Modelled Stucture
Method: Homology modeling
Teplate PDB: 4XP9_C
Identity: 47.292%
Minimized Score: -1471.995
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0444 Transporter Info | ||||
| Gene Name | SLC6A12 | ||||
| Protein Name | Na(+)/Cl(-) betaine/GABA transporter | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
|
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc6a12 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 4XPH_A Sequence Length: 542 Identity: 46.125% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1469.447 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -0.96 ± 0.33 Residues in Favored Region: 527 Ramachandran favored: 97.59% Number of Outliers: 1 Ramachandran outliers: 0.19% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.82 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Slc6a12 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 4XPT_A Sequence Length: 542 Identity: 46.691% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1497.535 kcal/mol | |||
| Ramachandra Favored |
Excellent |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -1.16 ± 0.32 Residues in Favored Region: 531 Ramachandran favored: 98.33% Number of Outliers: 3 Ramachandran outliers: 0.56% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.82 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
| Oryctolagus cuniculus (Rabbit) | |||||
| Gene Name | SLC6A12 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 4XPH_A Sequence Length: 542 Identity: 47.243% |
||||
| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1484.52 kcal/mol | |||
| Ramachandra Favored |
Medium |
||||
| QMEANBrane Quality |
High |
||||
| Ramachandran Plot |
Ramz Z Score: -0.92 ± 0.34 Residues in Favored Region: 529 Ramachandran favored: 97.96% Number of Outliers: 4 Ramachandran outliers: 0.74% |
||||
| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.82 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
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