General Information of Drug Transporter (DT)
DT ID DTD0520 Transporter Info
Gene Name CACNA1E
Protein Name Voltage-gated calcium channel alpha Cav2.3
Gene ID
777
UniProt ID
Q15878
3D Structure

Modelled Stucture

Method: Homology modeling

Teplate PDB: 6JPA_A

Identity: 48.82%

Minimized Score: -1476.087

Detail: Structure Info

Inter-species Structural Differences (ISD)
Mus musculus (Mouse)
        Gene Name Cacna1e
        UniProt ID
Q61290
        UniProt Entry
CAC1E_MOUSE
        3D Structure

Method: Homology modeling

Teplate PDB: 5GJV_A

Sequence Length: 846

Identity: 45.195%

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        Performance Minimized Score -1347.635 kcal/mol
Ramachandra Favored

Poor

QMEANBrane Quality

Medium

        Ramachandran Plot

Ramz Z Score: -2.03 ± 0.27

Residues in Favored Region: 789

Ramachandran favored: 93.48%

Number of Outliers: 10

Ramachandran outliers: 1.18%

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        Local Quality

QMEANBrane Score: 0.73

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Rattus norvegicus (Rat)
        Gene Name Cacna1e
        UniProt ID
Q07652
        UniProt Entry
CAC1E_RAT
        3D Structure

Method: Homology modeling

Teplate PDB: 5GJV_A

Sequence Length: 868

Identity: 44.593%

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        Performance Minimized Score -1236.48 kcal/mol
Ramachandra Favored

Poor

QMEANBrane Quality

Medium

        Ramachandran Plot

Ramz Z Score: -1.52 ± 0.27

Residues in Favored Region: 809

Ramachandran favored: 93.42%

Number of Outliers: 12

Ramachandran outliers: 1.39%

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        Local Quality

QMEANBrane Score: 0.73

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        Experimental Structures of This Model Oganism
                PDB ID Scanning Method Resolution Expression System Details Ref
                3DVK X-ray 2.3 Å Escherichia coli
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[ 1]
Structure
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Corresponding chain B
Sequence Length 1818-1837 Mutation No
Oryctolagus cuniculus (Rabbit)
        Gene Name CACNA1E
        UniProt ID
Q02343
        UniProt Entry
CAC1E_RABIT
        3D Structure

Method: Homology modeling

Teplate PDB: 5GJV_A

Sequence Length: 761

Identity: 48.087%

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        Performance Minimized Score -1431.605 kcal/mol
Ramachandra Favored

Poor

QMEANBrane Quality

Medium

        Ramachandran Plot

Ramz Z Score: -2.05 ± 0.28

Residues in Favored Region: 711

Ramachandran favored: 93.68%

Number of Outliers: 14

Ramachandran outliers: 1.84%

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        Local Quality

QMEANBrane Score: 0.73

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References
1 Structures of CaV2 Ca2+/CaM-IQ domain complexes reveal binding modes that underlie calcium-dependent inactivation and facilitation. Structure. 2008 Oct 8;16(10):1455-67.

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