General Information of Drug Transporter (DT)
DT ID DTD0428 Transporter Info
Gene Name SLC5A8
Transporter Name Sodium-coupled monocarboxylate transporter 1
Gene ID
160728
UniProt ID
Q8N695
Epigenetic Regulations of This DT (EGR)

Methylation

  Colon cancer

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of SLC5A8 in colon cancer [ 1 ]

Location

Exon 1

Epigenetic Type

Methylation Experiment Method Methylation-specific PCR

Related Molecular Changes

Down regulation of SLC5A8 Experiment Method RT-qPCR

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Frequency

38 (59%) out of the 64 studied tumor sample

Experimental Material

Patient tissue samples

Additional Notes

SLC5A8 had increased methylation and decreased expression in colon cancer.

  Lung cancer

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of SLC5A8 in lung cancer [ 2 ]

Location

Promoter (-278 to +148 bp)

Epigenetic Type

Methylation Experiment Method Methylation-specific PCR

Related Molecular Changes

Down regulation of SLC5A8 Experiment Method RT-qPCR

Studied Phenotype

Lung cancer [ ICD-11: 2C25]

Frequency

14 (61%) out of the 23 studied tumor sample

Experimental Material

Patient tissue samples

Additional Notes

DNA methylation in the promoter region of SLC5A8 and its association with gene silencing of SLC5A8 in lung cancer cell lines and tumor tissues.

  Lung adenocarcinoma

           7 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of SLC5A8 in lung adenocarcinoma [ 3 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Bisulfite pyrosequencing

Related Molecular Changes

Down regulation of SLC5A8 Experiment Method Immunohistochemical staining

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

Additional Notes

The methylation level of exon 1 in the SLC5A8 gene was significantly associated with poor prognosis in cases of node-negative stage I and II lung AD.

  Epigenetic Phenomenon 2

Methylation of SLC5A8 in lung adenocarcinoma [ 15 ]

Location

TSS200 (cg26490054)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.71E+00 Statistic Test p-value: 1.24E-02; Z-score: 3.76E+00

Methylation in Case

1.56E-01 (Median) Methylation in Control 9.09E-02 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC5A8 in lung adenocarcinoma [ 15 ]

Location

TSS200 (cg13433302)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.42E+00 Statistic Test p-value: 2.05E-02; Z-score: 2.85E+00

Methylation in Case

2.47E-01 (Median) Methylation in Control 1.73E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC5A8 in lung adenocarcinoma [ 15 ]

Location

TSS200 (cg12135976)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.30E+00 Statistic Test p-value: 2.24E-02; Z-score: 1.40E+00

Methylation in Case

3.21E-01 (Median) Methylation in Control 2.47E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC5A8 in lung adenocarcinoma [ 15 ]

Location

1stExon (cg05063104)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.26E+00 Statistic Test p-value: 9.70E-04; Z-score: 2.22E+00

Methylation in Case

4.12E-01 (Median) Methylation in Control 3.27E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC5A8 in lung adenocarcinoma [ 15 ]

Location

1stExon (cg14730445)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.16E+00 Statistic Test p-value: 2.40E-03; Z-score: 3.30E+00

Methylation in Case

2.96E-01 (Median) Methylation in Control 1.37E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC5A8 in lung adenocarcinoma [ 15 ]

Location

1stExon (cg10141715)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.46E+00 Statistic Test p-value: 5.41E-03; Z-score: 1.71E+00

Methylation in Case

3.71E-01 (Median) Methylation in Control 2.54E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Bladder cancer

         13 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

TSS1500 (cg05193162)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.74E+00 Statistic Test p-value: 1.19E-08; Z-score: -7.46E+00

Methylation in Case

4.21E-01 (Median) Methylation in Control 7.33E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

TSS1500 (cg27645544)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.16E+00 Statistic Test p-value: 1.43E-07; Z-score: -6.26E+00

Methylation in Case

3.25E-01 (Median) Methylation in Control 7.01E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

TSS1500 (cg26622895)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.34E+00 Statistic Test p-value: 1.25E-05; Z-score: -3.14E+00

Methylation in Case

5.49E-01 (Median) Methylation in Control 7.37E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

TSS200 (cg13433302)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.23E+00 Statistic Test p-value: 1.60E-03; Z-score: 3.41E+00

