General Information of Drug Transporter (DT)
DT ID DTD0503 Transporter Info
Gene Name SLCO4C1
Transporter Name Organic anion transporting polypeptide 4C1
Gene ID
353189
UniProt ID
Q6ZQN7
Epigenetic Regulations of This DT (EGR)

Methylation

  Pancretic ductal adenocarcinoma

           9 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in pancretic ductal adenocarcinoma [ 1 ]

Location

5'UTR (cg03721454)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 6.36E-03; Z-score: 4.25E-01

Methylation in Case

7.18E-01 (Median) Methylation in Control 6.91E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLCO4C1 in pancretic ductal adenocarcinoma [ 1 ]

Location

TSS1500 (cg14482308)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.54E+00 Statistic Test p-value: 2.66E-14; Z-score: 2.24E+00

Methylation in Case

4.32E-01 (Median) Methylation in Control 2.80E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLCO4C1 in pancretic ductal adenocarcinoma [ 1 ]

Location

TSS1500 (cg26360695)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.19E+00 Statistic Test p-value: 3.39E-03; Z-score: -8.12E-01

Methylation in Case

1.16E-01 (Median) Methylation in Control 1.39E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLCO4C1 in pancretic ductal adenocarcinoma [ 1 ]

Location

TSS1500 (cg23375719)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.19E+00 Statistic Test p-value: 6.26E-03; Z-score: -4.47E-01

Methylation in Case

1.17E-01 (Median) Methylation in Control 1.39E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLCO4C1 in pancretic ductal adenocarcinoma [ 1 ]

Location

Body (cg17221813)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 3.56E-04; Z-score: 8.90E-01

Methylation in Case

7.88E-01 (Median) Methylation in Control 7.29E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLCO4C1 in pancretic ductal adenocarcinoma [ 1 ]

Location

Body (cg10117207)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+00 Statistic Test p-value: 1.17E-03; Z-score: 1.09E+00

Methylation in Case

8.56E-01 (Median) Methylation in Control 7.28E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLCO4C1 in pancretic ductal adenocarcinoma [ 1 ]

Location

Body (cg04070804)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 4.54E-03; Z-score: 9.05E-01

Methylation in Case

8.74E-01 (Median) Methylation in Control 8.44E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLCO4C1 in pancretic ductal adenocarcinoma [ 1 ]

Location

Body (cg18312989)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.07E+00 Statistic Test p-value: 1.27E-02; Z-score: -6.01E-01

Methylation in Case

5.07E-01 (Median) Methylation in Control 5.45E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLCO4C1 in pancretic ductal adenocarcinoma [ 1 ]

Location

3'UTR (cg14022794)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.10E+00 Statistic Test p-value: 9.93E-04; Z-score: -9.85E-01

Methylation in Case

3.45E-01 (Median) Methylation in Control 3.80E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Bladder cancer

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in bladder cancer [ 2 ]

Location

TSS1500 (cg12864568)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.36E+00 Statistic Test p-value: 2.76E-06; Z-score: -5.46E+00

Methylation in Case

1.13E-01 (Median) Methylation in Control 2.67E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLCO4C1 in bladder cancer [ 2 ]

Location

TSS1500 (cg24036612)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 2.72E-03; Z-score: -4.69E+00

Methylation in Case

8.20E-01 (Median) Methylation in Control 8.65E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLCO4C1 in bladder cancer [ 2 ]

Location

TSS1500 (cg19774478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.86E+00 Statistic Test p-value: 1.24E-02; Z-score: -2.34E+00

Methylation in Case

7.08E-02 (Median) Methylation in Control 1.32E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Breast cancer

           9 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in breast cancer [ 3 ]

Location

TSS1500 (cg19774478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 2.83E-03; Z-score: -2.13E-02

Methylation in Case

7.56E-02 (Median) Methylation in Control 7.62E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLCO4C1 in breast cancer [ 3 ]

Location

TSS1500 (cg24036612)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 3.08E-02; Z-score: -7.04E-01

Methylation in Case

8.44E-01 (Median) Methylation in Control 8.69E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLCO4C1 in breast cancer [ 3 ]

Location

TSS200 (cg19788741)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 5.54E-03; Z-score: -1.40E-01

