Modelled Stucture
Method: Homology modeling
Teplate PDB: 6J8E_A
Identity: 86.203%
Minimized Score: -2972.573
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0526 Transporter Info | ||||
| Gene Name | SCN1A | ||||
| Protein Name | Voltage-gated sodium channel alpha Nav1.1 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Scn1a | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 7DTD_A Sequence Length: 2009 Identity: 98.158% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -2609.844 kcal/mol | |||
| Ramachandra Favored |
Poor |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -1.25 ± 0.17 Residues in Favored Region: 1900 Ramachandran favored: 94.67% Number of Outliers: 28 Ramachandran outliers: 1.40% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.71 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Scn1a | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 7DTD_A Sequence Length: 2009 Identity: 98.158% |
||||
| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -3164.37 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -1.52 ± 0.17 Residues in Favored Region: 1926 Ramachandran favored: 95.96% Number of Outliers: 15 Ramachandran outliers: 0.75% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.71 |
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| Click to Save Local Quality Plot in PNG Format | |||||
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