Methylation in Case

1.58E-01 (Median) Methylation in Control 1.28E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

TSS200 (cg12135976)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.45E+00 Statistic Test p-value: 2.39E-02; Z-score: 2.78E+00

Methylation in Case

2.20E-01 (Median) Methylation in Control 1.52E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

TSS200 (cg26490054)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+00 Statistic Test p-value: 2.61E-02; Z-score: 7.21E-01

Methylation in Case

7.29E-02 (Median) Methylation in Control 6.17E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

1stExon (cg14730445)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 5.28E+00 Statistic Test p-value: 2.13E-08; Z-score: 1.11E+01

Methylation in Case

5.17E-01 (Median) Methylation in Control 9.79E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

1stExon (cg10141715)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.70E+00 Statistic Test p-value: 2.20E-08; Z-score: 1.40E+01

Methylation in Case

4.98E-01 (Median) Methylation in Control 1.84E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

1stExon (cg05063104)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.43E+00 Statistic Test p-value: 1.92E-02; Z-score: 3.09E+00

Methylation in Case

3.20E-01 (Median) Methylation in Control 2.25E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

Body (cg16287284)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.40E+00 Statistic Test p-value: 1.69E-11; Z-score: -1.22E+01

Methylation in Case

2.46E-01 (Median) Methylation in Control 5.89E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

Body (cg18813959)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.13E+00 Statistic Test p-value: 1.01E-03; Z-score: -4.57E+00

Methylation in Case

7.60E-01 (Median) Methylation in Control 8.59E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

Body (cg16005224)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.22E+00 Statistic Test p-value: 1.61E-02; Z-score: 1.67E+00

Methylation in Case

4.41E-01 (Median) Methylation in Control 3.61E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of SLC5A8 in bladder cancer [ 4 ]

Location

3'UTR (cg06162589)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.35E+00 Statistic Test p-value: 1.31E-08; Z-score: -9.87E+00

Methylation in Case

1.95E-01 (Median) Methylation in Control 4.58E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Breast cancer

         10 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in breast cancer [ 5 ]

Location

TSS1500 (cg05193162)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 2.07E-03; Z-score: -4.97E-01

Methylation in Case

6.85E-01 (Median) Methylation in Control 7.49E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC5A8 in breast cancer [ 5 ]

Location

TSS1500 (cg27645544)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 1.60E-02; Z-score: -4.96E-01

Methylation in Case

6.05E-01 (Median) Methylation in Control 6.42E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC5A8 in breast cancer [ 5 ]

Location

TSS200 (cg26490054)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.37E+00 Statistic Test p-value: 6.63E-06; Z-score: 8.20E-01

Methylation in Case

8.24E-02 (Median) Methylation in Control 6.04E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC5A8 in breast cancer [ 5 ]

Location

TSS200 (cg13433302)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.10E+00 Statistic Test p-value: 4.44E-04; Z-score: 3.96E-01

Methylation in Case

1.52E-01 (Median) Methylation in Control 1.38E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC5A8 in breast cancer [ 5 ]

Location

1stExon (cg14730445)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.09E+00 Statistic Test p-value: 1.37E-07; Z-score: 1.66E+00

Methylation in Case

1.60E-01 (Median) Methylation in Control 7.64E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC5A8 in breast cancer [ 5 ]

Location

1stExon (cg10141715)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.38E+00 Statistic Test p-value: 2.10E-07; Z-score: 1.66E+00

Methylation in Case

2.91E-01 (Median) Methylation in Control 2.11E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC5A8 in breast cancer [ 5 ]

Location

1stExon (cg05063104)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.15E+00 Statistic Test p-value: 1.16E-03; Z-score: 1.00E+00

Methylation in Case

3.30E-01 (Median) Methylation in Control 2.87E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC5A8 in breast cancer [ 5 ]

Location

Body (cg18813959)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 2.08E-05; Z-score: -9.26E-01

Methylation in Case

8.00E-01 (Median) Methylation in Control 8.32E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC5A8 in breast cancer [ 5 ]

Location

Body (cg16005224)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 6.54E-03; Z-score: 4.99E-01

Methylation in Case

4.56E-01 (Median) Methylation in Control 4.36E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC5A8 in breast cancer [ 5 ]

Location

3'UTR (cg06162589)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.12E+00 Statistic Test p-value: 3.54E-02; Z-score: -1.03E+00

