Detail Information of DT Wildtype Structure
General Information of Drug Transporter (DT) | ||||||
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DT ID | DTD0131 Transporter Info | |||||
Gene Name | SLC1A3 | |||||
Transporter Name | Excitatory amino acid transporter 1 | |||||
Gene ID | ||||||
UniProt ID | ||||||
Modelled Structures of This DT | ||||||
Click to Save PDB File in TXT Format | ||||||
Detail Information of Structural Model | ||||||
Method | Loop building | |||||
Template PDB | 5LLU_A | Identity | 73.905% | |||
Performance | Minimized Score | -1189.818 kcal/mol | ||||
Ramachandra Favored |
Medium |
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QMEANBrane Quality |
High |
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Ramachandran Plot | ||||||
Click to Save Ramachandran Plot in PNG Format | ||||||
Ramz Z Score | -1.79 ± 0.33 | |||||
Residues in Favored Region | 456 | Ramachandran favored | 97.02% | |||
Number of Outliers | 2 | Ramachandran outliers | 0.43% | |||
Local Quality | ||||||
Click to Save Local Quality Plot in PNG Format | ||||||
QMEANBrane Score | 0.81 | |||||
AlphaFold Protein Structure Database | ||||||
SWISS-MODEL Database | ||||||
Experimental Structures of This DT | ||||||
PDB ID | Scanning Method | Resolution | Expression System | Details | Ref | |
5LLM | X-ray | 3.25 Å | Homo sapiens | [1] | ||
Structure | ||||||
Click to Save PDB File in TXT Format | ||||||
Corresponding chain | A | |||||
Sequence Length | 1-148; 243-542 | Mutation | Yes | |||
5LLU | X-ray | 3.32 Å | Homo sapiens | [1] | ||
Structure | ||||||
Click to Save PDB File in TXT Format | ||||||
Corresponding chain | A | |||||
Sequence Length | 1-148; 243-542 | Mutation | No | |||
5LM4 | X-ray | 3.1 Å | Homo sapiens | [1] | ||
Structure | ||||||
Click to Save PDB File in TXT Format | ||||||
Corresponding chain | A | |||||
Sequence Length | 1-148; 243-542 | Mutation | Yes | |||
5MJU | X-ray | 3.71 Å | Homo sapiens | [1] | ||
Structure | ||||||
Click to Save PDB File in TXT Format | ||||||
Corresponding chain | A | |||||
Sequence Length | 1-148; 243-542 | Mutation | Yes | |||
References | ||||||
1 | Structure and allosteric inhibition of excitatory amino acid transporter 1. Nature. 2017 Apr 27;544(7651):446-451. | |||||
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