Modelled Stucture
Method: Loop building
Teplate PDB: 6GCT_A
Identity: 100%
Minimized Score: -1199.518
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0133 Transporter Info | ||||
| Gene Name | SLC1A5 | ||||
| Protein Name | Alanine/serine/cysteine/threonine transporter 2 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
|
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc1a5 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6GCT_A Sequence Length: 553 Identity: 79.57% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1317.679 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -1.8 ± 0.32 Residues in Favored Region: 525 Ramachandran favored: 95.28% Number of Outliers: 4 Ramachandran outliers: 0.73% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.8 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Oryctolagus cuniculus (Rabbit) | |||||
| Gene Name | SLC1A5 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6GCT_A Sequence Length: 541 Identity: 85.609% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1293.253 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -1.85 ± 0.33 Residues in Favored Region: 528 Ramachandran favored: 97.96% Number of Outliers: 3 Ramachandran outliers: 0.56% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.8 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
| Macaca fascicularis (Cynomolgus monkey) | |||||
| Gene Name | SLC1A5 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6GCT_A Sequence Length: 542 Identity: 97.786% |
||||
| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1312.975 kcal/mol | |||
| Ramachandra Favored |
Medium |
||||
| QMEANBrane Quality |
High |
||||
| Ramachandran Plot |
Ramz Z Score: -0.96 ± 0.32 Residues in Favored Region: 528 Ramachandran favored: 97.78% Number of Outliers: 2 Ramachandran outliers: 0.37% |
||||
| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.8 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
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