Methylation in Case

5.35E-01 (Median) Methylation in Control 6.01E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Renal cell carcinoma

           9 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in clear cell renal cell carcinoma [ 6 ]

Location

TSS1500 (cg18841298)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.25E+00 Statistic Test p-value: 4.38E-05; Z-score: 1.33E+00

Methylation in Case

5.14E-01 (Median) Methylation in Control 4.10E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC5A8 in clear cell renal cell carcinoma [ 6 ]

Location

TSS1500 (cg26622895)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 4.42E-04; Z-score: -1.71E+00

Methylation in Case

8.89E-01 (Median) Methylation in Control 9.32E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC5A8 in clear cell renal cell carcinoma [ 6 ]

Location

TSS200 (cg12135976)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.58E+00 Statistic Test p-value: 9.33E-04; Z-score: 1.12E+00

Methylation in Case

1.52E-01 (Median) Methylation in Control 9.65E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC5A8 in clear cell renal cell carcinoma [ 6 ]

Location

TSS200 (cg13433302)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.44E+00 Statistic Test p-value: 1.63E-03; Z-score: 8.66E-01

Methylation in Case

8.20E-02 (Median) Methylation in Control 5.70E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC5A8 in clear cell renal cell carcinoma [ 6 ]

Location

TSS200 (cg26490054)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.21E+00 Statistic Test p-value: 5.75E-03; Z-score: 8.49E-01

Methylation in Case

4.04E-02 (Median) Methylation in Control 3.33E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC5A8 in clear cell renal cell carcinoma [ 6 ]

Location

1stExon (cg10141715)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.49E+00 Statistic Test p-value: 5.07E-04; Z-score: 9.86E-01

Methylation in Case

1.85E-01 (Median) Methylation in Control 1.24E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC5A8 in clear cell renal cell carcinoma [ 6 ]

Location

1stExon (cg14730445)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.97E+00 Statistic Test p-value: 5.90E-03; Z-score: 6.66E-01

Methylation in Case

6.90E-02 (Median) Methylation in Control 3.50E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC5A8 in clear cell renal cell carcinoma [ 6 ]

Location

1stExon (cg05063104)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.21E+00 Statistic Test p-value: 3.55E-02; Z-score: -1.15E+00

Methylation in Case

2.53E-01 (Median) Methylation in Control 3.05E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC5A8 in clear cell renal cell carcinoma [ 6 ]

Location

Body (cg16005224)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.21E+00 Statistic Test p-value: 7.49E-03; Z-score: -2.26E+00

Methylation in Case

3.87E-01 (Median) Methylation in Control 4.70E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Colon cancer

           8 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in colon adenocarcinoma [ 7 ]

Location

TSS1500 (cg24977541)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.20E+00 Statistic Test p-value: 1.98E-05; Z-score: -3.73E+00

Methylation in Case

6.21E-01 (Median) Methylation in Control 7.45E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC5A8 in colon adenocarcinoma [ 7 ]

Location

TSS1500 (cg24314549)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 1.16E-04; Z-score: -9.85E-01

Methylation in Case

1.58E-01 (Median) Methylation in Control 1.81E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC5A8 in colon adenocarcinoma [ 7 ]

Location

TSS1500 (cg10761097)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.11E+00 Statistic Test p-value: 1.14E-03; Z-score: -3.12E+00

Methylation in Case

7.72E-01 (Median) Methylation in Control 8.55E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC5A8 in colon adenocarcinoma [ 7 ]

Location

Body (cg15053022)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.24E+00 Statistic Test p-value: 1.03E-04; Z-score: 1.78E+00

Methylation in Case

4.52E-01 (Median) Methylation in Control 3.63E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC5A8 in colon adenocarcinoma [ 7 ]

Location

Body (cg22162312)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.19E+00 Statistic Test p-value: 1.85E-04; Z-score: -2.66E+00

Methylation in Case

6.08E-01 (Median) Methylation in Control 7.23E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC5A8 in colon adenocarcinoma [ 7 ]

Location

Body (cg14474561)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.29E+00 Statistic Test p-value: 2.90E-04; Z-score: -2.42E+00

Methylation in Case

3.38E-01 (Median) Methylation in Control 4.37E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC5A8 in colon adenocarcinoma [ 7 ]

