Crystal Structure of This DT
Crystallisation Method: EM
Corresponding Chain: A
Sequence Length: 1-630
Detail: Struture Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0456 Transporter Info | ||||
| Gene Name | SLC6A4 | ||||
| Protein Name | Sodium-dependent serotonin transporter | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
|
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc6a4 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6VRH_A Sequence Length: 630 Identity: 92.54% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1661.111 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -0.44 ± 0.32 Residues in Favored Region: 614 Ramachandran favored: 97.77% Number of Outliers: 2 Ramachandran outliers: 0.32% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.81 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Slc6a4 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6VRH_A Sequence Length: 630 Identity: 91.746% |
||||
| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1596.207 kcal/mol | |||
| Ramachandra Favored |
Medium |
||||
| QMEANBrane Quality |
High |
||||
| Ramachandran Plot |
Ramz Z Score: -0.55 ± 0.32 Residues in Favored Region: 608 Ramachandran favored: 96.82% Number of Outliers: 3 Ramachandran outliers: 0.48% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.81 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
| Drosophila melanogaster (Fruit fly) | |||||
| Gene Name | SerT | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6VRH_A Sequence Length: 568 Identity: 55.245% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1486.333 kcal/mol | |||
| Ramachandra Favored |
Medium |
||||
| QMEANBrane Quality |
High |
||||
| Ramachandran Plot |
Ramz Z Score: -0.74 ± 0.33 Residues in Favored Region: 548 Ramachandran favored: 96.82% Number of Outliers: 1 Ramachandran outliers: 0.18% |
||||
| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.81 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
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