Modelled Stucture
Method: Loop building
Teplate PDB: 6CAA_A
Identity: 99.5%
Minimized Score: -1090.347
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0385 Transporter Info | ||||
| Gene Name | SLC4A4 | ||||
| Protein Name | Electrogenic sodium bicarbonate cotransporter 1 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc4a4 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6CAA_A Sequence Length: 1001 Identity: 96.603% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1542.117 kcal/mol | |||
| Ramachandra Favored |
Poor |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -1.68 ± 0.25 Residues in Favored Region: 945 Ramachandran favored: 94.59% Number of Outliers: 6 Ramachandran outliers: 0.60% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.71 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Slc4a4 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6CAA_A Sequence Length: 1001 Identity: 96.204% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1525.934 kcal/mol | |||
| Ramachandra Favored |
Poor |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -1.5 ± 0.25 Residues in Favored Region: 941 Ramachandran favored: 94.19% Number of Outliers: 10 Ramachandran outliers: 1.00% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.71 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
| Oryctolagus cuniculus (Rabbit) | |||||
| Gene Name | SLC4A4 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6CAA_A Sequence Length: 1001 Identity: 96.204% |
||||
| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1504.412 kcal/mol | |||
| Ramachandra Favored |
Poor |
||||
| QMEANBrane Quality |
Medium |
||||
| Ramachandran Plot |
Ramz Z Score: -1.69 ± 0.25 Residues in Favored Region: 939 Ramachandran favored: 93.99% Number of Outliers: 12 Ramachandran outliers: 1.20% |
||||
| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.71 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
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