Modelled Stucture
Method: Homology modeling
Teplate PDB: 2XUT_A
Identity: 30.7%
Minimized Score: -615.174
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0022 Transporter Info | ||||
| Gene Name | SLC15A2 | ||||
| Protein Name | Peptide transporter 2 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc15a2 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 2XUT_A Sequence Length: 391 Identity: 32.5% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -610.124 kcal/mol | |||
| Ramachandra Favored |
Poor |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -2.88 ± 0.39 Residues in Favored Region: 363 Ramachandran favored: 93.32% Number of Outliers: 8 Ramachandran outliers: 2.06% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.74 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Slc15a2 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure | |||||
| Click to Save PDB File in PDB Format | |||||
| Experimental Structures of This Model Oganism | |||||
| PDB ID | Scanning Method | Resolution | Expression System | Details | Ref |
| 5A9I | X-ray | 2.84 Å | Escherichia coli | [ 1] | |
| Structure | |||||
| Click to Save PDB File in TXT Format | |||||
| Corresponding chain | A/B/C | ||||
| Sequence Length | 410-601 | Mutation | No | ||
| Oryctolagus cuniculus (Rabbit) | |||||
| Gene Name | SLC15A2 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 2XUT_A Sequence Length: 362 Identity: 31.618% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -529.326 kcal/mol | |||
| Ramachandra Favored |
Poor |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -2.46 ± 0.38 Residues in Favored Region: 337 Ramachandran favored: 93.61% Number of Outliers: 8 Ramachandran outliers: 2.22% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.74 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| References | |||||
| 1 | Crystal Structures of the Extracellular Domain from PepT1 and PepT2 Provide Novel Insights into Mammalian Peptide Transport. Structure. 2015 Oct 6;23(10):1889-1899. | ||||
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