Detail Information of Mutation-induced Spatial Variation
General Information of Drug Transporter (DT) | |||||
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DT ID | DTD0001 Transporter Info | ||||
Gene Name | ABCC1 | ||||
Transporter Name | Multidrug resistance-associated protein 1 | ||||
Gene ID | |||||
UniProt ID | |||||
Mutation-induced Spatial Variation (MSV) of This DT | |||||
SNP ID | |||||
Variation Type | T/A | ||||
Site of GPD | chr16:16134392 (GRCh38.p12) | ||||
Allele(s) in dbSNP | A>G | ||||
Minor Allele Frequency | N.A. | ||||
GPD Details | GPD Info | ||||
Structure Details | |||||
Modeling Method | Homology modeling | ||||
Template PDB | 6UY0_A | Identity | 90.66% | ||
Model Performance | Minimized Score | -3608.091 kcal/mol | |||
Ramachandra Favored |
Excellent |
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QMEANBrane Quality |
Medium |
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Ramachandran Plot | |||||
Click to Save Ramachandran Plot in PNG Format | |||||
Ramz Z Score | -0.61 ± 0.19 | ||||
Residues in Favored Region | 1503 | Percentage of Favorable Residues | 98.30% | ||
Number of Outliers | 4 | Ramachandran outliers | 0.26% | ||
Local Quality | |||||
Click to Save Local Quality Plot in PNG Format | |||||
QMEANBrane Score | 0.78 | ||||
SNP ID | |||||
Variation Type | G/V | ||||
Site of GPD | chr16:16079375 (GRCh38.p12) | ||||
Allele(s) in dbSNP | G>T | ||||
Minor Allele Frequency | T=0.0154/77 | ||||
GPD Details | GPD Info | ||||
Structure Details | |||||
Modeling Method | Homology modeling | ||||
Template PDB | 6UY0_A | Identity | 90.66% | ||
Model Performance | Minimized Score | -3563.703 kcal/mol | |||
Ramachandra Favored |
Medium |
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QMEANBrane Quality |
Medium |
||||
Ramachandran Plot | |||||
Click to Save Ramachandran Plot in PNG Format | |||||
Ramz Z Score | -0.91 ± 0.19 | ||||
Residues in Favored Region | 1494 | Percentage of Favorable Residues | 97.71% | ||
Number of Outliers | 3 | Ramachandran outliers | 0.20% | ||
Local Quality | |||||
Click to Save Local Quality Plot in PNG Format | |||||
QMEANBrane Score | 0.77 | ||||
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