Modelled Stucture
Method: Homology modeling
Teplate PDB: 5UL7_A; 5ULD_A
Identity: 35.772% ; 34.17%
Minimized Score: -948.261
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0092 Transporter Info | ||||
| Gene Name | SLC13A2 | ||||
| Protein Name | Sodium/dicarboxylate cotransporter 1 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc13a2 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 7JSJ_A Sequence Length: 567 Identity: 53.86% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1355.255 kcal/mol | |||
| Ramachandra Favored |
Poor |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -1.85 ± 0.31 Residues in Favored Region: 534 Ramachandran favored: 94.51% Number of Outliers: 8 Ramachandran outliers: 1.42% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.79 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Slc13a2 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 7JSJ_A Sequence Length: 535 Identity: 54.731% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1255.908 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -1.72 ± 0.33 Residues in Favored Region: 512 Ramachandran favored: 96.06% Number of Outliers: 2 Ramachandran outliers: 0.38% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.79 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
| Oryctolagus cuniculus (Rabbit) | |||||
| Gene Name | SLC13A2 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 7JSJ_A Sequence Length: 546 Identity: 52.347% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1342.497 kcal/mol | |||
| Ramachandra Favored |
Medium |
||||
| QMEANBrane Quality |
Medium |
||||
| Ramachandran Plot |
Ramz Z Score: -1.57 ± 0.32 Residues in Favored Region: 519 Ramachandran favored: 95.40% Number of Outliers: 11 Ramachandran outliers: 2.02% |
||||
| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.79 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
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