Detail Information of Mutation-induced Spatial Variation
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0084 Transporter Info | ||||
| Gene Name | SLC12A3 | ||||
| Transporter Name | Thiazide-sensitive sodium-chloride cotransporter | ||||
| Gene ID | |||||
| UniProt ID | |||||
| Mutation-induced Spatial Variation (MSV) of This DT | |||||
| SNP ID | |||||
| Variation Type | A/D | ||||
| Site of GPD | chr16:56870675 (GRCh38.p12) | ||||
| Allele(s) in dbSNP | C>G | ||||
| Minor Allele Frequency | C=0.0094/47 | ||||
| GPD Details | GPD Info | ||||
| Structure Details | |||||
| Modeling Method | Homology modeling | ||||
| Template PDB | 6NPL_A | Identity | 52.231% | ||
| Model Performance | Minimized Score | -1799.688 kcal/mol | |||
| Ramachandra Favored |
Poor |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Ramz Z Score | -1.59 ± 0.26 | ||||
| Residues in Favored Region | 827 | Percentage of Favorable Residues | 93.66% | ||
| Number of Outliers | 8 | Ramachandran outliers | 0.91% | ||
| Local Quality |
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| Click to Save Local Quality Plot in PNG Format | |||||
| QMEANBrane Score | 0.76 | ||||
| SNP ID | |||||
| Variation Type | A/G | ||||
| Site of GPD | chr16:56870675 (GRCh38.p12) | ||||
| Allele(s) in dbSNP | C>G | ||||
| Minor Allele Frequency | C=0.0094/47 | ||||
| GPD Details | GPD Info | ||||
| Structure Details | |||||
| Modeling Method | Homology modeling | ||||
| Template PDB | 6NPL_A | Identity | 52.231% | ||
| Model Performance | Minimized Score | -1730.908 kcal/mol | |||
| Ramachandra Favored |
Poor |
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| QMEANBrane Quality |
Medium |
||||
| Ramachandran Plot |
|
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Ramz Z Score | -1.4 ± 0.27 | ||||
| Residues in Favored Region | 827 | Percentage of Favorable Residues | 93.66% | ||
| Number of Outliers | 7 | Ramachandran outliers | 0.79% | ||
| Local Quality |
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| Click to Save Local Quality Plot in PNG Format | |||||
| QMEANBrane Score | 0.76 | ||||
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