Modelled Stucture
Method: Homology modeling
Teplate PDB: 6QD5_A
Identity: 99.157%
Minimized Score: -1063.343
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0096 Transporter Info | ||||
| Gene Name | SLC14A1 | ||||
| Protein Name | Urea transporter 1 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Slc14a1 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 4EZC_A Sequence Length: 384 Identity: 85.417% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1043.254 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -1 ± 0.38 Residues in Favored Region: 366 Ramachandran favored: 95.81% Number of Outliers: 1 Ramachandran outliers: 0.26% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.83 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| Inter-species Structural Differences (ISD) | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Slc14a1 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 4EZC_A Sequence Length: 384 Identity: 83.073% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -1073.767 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
High |
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| Ramachandran Plot |
Ramz Z Score: -1.29 ± 0.36 Residues in Favored Region: 374 Ramachandran favored: 97.91% Number of Outliers: 0 Ramachandran outliers: 0.00% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.83 |
||||
| Click to Save Local Quality Plot in PNG Format | |||||
| Inter-species Structural Differences (ISD) | |||||
| Bos taurus (Bovine) | |||||
| Gene Name | SLC14A1 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure | |||||
| Click to Save PDB File in PDB Format | |||||
| Experimental Structures of This Model Oganism | |||||
| PDB ID | Scanning Method | Resolution | Expression System | Details | Ref |
| 4EZD | X-ray | 2.5 Å | Spodoptera frugiperda | [ 1] | |
| Structure | |||||
| Click to Save PDB File in TXT Format | |||||
| Corresponding chain | A/B/C | ||||
| Sequence Length | 1-384 | Mutation | No | ||
| References | |||||
| 1 | Structure and permeation mechanism of a mammalian urea transporter. Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11194-9. | ||||
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