Methylation in Case

3.24E-02 (Median) Methylation in Control 3.53E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLCO4C1 in breast cancer [ 3 ]

Location

TSS200 (cg11267955)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.12E+00 Statistic Test p-value: 6.44E-03; Z-score: -4.26E-01

Methylation in Case

5.47E-02 (Median) Methylation in Control 6.15E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLCO4C1 in breast cancer [ 3 ]

Location

TSS200 (cg04633600)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.11E+00 Statistic Test p-value: 1.58E-02; Z-score: 3.03E-01

Methylation in Case

4.91E-02 (Median) Methylation in Control 4.41E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLCO4C1 in breast cancer [ 3 ]

Location

TSS200 (cg04621020)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 2.01E-02; Z-score: -4.02E-01

Methylation in Case

5.96E-02 (Median) Methylation in Control 6.52E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLCO4C1 in breast cancer [ 3 ]

Location

TSS200 (cg06480736)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 2.01E-02; Z-score: -2.38E-01

Methylation in Case

6.40E-02 (Median) Methylation in Control 6.79E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLCO4C1 in breast cancer [ 3 ]

Location

Body (cg23318786)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.10E+00 Statistic Test p-value: 1.39E-02; Z-score: 2.18E-01

Methylation in Case

2.73E-02 (Median) Methylation in Control 2.49E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLCO4C1 in breast cancer [ 3 ]

Location

3'UTR (cg00630480)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.09E+00 Statistic Test p-value: 7.63E-07; Z-score: 9.00E-01

Methylation in Case

6.03E-01 (Median) Methylation in Control 5.52E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Renal cell carcinoma

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in clear cell renal cell carcinoma [ 4 ]

Location

TSS1500 (cg12864568)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.66E+00 Statistic Test p-value: 3.80E-02; Z-score: -1.81E+00

Methylation in Case

1.15E-01 (Median) Methylation in Control 1.91E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLCO4C1 in clear cell renal cell carcinoma [ 4 ]

Location

TSS200 (cg22149516)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.46E+00 Statistic Test p-value: 1.17E-02; Z-score: -1.17E+00

Methylation in Case

6.30E-02 (Median) Methylation in Control 9.18E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLCO4C1 in clear cell renal cell carcinoma [ 4 ]

Location

Body (cg23318786)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 1.17E-03; Z-score: 3.23E-01

Methylation in Case

1.82E-02 (Median) Methylation in Control 1.74E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Colon cancer

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in colon adenocarcinoma [ 5 ]

Location

TSS1500 (cg03586474)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.77E+00 Statistic Test p-value: 1.80E-03; Z-score: 3.56E+00

Methylation in Case

2.33E-01 (Median) Methylation in Control 1.32E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLCO4C1 in colon adenocarcinoma [ 5 ]

Location

Body (cg03366891)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.10E+00 Statistic Test p-value: 2.16E-04; Z-score: -3.03E+00

Methylation in Case

7.22E-01 (Median) Methylation in Control 7.96E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Colorectal cancer

         13 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in colorectal cancer [ 6 ]

Location

TSS1500 (cg19774478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.33E+00 Statistic Test p-value: 3.68E-05; Z-score: 1.02E+00

Methylation in Case

2.53E-01 (Median) Methylation in Control 1.91E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLCO4C1 in colorectal cancer [ 6 ]

Location

TSS1500 (cg12864568)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.56E+00 Statistic Test p-value: 1.26E-04; Z-score: 1.62E+00

Methylation in Case

4.54E-01 (Median) Methylation in Control 2.91E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLCO4C1 in colorectal cancer [ 6 ]

Location

TSS200 (cg04621020)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 5.44E+00 Statistic Test p-value: 4.80E-13; Z-score: 6.66E+00

Methylation in Case

5.50E-01 (Median) Methylation in Control 1.01E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLCO4C1 in colorectal cancer [ 6 ]

Location

TSS200 (cg06480736)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 6.46E+00 Statistic Test p-value: 2.11E-12; Z-score: 7.33E+00

Methylation in Case

3.71E-01 (Median) Methylation in Control 5.74E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLCO4C1 in colorectal cancer [ 6 ]

Location

TSS200 (cg11267955)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 8.40E+00 Statistic Test p-value: 3.88E-12; Z-score: 7.65E+00

