General Information of Drug Transporter (DT)
DT ID DTD0528 Transporter Info
Gene Name SCN8A
Protein Name Voltage-gated sodium channel alpha Nav1.6
Gene ID
6334
UniProt ID
O95788
3D Structure

Modelled Stucture

Method: Homology modeling

Teplate PDB: 6J8E_A

Identity: 75.025%

Minimized Score: -3266.391

Detail: Structure Info

Inter-species Structural Differences (ISD)
Mus musculus (Mouse)
        Gene Name Scn8a
        UniProt ID
Q9WTU3
        UniProt Entry
SCN8A_MOUSE
        3D Structure

Crystallisation Method: X-ray

Expression System: Escherichia coli

PDB ID: 3WFN

Corresponding Chain: B/C/D/E

Sequence Length: 1893-1914

Click to Save PDB File in PDB Format
Rattus norvegicus (Rat)
        Gene Name Scn8a
        UniProt ID
O88420
        UniProt Entry
SCN8A_RAT
        3D Structure

Method: Homology modeling

Teplate PDB: 6J8E_A

Sequence Length: 1977

Identity: 74.445%

Click to Save PDB File in TXT Format
        Performance Minimized Score -3192.031 kcal/mol
Ramachandra Favored

Medium

QMEANBrane Quality

Medium

        Ramachandran Plot

Ramz Z Score: -1.34 ± 0.17

Residues in Favored Region: 1887

Ramachandran favored: 95.54%

Number of Outliers: 25

Ramachandran outliers: 1.27%

Click to Save Ramachandran Plot in PNG Format
        Local Quality

QMEANBrane Score: 0.73

Click to Save Local Quality Plot in PNG Format

If you find any error in data or bug in web service, please kindly report it to Dr. Yin and Dr. Li.