Location

Body (cg20954180)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.14E+00 Statistic Test p-value: 9.14E-04; Z-score: -2.28E+00

Methylation in Case

7.19E-01 (Median) Methylation in Control 8.22E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC5A8 in colon adenocarcinoma [ 7 ]

Location

Body (cg02034204)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.12E+00 Statistic Test p-value: 9.42E-04; Z-score: -1.22E+00

Methylation in Case

5.79E-01 (Median) Methylation in Control 6.50E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Colorectal cancer

         12 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in colorectal cancer [ 8 ]

Location

TSS1500 (cg27645544)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 5.77E-04; Z-score: -3.84E-01

Methylation in Case

7.44E-01 (Median) Methylation in Control 7.70E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC5A8 in colorectal cancer [ 8 ]

Location

TSS1500 (cg05193162)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 8.51E-03; Z-score: -4.93E-01

Methylation in Case

6.24E-01 (Median) Methylation in Control 6.78E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC5A8 in colorectal cancer [ 8 ]

Location

TSS200 (cg13433302)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.30E+00 Statistic Test p-value: 1.26E-06; Z-score: 1.97E+00

Methylation in Case

2.78E-01 (Median) Methylation in Control 2.14E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC5A8 in colorectal cancer [ 8 ]

Location

TSS200 (cg26490054)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.19E+00 Statistic Test p-value: 3.61E-05; Z-score: 7.45E-01

Methylation in Case

8.43E-02 (Median) Methylation in Control 7.11E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC5A8 in colorectal cancer [ 8 ]

Location

TSS200 (cg12135976)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.15E+00 Statistic Test p-value: 1.18E-04; Z-score: 6.89E-01

Methylation in Case

3.25E-01 (Median) Methylation in Control 2.83E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC5A8 in colorectal cancer [ 8 ]

Location

1stExon (cg14730445)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.59E+00 Statistic Test p-value: 1.65E-10; Z-score: 2.97E+00

Methylation in Case

5.07E-01 (Median) Methylation in Control 1.96E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC5A8 in colorectal cancer [ 8 ]

Location

1stExon (cg10141715)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.27E+00 Statistic Test p-value: 2.14E-06; Z-score: 1.32E+00

Methylation in Case

7.17E-01 (Median) Methylation in Control 5.62E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC5A8 in colorectal cancer [ 8 ]

Location

1stExon (cg05063104)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+00 Statistic Test p-value: 2.41E-05; Z-score: 1.25E+00

Methylation in Case

6.52E-01 (Median) Methylation in Control 5.53E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC5A8 in colorectal cancer [ 8 ]

Location

Body (cg16287284)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.08E+00 Statistic Test p-value: 3.51E-03; Z-score: -1.11E+00

Methylation in Case

7.41E-01 (Median) Methylation in Control 8.01E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC5A8 in colorectal cancer [ 8 ]

Location

Body (cg18813959)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 5.12E-03; Z-score: -9.17E-02

Methylation in Case

9.19E-01 (Median) Methylation in Control 9.21E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of SLC5A8 in colorectal cancer [ 8 ]

Location

3'UTR (cg06162589)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.25E+00 Statistic Test p-value: 8.01E-11; Z-score: -3.14E+00

Methylation in Case

5.91E-01 (Median) Methylation in Control 7.36E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Hepatocellular carcinoma

           9 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in hepatocellular carcinoma [ 9 ]

Location

TSS1500 (cg13424870)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.30E+00 Statistic Test p-value: 2.28E-17; Z-score: 2.82E+00

Methylation in Case

4.04E-01 (Median) Methylation in Control 1.76E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC5A8 in hepatocellular carcinoma [ 9 ]

Location

TSS200 (cg12135976)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.40E+00 Statistic Test p-value: 1.34E-05; Z-score: -1.45E+00

Methylation in Case

1.51E-01 (Median) Methylation in Control 2.11E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC5A8 in hepatocellular carcinoma [ 9 ]

Location

1stExon (cg05063104)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.27E+00 Statistic Test p-value: 5.09E-04; Z-score: -1.53E+00

Methylation in Case

2.09E-01 (Median) Methylation in Control 2.65E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC5A8 in hepatocellular carcinoma [ 9 ]

Location

1stExon (cg10141715)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.21E+00 Statistic Test p-value: 4.04E-03; Z-score: 1.18E+00