Methylation in Case

4.00E-01 (Median) Methylation in Control 4.76E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLCO4C1 in colorectal cancer [ 6 ]

Location

TSS200 (cg19788741)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+01 Statistic Test p-value: 4.49E-12; Z-score: 6.05E+00

Methylation in Case

4.42E-01 (Median) Methylation in Control 3.73E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLCO4C1 in colorectal cancer [ 6 ]

Location

TSS200 (cg22149516)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 3.42E+00 Statistic Test p-value: 4.74E-12; Z-score: 4.35E+00

Methylation in Case

5.86E-01 (Median) Methylation in Control 1.71E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLCO4C1 in colorectal cancer [ 6 ]

Location

TSS200 (cg11009817)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 3.59E+00 Statistic Test p-value: 1.05E-11; Z-score: 5.09E+00

Methylation in Case

4.04E-01 (Median) Methylation in Control 1.12E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLCO4C1 in colorectal cancer [ 6 ]

Location

TSS200 (cg04633600)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 4.17E+00 Statistic Test p-value: 2.90E-10; Z-score: 6.04E+00

Methylation in Case

2.08E-01 (Median) Methylation in Control 5.00E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of SLCO4C1 in colorectal cancer [ 6 ]

Location

1stExon (cg00056676)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.44E+00 Statistic Test p-value: 2.86E-08; Z-score: 2.44E+00

Methylation in Case

1.69E-01 (Median) Methylation in Control 1.17E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of SLCO4C1 in colorectal cancer [ 6 ]

Location

Body (cg23318786)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.37E+00 Statistic Test p-value: 1.46E-08; Z-score: 5.96E+00

Methylation in Case

4.58E-02 (Median) Methylation in Control 1.93E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of SLCO4C1 in colorectal cancer [ 6 ]

Location

3'UTR (cg00630480)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 8.49E-05; Z-score: -1.23E+00

Methylation in Case

7.04E-01 (Median) Methylation in Control 7.47E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Hepatocellular carcinoma

           9 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in hepatocellular carcinoma [ 7 ]

Location

TSS1500 (cg19774478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.33E+00 Statistic Test p-value: 6.88E-06; Z-score: 1.35E+00

Methylation in Case

1.32E-01 (Median) Methylation in Control 9.96E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLCO4C1 in hepatocellular carcinoma [ 7 ]

Location

TSS1500 (cg24036612)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 4.53E-05; Z-score: -6.01E-01

Methylation in Case

7.70E-01 (Median) Methylation in Control 8.03E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLCO4C1 in hepatocellular carcinoma [ 7 ]

Location

TSS200 (cg11267955)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 3.01E+00 Statistic Test p-value: 3.07E-09; Z-score: 4.29E+00

Methylation in Case

1.58E-01 (Median) Methylation in Control 5.25E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLCO4C1 in hepatocellular carcinoma [ 7 ]

Location

TSS200 (cg04621020)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.43E+00 Statistic Test p-value: 5.14E-09; Z-score: 5.54E+00

Methylation in Case

1.60E-01 (Median) Methylation in Control 6.57E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLCO4C1 in hepatocellular carcinoma [ 7 ]

Location

TSS200 (cg06480736)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.91E+00 Statistic Test p-value: 6.97E-09; Z-score: 2.44E+00

Methylation in Case

1.33E-01 (Median) Methylation in Control 6.97E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLCO4C1 in hepatocellular carcinoma [ 7 ]

Location

TSS200 (cg11009817)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.64E+00 Statistic Test p-value: 2.20E-07; Z-score: 3.38E+00

Methylation in Case

1.03E-01 (Median) Methylation in Control 6.31E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLCO4C1 in hepatocellular carcinoma [ 7 ]

Location

TSS200 (cg04633600)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.26E+00 Statistic Test p-value: 2.35E-06; Z-score: 6.92E-01

Methylation in Case

6.60E-02 (Median) Methylation in Control 5.24E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of SLCO4C1 in hepatocellular carcinoma [ 7 ]

Location

1stExon (cg00056676)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 2.74E-02; Z-score: 1.70E-01

Methylation in Case

8.40E-02 (Median) Methylation in Control 8.17E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of SLCO4C1 in hepatocellular carcinoma [ 7 ]

Location

Body (cg09647867)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.36E+00 Statistic Test p-value: 3.68E-15; Z-score: -4.63E+00

