Detail Information of DT Wildtype Structure
General Information of Drug Transporter (DT) | ||||||
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DT ID | DTD0336 Transporter Info | |||||
Gene Name | SLC38A9 | |||||
Transporter Name | Sodium-coupled neutral amino acid transporter 9 | |||||
Gene ID | ||||||
UniProt ID | ||||||
Modelled Structures of This DT | ||||||
Click to Save PDB File in TXT Format | ||||||
Detail Information of Structural Model | ||||||
Method | Homology modeling | |||||
Template PDB | 6C08_C | Identity | 66.32% | |||
Performance | Minimized Score | -385.896 kcal/mol | ||||
Ramachandra Favored |
Poor |
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QMEANBrane Quality |
Medium |
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Ramachandran Plot | ||||||
Click to Save Ramachandran Plot in PNG Format | ||||||
Ramz Z Score | -2.3 ± 0.38 | |||||
Residues in Favored Region | 429 | Ramachandran favored | 89.75% | |||
Number of Outliers | 9 | Ramachandran outliers | 1.88% | |||
Local Quality | ||||||
Click to Save Local Quality Plot in PNG Format | ||||||
QMEANBrane Score | 0.65 | |||||
AlphaFold Protein Structure Database | ||||||
SWISS-MODEL Database | ||||||
Experimental Structures of This DT | ||||||
PDB ID | Scanning Method | Resolution | Expression System | Details | Ref | |
6WJ2 | EM | 3.2 Å | Spodoptera frugiperdaHomo sapiens | [1] | ||
Structure | ||||||
Click to Save PDB File in TXT Format | ||||||
Corresponding chain | H | |||||
Sequence Length | 1-119 | Mutation | Yes | |||
6WJ3 | EM | 3.9 Å | Spodoptera frugiperdaHomo sapiens | [1] | ||
Structure | ||||||
Click to Save PDB File in TXT Format | ||||||
Corresponding chain | H | |||||
Sequence Length | 1-119 | Mutation | Yes | |||
References | ||||||
1 | Structural mechanism for amino acid-dependent Rag GTPase nucleotide state switching by SLC38A9. Nat Struct Mol Biol. 2020 Nov;27(11):1017-1023. | |||||
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