Modelled Stucture
Method: Homology modeling
Teplate PDB: 6JPA_A
Identity: 48.763%
Minimized Score: -1470.617
Detail: Structure Info
Detail Information of Inter-species Structural Difference
| General Information of Drug Transporter (DT) | |||||
|---|---|---|---|---|---|
| DT ID | DTD0519 Transporter Info | ||||
| Gene Name | CACNA1B | ||||
| Protein Name | Voltage-gated calcium channel alpha Cav2.2 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| 3D Structure |
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| Inter-species Structural Differences (ISD) | |||||
| Gallus gallus (Chicken) | |||||
| Gene Name | CACNA1B | ||||
| UniProt ID | |||||
| UniProt Entry | |||||
| 3D Structure |
Method: Homology modeling Teplate PDB: 6JPA_A Sequence Length: 154 Identity: 61.146% |
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| Click to Save PDB File in TXT Format | |||||
| Performance | Minimized Score | -366.002 kcal/mol | |||
| Ramachandra Favored |
Medium |
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| QMEANBrane Quality |
Medium |
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| Ramachandran Plot |
Ramz Z Score: -1.76 ± 0.62 Residues in Favored Region: 147 Ramachandran favored: 96.71% Number of Outliers: 0 Ramachandran outliers: 0.00% |
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| Click to Save Ramachandran Plot in PNG Format | |||||
| Local Quality |
QMEANBrane Score: 0.77 |
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| Click to Save Local Quality Plot in PNG Format | |||||
| References | |||||
| 1 | The role of a voltage-dependent Ca2+ channel intracellular linker: a structure-function analysis. J Neurosci. 2012 May 30;32(22):7602-13. | ||||
| 2 | Structures of CaV2 Ca2+/CaM-IQ domain complexes reveal binding modes that underlie calcium-dependent inactivation and facilitation. Structure. 2008 Oct 8;16(10):1455-67. | ||||
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