Modelled Stucture
Method: Homology modeling
Teplate PDB: 4XPB_A; 6VRH_A
Identity: 46.248% ; 41.791%
Minimized Score: -1433.714
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0457 Transporter Info | ||||
| Gene Name | SLC6A5 | ||||
| Protein Name | Sodium- and chloride-dependent glycine transporter 2 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc6a5 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6ZPL_A Sequence Length: 591 Identity: 49.916% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1485.728 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -1.31 ± 0.32 Residues in Favored Region: 573 Ramachandran favored: 97.28% Number of Outliers: 0 Ramachandran outliers: 0.00% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.8 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Slc6a5 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6ZPL_A Sequence Length: 591 Identity: 49.747% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1538.471 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -0.96 ± 0.33 Residues in Favored Region: 575 Ramachandran favored: 97.62% Number of Outliers: 1 Ramachandran outliers: 0.17% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.8 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Xenopus laevis (African clawed frog) | |||||
| Gene Name | slc6a5 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 4M48_A Sequence Length: 570 Identity: 45.899% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1496.738 kcal/mol | |||
| Ramachandra Favored |
Medium |
||||
| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -1.61 ± 0.31 Residues in Favored Region: 551 Ramachandran favored: 97.01% Number of Outliers: 4 Ramachandran outliers: 0.70% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.8 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
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