Methylation in Case

4.92E-01 (Median) Methylation in Control 6.69E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  HIV infection

           7 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in HIV infection [ 8 ]

Location

TSS1500 (cg19774478)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.18E+00 Statistic Test p-value: 4.15E-03; Z-score: 6.51E-01

Methylation in Case

5.83E-02 (Median) Methylation in Control 4.95E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLCO4C1 in HIV infection [ 8 ]

Location

TSS1500 (cg12864568)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.32E+00 Statistic Test p-value: 1.88E-02; Z-score: 1.07E+00

Methylation in Case

8.71E-02 (Median) Methylation in Control 6.59E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLCO4C1 in HIV infection [ 8 ]

Location

TSS200 (cg19788741)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.32E+00 Statistic Test p-value: 4.15E-03; Z-score: 1.06E+00

Methylation in Case

2.92E-02 (Median) Methylation in Control 2.20E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of SLCO4C1 in HIV infection [ 8 ]

Location

TSS200 (cg11009817)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 2.66E-02; Z-score: 3.03E-01

Methylation in Case

4.28E-02 (Median) Methylation in Control 4.00E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of SLCO4C1 in HIV infection [ 8 ]

Location

TSS200 (cg06480736)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.12E+00 Statistic Test p-value: 4.39E-02; Z-score: 4.27E-01

Methylation in Case

5.19E-02 (Median) Methylation in Control 4.64E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of SLCO4C1 in HIV infection [ 8 ]

Location

TSS200 (cg04633600)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.12E+00 Statistic Test p-value: 4.62E-02; Z-score: 5.51E-01

Methylation in Case

8.50E-02 (Median) Methylation in Control 7.62E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of SLCO4C1 in HIV infection [ 8 ]

Location

Body (cg23318786)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.40E+00 Statistic Test p-value: 2.49E-03; Z-score: 6.90E-01

Methylation in Case

1.99E-02 (Median) Methylation in Control 1.42E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Papillary thyroid cancer

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in papillary thyroid cancer [ 9 ]

Location

TSS1500 (cg24036612)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 2.27E-04; Z-score: -7.93E-01

Methylation in Case

8.59E-01 (Median) Methylation in Control 8.76E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLCO4C1 in papillary thyroid cancer [ 9 ]

Location

TSS200 (cg11009817)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.26E+00 Statistic Test p-value: 4.73E-02; Z-score: -1.03E+00

Methylation in Case

6.82E-02 (Median) Methylation in Control 8.58E-02 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLCO4C1 in papillary thyroid cancer [ 9 ]

Location

Body (cg23318786)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 8.47E-03; Z-score: 2.63E-01

Methylation in Case

5.49E-02 (Median) Methylation in Control 5.30E-02 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Prostate cancer

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in prostate cancer [ 10 ]

Location

TSS1500 (cg27365825)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 3.05E+00 Statistic Test p-value: 3.12E-04; Z-score: 1.13E+01

Methylation in Case

6.29E-01 (Median) Methylation in Control 2.06E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Moderate hypermethylation of SLCO4C1 in prostate cancer than that in healthy individual

Studied Phenotype

Prostate cancer [ICD-11:2C82]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 3.84E-29; Fold-change: 0.221026205; Z-score: 10.80695502
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples

  Lung adenocarcinoma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in lung adenocarcinoma [ 11 ]

Location

TSS200 (cg11009817)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.28E+00 Statistic Test p-value: 1.02E-02; Z-score: -1.76E+00

Methylation in Case

9.22E-02 (Median) Methylation in Control 1.18E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Systemic lupus erythematosus

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in systemic lupus erythematosus [ 12 ]

Location

TSS200 (cg19788741)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.05E+00 Statistic Test p-value: 3.82E-03; Z-score: 1.68E-01

Methylation in Case

2.67E-02 (Median) Methylation in Control 2.54E-02 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLCO4C1 in systemic lupus erythematosus [ 12 ]

Location

TSS200 (cg06480736)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.04E+00 Statistic Test p-value: 5.84E-03; Z-score: 1.68E-01

Methylation in Case

5.73E-02 (Median) Methylation in Control 5.52E-02 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of SLCO4C1 in systemic lupus erythematosus [ 12 ]

