Modelled Stucture
Method: Homology modeling
Teplate PDB: 6M17_A
Identity: 41.429%
Minimized Score: -1311.631
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0449 Transporter Info | ||||
| Gene Name | SLC6A17 | ||||
| Protein Name | Sodium-dependent neurotransmitter transporter | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc6a17 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6M17_A Sequence Length: 608 Identity: 41.214% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1324.042 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -1.66 ± 0.3 Residues in Favored Region: 579 Ramachandran favored: 95.54% Number of Outliers: 5 Ramachandran outliers: 0.83% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.78 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Slc6a17 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6M17_A Sequence Length: 608 Identity: 41.214% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1320.75 kcal/mol | |||
| Ramachandra Favored |
Poor |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -1.99 ± 0.31 Residues in Favored Region: 574 Ramachandran favored: 94.72% Number of Outliers: 9 Ramachandran outliers: 1.49% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.78 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
| Bos taurus (Bovine) | |||||
| Gene Name | SLC6A17 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6M17_A Sequence Length: 225 Identity: 53.333% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -431.539 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -1.48 ± 0.52 Residues in Favored Region: 216 Ramachandran favored: 96.86% Number of Outliers: 0 Ramachandran outliers: 0.00% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.78 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
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