stemloop ID |
miR-4777 | miRNA Mature ID | miR-4777-3p | ||
miRNA Sequence |
AUACCUCAUCUAGAAUGCUGUA | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Human embryonic kidney 293 cells (HEK293) | ||||
Epigenetic Phenomenon 7 |
miR-570 directly targets SLC5A8 | [ 19 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-570 | miRNA Mature ID | miR-570-3p | ||
miRNA Sequence |
CGAAAACAGCAAUUACCUUUGC | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 8 |
miR-640 directly targets SLC5A8 | [ 19 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-640 | miRNA Mature ID | miR-640 | ||
miRNA Sequence |
AUGAUCCAGGAACCUGCCUCU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 9 |
miR-8485 directly targets SLC5A8 | [ 19 ] | |||
Epigenetic Type |
microRNA | Experiment Method | HITS-CLIP | ||
miRNA Stemloop ID |
miR-8485 | miRNA Mature ID | miR-8485 | ||
miRNA Sequence |
CACACACACACACACACGUAU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
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