Crystal Structure of This DT
Crystallisation Method: EM
Corresponding Chain: A/B/C/D
Sequence Length: 1-390
Detail: Struture Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0511 Transporter Info | ||||
| Gene Name | KCNJ11 | ||||
| Protein Name | ATP-sensitive inward rectifier potassium channel 11 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Mus musculus (Mouse) | |||||
| Gene Name | Kcnj11 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure | |||||
| Click to Save PDB File in PDB Format | |||||
| Experimental Structures of This Model Oganism | |||||
| PDB ID | Scanning Method | Resolution | Expression System | Details | Ref |
| 5YKF | EM | 4.33 Å | Homo sapiens | [ 1] | |
| Structure | |||||
| Click to Save PDB File in TXT Format | |||||
| Corresponding chain | A/C/E/G | ||||
| Sequence Length | 1-390 | Mutation | No | ||
| 5YKG | EM | 4.57 Å | Homo sapiens | [ 1] | |
| Structure | |||||
| Click to Save PDB File in TXT Format | |||||
| Corresponding chain | A/C/E/G | ||||
| Sequence Length | 1-390 | Mutation | No | ||
| 5YW8 | EM | 4.4 Å | Homo sapiens | [ 1] | |
| Structure | |||||
| Click to Save PDB File in TXT Format | |||||
| Corresponding chain | A/C/E/G | ||||
| Sequence Length | 1-390 | Mutation | No | ||
| 5YW9 | EM | 5 Å | Homo sapiens | [ 1] | |
| Structure | |||||
| Click to Save PDB File in TXT Format | |||||
| Corresponding chain | A/C/E/G | ||||
| Sequence Length | 1-390 | Mutation | No | ||
| 5YWA | EM | 6.1 Å | Homo sapiens | [ 1] | |
| Structure | |||||
| Click to Save PDB File in TXT Format | |||||
| Corresponding chain | A/C/E/G | ||||
| Sequence Length | 1-390 | Mutation | No | ||
| 5YWB | EM | 5.2 Å | Homo sapiens | [ 1] | |
| Structure | |||||
| Click to Save PDB File in TXT Format | |||||
| Corresponding chain | A/C/E/G | ||||
| Sequence Length | 1-390 | Mutation | No | ||
| 5YWC | EM | 4.3 Å | Homo sapiens | [ 1] | |
| Structure | |||||
| Click to Save PDB File in TXT Format | |||||
| Corresponding chain | A/C/E/G | ||||
| Sequence Length | 1-390 | Mutation | No | ||
| 5WUA | EM | 5.6 Å | Homo sapiens | [ 2] | |
| Structure | |||||
| Click to Save PDB File in TXT Format | |||||
| Corresponding chain | A/B/C/D | ||||
| Sequence Length | 1-390 | Mutation | No | ||
| Inter-species Structural Differences (ISD) | |||||
| Rattus norvegicus (Rat) | |||||
| Gene Name | Kcnj11 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure | |||||
| Click to Save PDB File in PDB Format | |||||
| Experimental Structures of This Model Oganism | |||||
| PDB ID | Scanning Method | Resolution | Expression System | Details | Ref |
| Inter-species Structural Differences (ISD) | |||||
| Oryctolagus cuniculus (Rabbit) | |||||
| Gene Name | KCNJ11 | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6C3O_A Sequence Length: 390 Identity: 96.667% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -876.017 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: 0.17 ± 0.42 Residues in Favored Region: 377 Ramachandran favored: 97.16% Number of Outliers: 0 Ramachandran outliers: 0.00% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.75 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| References | |||||
| 1 | Ligand binding and conformational changes of SUR1 subunit in pancreatic ATP-sensitive potassium channels. Protein Cell. 2018 Jun;9(6):553-567. | ||||
| 2 | Structure of a Pancreatic ATP-Sensitive Potassium Channel. Cell. 2017 Jan 12;168(1-2):101-110.e10. | ||||
| 3 | The Structural Basis for the Binding of Repaglinide to the Pancreatic K(ATP) Channel. Cell Rep. 2019 May 7;27(6):1848-1857.e4. | ||||
| 4 | Mechanism of pharmacochaperoning in a mammalian K(ATP) channel revealed by cryo-EM. Elife. 2019 Jul 25;8:e46417. | ||||
| 5 | Cryo-EM structure of the ATP-sensitive potassium channel illuminates mechanisms of assembly and gating. Elife. 2017 Jan 16;6:e24149. | ||||
| 6 | Anti-diabetic drug binding site in a mammalian K(ATP) channel revealed by Cryo-EM. Elife. 2017 Oct 24;6:e31054. | ||||
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