Detail Information of Transcriptional Regulations

General Information of Drug Transporter (DT)
DT ID DTD0482 Transporter Info
Gene Name SLC9A2
Transporter Name Sodium/hydrogen exchanger 2
Gene ID
6549
UniProt ID
Q9UBY0

Transcriptional Regulation of This DT (TSR)

TF Superclass 1: Basic domains

      Class 1.1: Basic leucine zipper factors

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        CEBPB 

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       Transcriptional Phenomenon 1

 Direct binding to SLC9A2 gene [1]

TF Protein Name

 CCAAT/enhancer-binding protein beta Transcription Factor Info

Tissue

 Blood; Bone marrow; Breast; Cervix; Colon; Lung

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 CCAAT/enhancer-binding protein beta (CEBPB) can directly bind to the SLC9A2 gene, which in turn affects the expression or function of the drug transporter Sodium/hydrogen exchanger 2.

      Class 1.2: Basic helix-loop-helix factors

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        ASCL1 

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       Transcriptional Phenomenon 1

 Direct binding to SLC9A2 gene [2]

TF Protein Name

 Achaete-scute homolog 1 Transcription Factor Info

Tissue

 Lung

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Achaete-scute homolog 1 (ASCL1) can directly bind to the SLC9A2 gene, which in turn affects the expression or function of the drug transporter Sodium/hydrogen exchanger 2.

        TCF3 

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       Transcriptional Phenomenon 1

 Direct binding to SLC9A2 gene [3]

TF Protein Name

 Transcription factor E2-alpha Transcription Factor Info

Tissue

 Blood

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Transcription factor E2-alpha (TCF3) can directly bind to the SLC9A2 gene, which in turn affects the expression or function of the drug transporter Sodium/hydrogen exchanger 2.

TF Superclass 2: Zinc-coordinating DNA-binding domains

      Class 2.3: C2H2 zinc finger factors

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        SP1 

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       Transcriptional Phenomenon 1

 Activation of SLC9A2 gene in colon cancer condition [4]

TF Protein Name

 Transcription factor Sp1 Transcription Factor Info

Studied Phenotype

 Colon cancer [ICD11: 2B90]

Tissue

 Colon

Related DT Changes

 Up regulating

Experimental Material

 Human colon adenocarcinoma cells (C2bbe1)

Detailed Description

 Transcription factor Sp1 (SP1) has been reported to activate the transcription of SLC9A2 gene in colon cancer condition, which leads to an increased expression of the drug transporter Sodium/hydrogen exchanger 2.

        SP3 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Activation of SLC9A2 gene in colon cancer condition [4]

TF Protein Name

 Transcription factor Sp3 Transcription Factor Info

Studied Phenotype

 Colon cancer [ICD11: 2B90]

Tissue

 Colon

Related DT Changes

 Up regulating

Experimental Material

 Human colon adenocarcinoma cells (C2bbe1)

Detailed Description

 Transcription factor Sp3 (SP3) has been reported to activate the transcription of SLC9A2 gene in colon cancer condition, which leads to an increased expression of the drug transporter Sodium/hydrogen exchanger 2.

        ZNF263 

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       Transcriptional Phenomenon 1

 Direct binding to SLC9A2 gene [2]

TF Protein Name

 Zinc finger protein 263 Transcription Factor Info

Tissue

 Bone marrow; Kidney

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Zinc finger protein 263 (ZNF263) can directly bind to the SLC9A2 gene, which in turn affects the expression or function of the drug transporter Sodium/hydrogen exchanger 2.

TF Superclass 3: Helix-turn-helix domains

      Class 3.5: Tryptophan cluster factors

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        SPI1 

Click to Show/Hide to Show 1 Transcriptional Phenomena      

       Transcriptional Phenomenon 1

 Direct binding to SLC9A2 gene [5]

TF Protein Name

 Transcription factor PU.1 Transcription Factor Info

Tissue

 Adrenal gland; Blood; Bone marrow; Brain; Breast; Embryo; Foreskin; Heart; Intestine; Kidney; Lung; Muscle; Penis; Placenta; Renal cortex; Renal pelvis; Skin; Spinal cord; Stomach; Testes; Umbilical cord blood

Related DT Changes

 Direct regulating

Experiment method

 TF-transporter regulations were collected from ChIP-Seq datasets.

Detailed Description

 Transcription factor PU.1 (SPI1) can directly bind to the SLC9A2 gene, which in turn affects the expression or function of the drug transporter Sodium/hydrogen exchanger 2.
References
1 NCBI GEO: archive for functional genomics data sets--update. Nucleic Acids Res. 2013 Jan;41(D1):D991-5.
2 hTFtarget: A Comprehensive Database for Regulations of Human Transcription Factors and Their Targets. Genomics Proteomics Bioinformatics. 2020 Apr;18(2):120-228. (ID:ENSG00000115616)
3 Closure of the NCBI SRA and implications for the long-term future of genomics data storage. Genome Biol. 2011;12(3):402.
4 Sp1 and Sp3 control constitutive expression of the human NHE2 promoter by interactions with the proximal promoter and the transcription initiation site. Biochem J. 2007 Oct 1;407(1):101-11.
5 The Encyclopedia of DNA elements (ENCODE): data portal update. Nucleic Acids Res. 2018 Jan 4;46(D1):D794-D801

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