Location

3'UTR (cg00630480)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 2.28E-02; Z-score: -5.57E-02

Methylation in Case

8.32E-01 (Median) Methylation in Control 8.35E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Atypical teratoid rhabdoid tumor

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in atypical teratoid rhabdoid tumor [ 13 ]

Location

1stExon (cg00056676)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.70E+00 Statistic Test p-value: 3.86E-42; Z-score: -6.50E+00

Methylation in Case

2.99E-01 (Median) Methylation in Control 8.07E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLCO4C1 in atypical teratoid rhabdoid tumor [ 13 ]

Location

3'UTR (cg00630480)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.14E+00 Statistic Test p-value: 1.15E-15; Z-score: -2.99E+00

Methylation in Case

7.78E-01 (Median) Methylation in Control 8.89E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Panic disorder

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of SLCO4C1 in panic disorder [ 14 ]

Location

Body (cg23318786)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -9.92E-01 Statistic Test p-value: 2.58E-02; Z-score: -2.31E-01

Methylation in Case

-5.48E+00 (Median) Methylation in Control -5.43E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of SLCO4C1 in panic disorder [ 14 ]

Location

3'UTR (cg00630480)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.68E+00 Statistic Test p-value: 2.54E-06; Z-score: -8.11E-01

Methylation in Case

5.29E-01 (Median) Methylation in Control 8.88E-01 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Glioblastoma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Significant hypermethylation of SLCO4C1 in glioblastoma than that in healthy individual

Studied Phenotype

Glioblastoma [ICD-11:2A00.00]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 2.03E-09; Fold-change: 0.481928989; Z-score: 2.094793725
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples

  Lymphoma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Significant hypermethylation of SLCO4C1 in lymphoma than that in healthy individual

Studied Phenotype

Lymphoma [ICD-11:2B30]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 4.10E-12; Fold-change: 0.469252292; Z-score: 2.714278546
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples

  Malignant astrocytoma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Significant hypermethylation of SLCO4C1 in malignant astrocytoma than that in healthy individual

Studied Phenotype

Malignant astrocytoma [ICD-11:2A00.12]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 1.53E-64; Fold-change: 0.448187519; Z-score: 3.221077222
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples

  Multilayered rosettes embryonal tumour

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Significant hypermethylation of SLCO4C1 in multilayered rosettes embryonal tumour than that in healthy individual

Studied Phenotype

Multilayered rosettes embryonal tumour [ICD-11:2A00.1]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 4.00E-31; Fold-change: 0.725989969; Z-score: 4.631156229
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples

  Oligodendroglial tumour

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Significant hypermethylation of SLCO4C1 in oligodendroglial tumour than that in healthy individual

Studied Phenotype

Oligodendroglial tumour [ICD-11:2A00.Y1]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 2.04E-08; Fold-change: 0.333051983; Z-score: 6.95185281
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples

  Oligodendroglioma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Significant hypermethylation of SLCO4C1 in oligodendroglioma than that in healthy individual

Studied Phenotype

Oligodendroglioma [ICD-11:2A00.0Y]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 6.00E-25; Fold-change: 0.402987977; Z-score: 2.33098834
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples

  Prostate cancer metastasis

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Significant hypermethylation of SLCO4C1 in prostate cancer metastasis than that in healthy individual

Studied Phenotype

Prostate cancer metastasis [ICD-11:2.00E+06]

The Methylation Level of Disease Section Compare with the Healthy Individual

p-value: 3.28E-06; Fold-change: 0.577116201; Z-score: 22.24530136
DT methylation level in the diseased tissue of patients
DT methylation level in the normal tissue of healthy individuals
Please Click the above Thumbnail to View/Download
the Methylation Barchart for All Samples

microRNA

  Unclear Phenotype

         25 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

miR-518f directly targets SLCO4C1 [ 15 ]

Epigenetic Type

microRNA Experiment Method Microarray

Related Molecular Changes

Down regulation of SLCO4C1 Experiment Method qRT-PCR

miRNA Stemloop ID

miR-518f miRNA Mature ID miR-518f-3p

miRNA Sequence

GAAAGCGCUUCUCUUUAGAGG

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

Additional Notes

SLCO4C1 the predicted target of miR 518f-3p was determined in cell lysates of PBMCs infected with HIV-1 or HIV-2.