Methylation in Case

2.97E-01 (Median) Methylation in Control 2.45E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC5A8 in hepatocellular carcinoma [ 9 ]

Location

Body (cg09455805)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.47E+00 Statistic Test p-value: 3.80E-20; Z-score: -2.13E+00

Methylation in Case

5.04E-01 (Median) Methylation in Control 7.40E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC5A8 in hepatocellular carcinoma [ 9 ]

Location

Body (cg07878951)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.44E+00 Statistic Test p-value: 1.82E-14; Z-score: -6.91E+00

Methylation in Case

5.16E-01 (Median) Methylation in Control 7.40E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC5A8 in hepatocellular carcinoma [ 9 ]

Location

Body (cg08362628)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.29E+00 Statistic Test p-value: 6.64E-13; Z-score: -5.68E+00

Methylation in Case

6.12E-01 (Median) Methylation in Control 7.92E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC5A8 in hepatocellular carcinoma [ 9 ]

Location

Body (cg17806661)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.52E+00 Statistic Test p-value: 1.49E-12; Z-score: -2.04E+00

Methylation in Case

2.73E-01 (Median) Methylation in Control 4.15E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC5A8 in hepatocellular carcinoma [ 9 ]

Location

Body (cg16005224)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.26E+00 Statistic Test p-value: 1.56E-04; Z-score: -2.16E+00

Methylation in Case

3.08E-01 (Median) Methylation in Control 3.89E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  HIV infection

         11 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in HIV infection [ 10 ]

Location

TSS1500 (cg05193162)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 3.49E-04; Z-score: -8.42E-01

Methylation in Case

8.62E-01 (Median) Methylation in Control 8.94E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC5A8 in HIV infection [ 10 ]

Location

TSS1500 (cg27645544)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 4.60E-02; Z-score: -5.53E-01

Methylation in Case

7.03E-01 (Median) Methylation in Control 7.33E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC5A8 in HIV infection [ 10 ]

Location

TSS200 (cg26490054)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.54E+00 Statistic Test p-value: 4.60E-06; Z-score: 1.32E+00

Methylation in Case

1.23E-01 (Median) Methylation in Control 7.99E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC5A8 in HIV infection [ 10 ]

Location

TSS200 (cg13433302)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.28E+00 Statistic Test p-value: 1.13E-04; Z-score: 1.07E+00

Methylation in Case

2.05E-01 (Median) Methylation in Control 1.60E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC5A8 in HIV infection [ 10 ]

Location

TSS200 (cg12135976)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.26E+00 Statistic Test p-value: 2.81E-04; Z-score: 1.08E+00

Methylation in Case

3.47E-01 (Median) Methylation in Control 2.75E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC5A8 in HIV infection [ 10 ]

Location

1stExon (cg10141715)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.37E+00 Statistic Test p-value: 5.14E-06; Z-score: 1.88E+00

Methylation in Case

3.26E-01 (Median) Methylation in Control 2.38E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC5A8 in HIV infection [ 10 ]

Location

1stExon (cg14730445)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.04E+00 Statistic Test p-value: 3.63E-05; Z-score: 1.77E+00

Methylation in Case

1.82E-01 (Median) Methylation in Control 8.91E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC5A8 in HIV infection [ 10 ]

Location

1stExon (cg05063104)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.06E+00 Statistic Test p-value: 1.65E-02; Z-score: 3.43E-01

Methylation in Case

3.14E-01 (Median) Methylation in Control 2.96E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC5A8 in HIV infection [ 10 ]

Location

Body (cg16287284)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.07E+00 Statistic Test p-value: 3.78E-02; Z-score: -5.99E-01

Methylation in Case

6.54E-01 (Median) Methylation in Control 7.03E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC5A8 in HIV infection [ 10 ]

Location

Body (cg16005224)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 4.05E-02; Z-score: 4.39E-01

Methylation in Case

4.98E-01 (Median) Methylation in Control 4.67E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of SLC5A8 in HIV infection [ 10 ]

Location

3'UTR (cg06162589)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.14E+00 Statistic Test p-value: 1.17E-04; Z-score: -2.12E+00

Methylation in Case

6.19E-01 (Median) Methylation in Control 7.05E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Pancretic ductal adenocarcinoma

         11 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in pancretic ductal adenocarcinoma [ 11 ]

