Detail Information of DT Wildtype Structure
| General Information of Drug Transporter (DT) | ||||||
|---|---|---|---|---|---|---|
| DT ID | DTD0052 Transporter Info | |||||
| Gene Name | ABCB6 | |||||
| Transporter Name | ATP-binding cassette sub-family B member 6 | |||||
| Gene ID | ||||||
| UniProt ID | ||||||
| Modelled Structures of This DT | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Detail Information of Structural Model | ||||||
| Method | Loop building | |||||
| Template PDB | 7D7R_A | Identity | 98.807% | |||
| Performance | Minimized Score | -1551.742 kcal/mol | ||||
| Ramachandra Favored |
Excellent |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
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| Click to Save Ramachandran Plot in PNG Format | ||||||
| Ramz Z Score | -0.28 ± 0.3 | |||||
| Residues in Favored Region | 580 | Ramachandran favored | 99.15% | |||
| Number of Outliers | 0 | Ramachandran outliers | 0.00% | |||
| Local Quality |
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| Click to Save Local Quality Plot in PNG Format | ||||||
| QMEANBrane Score | 0.81 | |||||
| AlphaFold Protein Structure Database | ||||||
| SWISS-MODEL Database | ||||||
| Experimental Structures of This DT | ||||||
| PDB ID | Scanning Method | Resolution | Expression System | Details | Ref | |
| 3NH6 | X-ray | 2 Å | Escherichia coli | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A | |||||
| Sequence Length | 558-842 | Mutation | No | |||
| 3NH9 | X-ray | 2.1 Å | Escherichia coli | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A | |||||
| Sequence Length | 558-842 | Mutation | No | |||
| 3NHA | X-ray | 2.1 Å | Escherichia coli | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A | |||||
| Sequence Length | 558-842 | Mutation | No | |||
| 3NHB | X-ray | 2.15 Å | Escherichia coli | [1] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A | |||||
| Sequence Length | 558-842 | Mutation | No | |||
| 7D7N | EM | 5.2 Å | Homo sapiens | [2] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 1-842 | Mutation | No | |||
| 7D7R | EM | 4 Å | Homo sapiens | [2] | ||
| Structure | ||||||
| Click to Save PDB File in TXT Format | ||||||
| Corresponding chain | A/B | |||||
| Sequence Length | 1-842 | Mutation | No | |||
| References | ||||||
| 1 | Structures of the nucleotide-binding domain of the human ABCB6 transporter and its complexes with nucleotides. Acta Crystallogr D Biol Crystallogr. 2010 Sep;66(Pt 9):979-87. | |||||
| 2 | Cryo-electron microscopy structure of human ABCB6 transporter. Protein Sci. 2020 Dec;29(12):2363-2374. | |||||
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