  Epigenetic Phenomenon 2

miR-1185 directly targets SLCO4C1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-1185 miRNA Mature ID miR-1185-5p

miRNA Sequence

AGAGGAUACCCUUUGUAUGUU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 3

miR-1224 directly targets SLCO4C1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-1224 miRNA Mature ID miR-1224-5p

miRNA Sequence

GUGAGGACUCGGGAGGUGG

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 4

miR-124 directly targets SLCO4C1 [ 17 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-124 miRNA Mature ID miR-124-5p

miRNA Sequence

CGUGUUCACAGCGGACCUUGAU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 5

miR-1264 directly targets SLCO4C1 [ 18 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-1264 miRNA Mature ID miR-1264

miRNA Sequence

CAAGUCUUAUUUGAGCACCUGUU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 6

miR-148b directly targets SLCO4C1 [ 19 ]

Epigenetic Type

microRNA Experiment Method Microarray

miRNA Stemloop ID

miR-148b miRNA Mature ID miR-148b-3p

miRNA Sequence

UCAGUGCAUCACAGAACUUUGU

miRNA Target Type

Direct

Experimental Material

Human cervical cancer cell line (Hela)

  Epigenetic Phenomenon 7

miR-2115 directly targets SLCO4C1 [ 18 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-2115 miRNA Mature ID miR-2115-5p

miRNA Sequence

AGCUUCCAUGACUCCUGAUGGA

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 8

miR-335 directly targets SLCO4C1 [ 20 ]

Epigenetic Type

microRNA Experiment Method Microarray

miRNA Stemloop ID

miR-335 miRNA Mature ID miR-335-5p

miRNA Sequence

UCAAGAGCAAUAACGAAAAAUGU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 9

miR-3605 directly targets SLCO4C1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-3605 miRNA Mature ID miR-3605-5p

miRNA Sequence

UGAGGAUGGAUAGCAAGGAAGCC

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 10

miR-3679 directly targets SLCO4C1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-3679 miRNA Mature ID miR-3679-5p

miRNA Sequence

UGAGGAUAUGGCAGGGAAGGGGA

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 11

miR-3692 directly targets SLCO4C1 [ 18 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-3692 miRNA Mature ID miR-3692-3p

miRNA Sequence

GUUCCACACUGACACUGCAGAAGU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 12

miR-3915 directly targets SLCO4C1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-3915 miRNA Mature ID miR-3915

miRNA Sequence

UUGAGGAAAAGAUGGUCUUAUU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 13

miR-3938 directly targets SLCO4C1 [ 18 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-3938 miRNA Mature ID miR-3938

miRNA Sequence

AAUUCCCUUGUAGAUAACCCGG

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 14

miR-4455 directly targets SLCO4C1 [ 17 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-4455 miRNA Mature ID miR-4455

miRNA Sequence

AGGGUGUGUGUGUUUUU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 15

miR-4689 directly targets SLCO4C1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-4689 miRNA Mature ID miR-4689

miRNA Sequence

UUGAGGAGACAUGGUGGGGGCC

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 16

miR-516a directly targets SLCO4C1 [ 18 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-516a miRNA Mature ID miR-516a-3p

miRNA Sequence

UGCUUCCUUUCAGAGGGU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 17

miR-516b directly targets SLCO4C1 [ 18 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-516b miRNA Mature ID miR-516b-3p

miRNA Sequence

UGCUUCCUUUCAGAGGGU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 18

miR-574 directly targets SLCO4C1 [ 21 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-574 miRNA Mature ID miR-574-5p

miRNA Sequence

UGAGUGUGUGUGUGUGAGUGUGU

miRNA Target Type

Direct

Experimental Material

Left ventricular cardiac tissues of human

  Epigenetic Phenomenon 19

miR-578 directly targets SLCO4C1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-578 miRNA Mature ID miR-578

miRNA Sequence

CUUCUUGUGCUCUAGGAUUGU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 20

miR-615 directly targets SLCO4C1 [ 22 ]

Epigenetic Type

microRNA Experiment Method CLASH

miRNA Stemloop ID

miR-615 miRNA Mature ID miR-615-3p

miRNA Sequence

UCCGAGCCUGGGUCUCCCUCUU

miRNA Target Type

Direct

Experimental Material

Human embryonic kidney 293 cells (HEK293)