Location

TSS1500 (cg18143243)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 4.56E+00 Statistic Test p-value: 1.77E-23; Z-score: 4.53E+00

Methylation in Case

4.55E-01 (Median) Methylation in Control 9.98E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC5A8 in pancretic ductal adenocarcinoma [ 11 ]

Location

TSS1500 (cg06794441)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.21E+00 Statistic Test p-value: 1.36E-05; Z-score: 1.23E+00

Methylation in Case

8.54E-01 (Median) Methylation in Control 7.07E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC5A8 in pancretic ductal adenocarcinoma [ 11 ]

Location

TSS1500 (cg21861233)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 7.78E-05; Z-score: -3.92E-01

Methylation in Case

8.05E-01 (Median) Methylation in Control 8.16E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC5A8 in pancretic ductal adenocarcinoma [ 11 ]

Location

TSS1500 (cg21507866)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.06E+00 Statistic Test p-value: 1.21E-03; Z-score: 2.26E-01

Methylation in Case

1.02E-01 (Median) Methylation in Control 9.62E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC5A8 in pancretic ductal adenocarcinoma [ 11 ]

Location

TSS200 (cg04191954)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.28E+00 Statistic Test p-value: 1.93E-08; Z-score: 6.60E-01

Methylation in Case

1.42E-01 (Median) Methylation in Control 1.11E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC5A8 in pancretic ductal adenocarcinoma [ 11 ]

Location

TSS200 (cg06748231)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.08E+00 Statistic Test p-value: 2.08E-04; Z-score: -6.38E-01

Methylation in Case

7.92E-02 (Median) Methylation in Control 8.55E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC5A8 in pancretic ductal adenocarcinoma [ 11 ]

Location

TSS200 (cg23654327)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 4.62E-03; Z-score: -7.89E-01

Methylation in Case

4.14E-02 (Median) Methylation in Control 4.74E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLC5A8 in pancretic ductal adenocarcinoma [ 11 ]

Location

Body (cg02190353)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.54E+00 Statistic Test p-value: 1.02E-20; Z-score: -2.83E+00

Methylation in Case

3.50E-01 (Median) Methylation in Control 5.38E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLC5A8 in pancretic ductal adenocarcinoma [ 11 ]

Location

Body (cg14341131)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.47E+00 Statistic Test p-value: 6.65E-10; Z-score: -2.06E+00

Methylation in Case

4.33E-01 (Median) Methylation in Control 6.36E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLC5A8 in pancretic ductal adenocarcinoma [ 11 ]

Location

Body (cg16548605)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.17E+00 Statistic Test p-value: 1.51E-02; Z-score: 5.73E-01

Methylation in Case

6.24E-01 (Median) Methylation in Control 5.31E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of SLC5A8 in pancretic ductal adenocarcinoma [ 11 ]

Location

Body (cg06556827)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 4.72E-02; Z-score: 5.21E-01

Methylation in Case

8.46E-01 (Median) Methylation in Control 8.23E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Papillary thyroid cancer

           8 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in papillary thyroid cancer [ 12 ]

Location

TSS1500 (cg27645544)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 8.47E-04; Z-score: -8.70E-01

Methylation in Case

7.80E-01 (Median) Methylation in Control 8.22E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC5A8 in papillary thyroid cancer [ 12 ]

Location

TSS1500 (cg26622895)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 2.49E-03; Z-score: -9.28E-01

Methylation in Case

8.60E-01 (Median) Methylation in Control 8.82E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC5A8 in papillary thyroid cancer [ 12 ]

Location

TSS1500 (cg05193162)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 2.83E-03; Z-score: -7.90E-01

Methylation in Case

8.66E-01 (Median) Methylation in Control 8.89E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC5A8 in papillary thyroid cancer [ 12 ]

Location

1stExon (cg10141715)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.16E+00 Statistic Test p-value: 3.02E-02; Z-score: 4.82E-01

Methylation in Case

1.38E-01 (Median) Methylation in Control 1.18E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLC5A8 in papillary thyroid cancer [ 12 ]

Location

Body (cg16287284)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.05E+00 Statistic Test p-value: 3.52E-02; Z-score: 3.80E-01

Methylation in Case

5.56E-01 (Median) Methylation in Control 5.29E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLC5A8 in papillary thyroid cancer [ 12 ]

