Modelled Stucture
Method: Homology modeling
Teplate PDB: 4XPH_A
Identity: 46.972%
Minimized Score: -1472.193
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0445 Transporter Info | ||||
| Gene Name | SLC6A13 | ||||
| Protein Name | Sodium- and chloride-dependent GABA transporter 2 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc6a13 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 4XPB_A Sequence Length: 543 Identity: 47.89% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1496.765 kcal/mol | |||
| Ramachandra Favored |
Excellent |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -1.21 ± 0.32 Residues in Favored Region: 531 Ramachandran favored: 98.15% Number of Outliers: 3 Ramachandran outliers: 0.55% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.82 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Slc6a13 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 4XPB_A Sequence Length: 543 Identity: 47.706% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1500.175 kcal/mol | |||
| Ramachandra Favored |
Excellent |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -0.95 ± 0.34 Residues in Favored Region: 531 Ramachandran favored: 98.15% Number of Outliers: 1 Ramachandran outliers: 0.18% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.82 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
| Macaca fascicularis (Cynomolgus monkey) | |||||
| Gene Name | SLC6A13 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 4XPH_A Sequence Length: 550 Identity: 46.558% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1455.522 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -0.91 ± 0.33 Residues in Favored Region: 536 Ramachandran favored: 97.81% Number of Outliers: 0 Ramachandran outliers: 0.00% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.82 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
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