Detail Information of Mutation-induced Spatial Variation
General Information of Drug Transporter (DT) | |||||
---|---|---|---|---|---|
DT ID | DTD0051 Transporter Info | ||||
Gene Name | ABCB5 | ||||
Transporter Name | ATP-binding cassette sub-family B member 5 | ||||
Gene ID | |||||
UniProt ID | |||||
Mutation-induced Spatial Variation (MSV) of This DT | |||||
SNP ID | |||||
Variation Type | T/N | ||||
Site of GPD | chr7:20643261 (GRCh38.p12) | ||||
Allele(s) in dbSNP | C>T | ||||
Minor Allele Frequency | T=0.0705/353 | ||||
GPD Details | GPD Info | ||||
Structure Details | |||||
Modeling Method | Homology modeling | ||||
Template PDB | 6QEX_A | Identity | 55.788% | ||
Model Performance | Minimized Score | -2868.014 kcal/mol | |||
Ramachandra Favored |
Excellent |
||||
QMEANBrane Quality |
High |
||||
Ramachandran Plot | |||||
Click to Save Ramachandran Plot in PNG Format | |||||
Ramz Z Score | -0.71 ± 0.22 | ||||
Residues in Favored Region | 1201 | Percentage of Favorable Residues | 98.20% | ||
Number of Outliers | 4 | Ramachandran outliers | 0.33% | ||
Local Quality | |||||
Click to Save Local Quality Plot in PNG Format | |||||
QMEANBrane Score | 0.8 | ||||
SNP ID | |||||
Variation Type | T/I | ||||
Site of GPD | chr7:20643261 (GRCh38.p12) | ||||
Allele(s) in dbSNP | C>T | ||||
Minor Allele Frequency | T=0.0705/353 | ||||
GPD Details | GPD Info | ||||
Structure Details | |||||
Modeling Method | Homology modeling | ||||
Template PDB | 6QEX_A | Identity | 55.788% | ||
Model Performance | Minimized Score | -2988.001 kcal/mol | |||
Ramachandra Favored |
Medium |
||||
QMEANBrane Quality |
Medium |
||||
Ramachandran Plot | |||||
Click to Save Ramachandran Plot in PNG Format | |||||
Ramz Z Score | -0.66 ± 0.22 | ||||
Residues in Favored Region | 1198 | Percentage of Favorable Residues | 97.96% | ||
Number of Outliers | 5 | Ramachandran outliers | 0.41% | ||
Local Quality | |||||
Click to Save Local Quality Plot in PNG Format | |||||
QMEANBrane Score | 0.79 | ||||
If you find any error in data or bug in web service, please kindly report it to Dr. Yin and Dr. Li.