Location

Body (cg16005224)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.20E+00 Statistic Test p-value: 3.76E-02; Z-score: 1.00E+00

Methylation in Case

4.22E-01 (Median) Methylation in Control 3.53E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLC5A8 in papillary thyroid cancer [ 12 ]

Location

3'UTR (cg06162589)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 2.34E-06; Z-score: -1.13E+00

Methylation in Case

7.60E-01 (Median) Methylation in Control 8.07E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Hypermethylation of SLC5A8 in papillary thyroid cancers [ 18 ]

Epigenetic Type

Methylation Experiment Method Methylation-specific PCR

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Frequency

34 (40%) out of the 86 studied tumor samples

Experimental Material

Patient tissue samples

Additional Notes

The Hypermethylation status of SLC5A8 had been associated with advanced tumors, plurifocality, and extrathyroidal invasion.

  Prostate cancer

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in prostate cancer [ 13 ]

Location

TSS1500 (cg21090344)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.68E+00 Statistic Test p-value: 1.32E-04; Z-score: -5.49E+00

Methylation in Case

3.53E-01 (Median) Methylation in Control 5.93E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Systemic lupus erythematosus

           4 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in systemic lupus erythematosus [ 14 ]

Location

TSS1500 (cg26622895)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 1.12E-02; Z-score: -7.64E-02

Methylation in Case

8.46E-01 (Median) Methylation in Control 8.49E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC5A8 in systemic lupus erythematosus [ 14 ]

Location

TSS1500 (cg27645544)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 4.04E-02; Z-score: -3.59E-02

Methylation in Case

7.28E-01 (Median) Methylation in Control 7.31E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC5A8 in systemic lupus erythematosus [ 14 ]

Location

TSS200 (cg12135976)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.06E+00 Statistic Test p-value: 3.62E-02; Z-score: 3.46E-01

Methylation in Case

3.84E-01 (Median) Methylation in Control 3.61E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC5A8 in systemic lupus erythematosus [ 14 ]

Location

3'UTR (cg06162589)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 4.78E-02; Z-score: -1.50E-01

Methylation in Case

7.03E-01 (Median) Methylation in Control 7.18E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Atypical teratoid rhabdoid tumor

           4 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in atypical teratoid rhabdoid tumor [ 16 ]

Location

1stExon (cg05063104)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.74E+00 Statistic Test p-value: 8.66E-24; Z-score: -3.78E+00

Methylation in Case

4.71E-01 (Median) Methylation in Control 8.19E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLC5A8 in atypical teratoid rhabdoid tumor [ 16 ]

Location

1stExon (cg10141715)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.27E+00 Statistic Test p-value: 3.54E-20; Z-score: -4.62E+00

Methylation in Case

6.91E-01 (Median) Methylation in Control 8.74E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLC5A8 in atypical teratoid rhabdoid tumor [ 16 ]

Location

1stExon (cg14730445)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.32E+00 Statistic Test p-value: 3.99E-19; Z-score: -3.42E+00

Methylation in Case

6.13E-01 (Median) Methylation in Control 8.10E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLC5A8 in atypical teratoid rhabdoid tumor [ 16 ]

Location

3'UTR (cg06162589)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.53E+00 Statistic Test p-value: 1.02E-13; Z-score: 2.48E+00

Methylation in Case

6.02E-01 (Median) Methylation in Control 2.38E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Depression

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLC5A8 in depression [ 17 ]

Location

Body (cg16287284)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 3.26E-02; Z-score: -4.03E-01

Methylation in Case

5.43E-01 (Median) Methylation in Control 5.72E-01 (Median)

Studied Phenotype

Depression [ ICD-11: 6A8Z]

Experimental Material

Patient tissue samples

  Lymphoma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Significant hypermethylation of SLC5A8 in lymphoma than that in healthy individual

