General Information of Drug Transporter (DT)
DT ID DTD0526 Transporter Info
Gene Name SCN1A
Transporter Name Voltage-gated sodium channel alpha Nav1.1
Gene ID
6323
UniProt ID
P35498
Mutation-induced Spatial Variation (MSV) of This DT
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SNP ID
rs2298771
Variation Type A/P
Site of GPD chr2:166036278 (GRCh38.p12)
Allele(s) in dbSNP C>T
Minor Allele Frequency C=0.2115/1059
GPD Details GPD Info
Structure Details
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Modeling Method Homology modeling
Template PDB 6J8E_A Identity 86.203%
Model Performance Minimized Score -3262.452 kcal/mol
Ramachandra Favored

Poor

QMEANBrane Quality

Medium

Ramachandran Plot
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Ramz Z Score -1.31 ± 0.18
Residues in Favored Region 1903 Percentage of Favorable Residues 94.82%
Number of Outliers 24 Ramachandran outliers 1.20%
Local Quality
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QMEANBrane Score 0.71
Click to Save PDB File in TXT Format
SNP ID
rs2298771
Variation Type A/T
Site of GPD chr2:166036278 (GRCh38.p12)
Allele(s) in dbSNP C>T
Minor Allele Frequency C=0.2115/1059
GPD Details GPD Info
Structure Details
Click to Show/Hide the Details
Modeling Method Homology modeling
Template PDB 6J8E_A Identity 86.253%
Model Performance Minimized Score -3279.657 kcal/mol
Ramachandra Favored

Medium

QMEANBrane Quality

Medium

Ramachandran Plot
Click to Save Ramachandran Plot in PNG Format
Ramz Z Score -1.5 ± 0.17
Residues in Favored Region 1916 Percentage of Favorable Residues 95.47%
Number of Outliers 24 Ramachandran outliers 1.20%
Local Quality
Click to Save Local Quality Plot in PNG Format
QMEANBrane Score 0.71

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