  Epigenetic Phenomenon 21

miR-670 directly targets SLCO4C1 [ 18 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-670 miRNA Mature ID miR-670-5p

miRNA Sequence

GUCCCUGAGUGUAUGUGGUG

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 22

miR-6752 directly targets SLCO4C1 [ 18 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-6752 miRNA Mature ID miR-6752-3p

miRNA Sequence

UCCCUGCCCCCAUACUCCCAG

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 23

miR-676 directly targets SLCO4C1 [ 18 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-676 miRNA Mature ID miR-676-5p

miRNA Sequence

UCUUCAACCUCAGGACUUGCA

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 24

miR-6858 directly targets SLCO4C1 [ 16 ]

Epigenetic Type

microRNA Experiment Method PAR-CLIP

miRNA Stemloop ID

miR-6858 miRNA Mature ID miR-6858-5p

miRNA Sequence

GUGAGGAGGGGCUGGCAGGGAC

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 25

miR-7162 directly targets SLCO4C1 [ 18 ]

Epigenetic Type

microRNA Experiment Method HITS-CLIP

miRNA Stemloop ID

miR-7162 miRNA Mature ID miR-7162-5p

miRNA Sequence

UGCUUCCUUUCUCAGCUG

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human
References
1 Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling. Int J Cancer. 2014 Sep 1;135(5):1110-8.
2 DNA Methylation Dynamics in Urological Tumors.
3 Genome-wide Scan for Methylation Profiles in Breast Cancer
4 A CpG-methylation-based assay to predict survival in clear cell renal cell carcinoma. Nat Commun. 2015 Oct 30;6:8699.
5 Genome-scale analysis of DNA methylation in colorectal cancer using Infinium HumanMethylation450 BeadChips. Epigenetics. 2013 Sep;8(9):921-34.
6 Differences in DNA methylation signatures reveal multiple pathways of progression from adenoma to colorectal cancer. Gastroenterology. 2014 Aug;147(2):418-29.e8.
7 Exploring genome-wide DNA methylation profiles altered in hepatocellular carcinoma using Infinium HumanMethylation 450 BeadChips. Epigenetics. 2013 Jan;8(1):34-43.
8 HIV-1 Infection Accelerates Age According to the Epigenetic Clock. J Infect Dis. 2015 Nov 15;212(10):1563-73.
9 Prognostic Classifier Based on Genome-Wide DNA Methylation Profiling in Well-Differentiated Thyroid Tumors. J Clin Endocrinol Metab. 2017 Nov 1;102(11):4089-4099.
10 Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array. BMC Genomics. 2014 Jan 22;15:51.
11 DNA methylation analysis of lung adenocarcinoma and adjacent non-tumor tissues
12 Genome-wide DNA methylation analysis of systemic lupus erythematosus reveals persistent hypomethylation of interferon genes and compositional changes to CD4+ T-cell populations. PLoS Genet. 2013;9(8):e1003678.
13 Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes. Cancer Cell. 2016 Mar 14;29(3):379-393.
14 DNA Methylation signatures in panic disorder. Transl Psychiatry. 2017 Dec 18;7(12):1287.
15 Identification of Host Micro RNAs That Differentiate HIV-1 and HIV-2 Infection Using Genome Expression Profiling Techniques. Viruses. 2016 May 2;8(5).
16 Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines. Cell Host Microbe. 2011 Nov 17;10(5):515-26.
17 A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins. Nat Methods. 2011 May 15;8(7):559-64.
18 Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates. Genes Dev. 2013 Jul 15;27(14):1624-32.
19 MicroRNA targeting specificity in mammals: determinants beyond seed pairing. Mol Cell. 2007 Jul 6;27(1):91-105.
20 Endogenous human microRNAs that suppress breast cancer metastasis. Nature. 2008 Jan 10;451(7175):147-52.
21 Elucidation of transcriptome-wide microRNA binding sites in human cardiac tissues by Ago2 HITS-CLIP. Nucleic Acids Res. 2016 Sep 6;44(15):7120-31.
22 Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding. Cell. 2013 Apr 25;153(3):654-65.

If you find any error in data or bug in web service, please kindly report it to Dr. Yin and Dr. Li.