Studied Phenotype

Lymphoma [ICD-11:2B30]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 1.07E-26; Fold-change: 0.480638038; Z-score: 2.818004899
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples

microRNA

  Unclear Phenotype

           9 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

miR-200a directly targets SLC5A8 [ 19 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-200a miRNA Mature ID miR-200a-5p

miRNA Sequence

CAUCUUACCGGACAGUGCUGGA

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 2

miR-200b directly targets SLC5A8 [ 19 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-200b miRNA Mature ID miR-200b-5p

miRNA Sequence

CAUCUUACUGGGCAGCAUUGGA

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 3

miR-3151 directly targets SLC5A8 [ 19 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-3151 miRNA Mature ID miR-3151-3p

miRNA Sequence

CCUGAUCCCACAGCCCACCU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 4

miR-3156 directly targets SLC5A8 [ 20 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-3156 miRNA Mature ID miR-3156-5p

miRNA Sequence

AAAGAUCUGGAAGUGGGAGACA

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 5

miR-4305 directly targets SLC5A8 [ 21 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-4305 miRNA Mature ID miR-4305

miRNA Sequence

CCUAGACACCUCCAGUUC

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 6

miR-4777 directly targets SLC5A8 [ 21 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-4777 miRNA Mature ID miR-4777-3p

miRNA Sequence

AUACCUCAUCUAGAAUGCUGUA

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 7

miR-570 directly targets SLC5A8 [ 19 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-570 miRNA Mature ID miR-570-3p

miRNA Sequence

CGAAAACAGCAAUUACCUUUGC

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 8

miR-640 directly targets SLC5A8 [ 19 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-640 miRNA Mature ID miR-640

miRNA Sequence

AUGAUCCAGGAACCUGCCUCU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 9

miR-8485 directly targets SLC5A8 [ 19 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-8485 miRNA Mature ID miR-8485

miRNA Sequence

CACACACACACACACACGUAU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human
References
1 SLC5A8, a sodium transporter, is a tumor suppressor gene silenced by methylation in human colon aberrant crypt foci and cancers. Proc Natl Acad Sci U S A. 2003 Jul 8;100(14):8412-7.
2 Gene silencing of SLC5A8 identified by genome-wide methylation profiling in lung cancer. Lung Cancer. 2013 Mar;79(3):198-204.
3 Prognostic Significance of Aberrant Methylation of Solute Carrier Gene Family 5A8 in Lung Adenocarcinoma. Ann Thorac Surg. 2015 May;99(5):1755-9.
4 DNA Methylation Dynamics in Urological Tumors.
5 Genome-wide Scan for Methylation Profiles in Breast Cancer
6 A CpG-methylation-based assay to predict survival in clear cell renal cell carcinoma. Nat Commun. 2015 Oct 30;6:8699.
7 Genome-scale analysis of DNA methylation in colorectal cancer using Infinium HumanMethylation450 BeadChips. Epigenetics. 2013 Sep;8(9):921-34.
8 Differences in DNA methylation signatures reveal multiple pathways of progression from adenoma to colorectal cancer. Gastroenterology. 2014 Aug;147(2):418-29.e8.
9 Exploring genome-wide DNA methylation profiles altered in hepatocellular carcinoma using Infinium HumanMethylation 450 BeadChips. Epigenetics. 2013 Jan;8(1):34-43.
10 HIV-1 Infection Accelerates Age According to the Epigenetic Clock. J Infect Dis. 2015 Nov 15;212(10):1563-73.
11 Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling. Int J Cancer. 2014 Sep 1;135(5):1110-8.
12 Prognostic Classifier Based on Genome-Wide DNA Methylation Profiling in Well-Differentiated Thyroid Tumors. J Clin Endocrinol Metab. 2017 Nov 1;102(11):4089-4099.
13 Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array. BMC Genomics. 2014 Jan 22;15:51.
14 Genome-wide DNA methylation analysis of systemic lupus erythematosus reveals persistent hypomethylation of interferon genes and compositional changes to CD4+ T-cell populations. PLoS Genet. 2013;9(8):e1003678.
15 DNA methylation analysis of lung adenocarcinoma and adjacent non-tumor tissues
16 Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes. Cancer Cell. 2016 Mar 14;29(3):379-393.
17 DNA methylation and inflammation marker profiles associated with a history of depression. Hum Mol Genet. 2018 Aug 15;27(16):2840-2850.
18 Circulating cell-free DNA, SLC5A8 and SLC26A4 hypermethylation, BRAF(V600E): A non-invasive tool panel for early detection of thyroid cancer. Biomed Pharmacother. 2013 Oct;67(8):723-30.
19 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates. Genes Dev. 2013 Jul 15;27(14):1624-32.
20 Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response. Genes Dev. 2011 Oct 15;25(20):2173-86.
21 Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP. Cell. 2010 Apr 2;141(1):129-41.

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