Modelled DT Structure
Method: homology modeling
Template PDB: 6QEX_A
Identity: 55.788%
Minimized Score: -2936.873 kcal/mol
Detail: Structure Info
| General Information of DT | |||||
|---|---|---|---|---|---|
| DT ID | DTD0051 | ||||
| Gene Name | ABCB5 | ||||
| Protein Name | ATP-binding cassette sub-family B member 5 | ||||
| Gene ID | |||||
| UniProt ID | |||||
| TCDB ID | |||||
| 3D Structure |
Modelled DT Structure Method: homology modeling Template PDB: 6QEX_A Identity: 55.788% Minimized Score: -2936.873 kcal/mol Detail: Structure Info |
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| Synonyms | ABCB5; ABCB5 P-gp; ABCB5alpha; ABCB5beta; EST422562; P-glycoprotein ABCB5 | ||||
| DT Family | ATP-Binding Cassette (ABC) Superfamily | ||||
| Multidrug Resistance Exporter (MDR) Family (ABCB) | |||||
| Tissue Specificity | Expressed by CD133-expressing progenitor cellsamong epidermal melanocytes (at protein level). Widely expressedwith specific expression in pigment cells. Highly expressed inseveral malignant tissues: highly expressed in clinical melanomas,with low expression in normal skin. In melanoma, marks malignantmelanoma-initiating cells (MMIC), in which clinical virulenceresides as a consequence of unlimited self-renewal capacity,resulting in inexorable tumor progression and metastasis. Alsohighly expressed in a number of leukemia cells. Expressed in basallimbal epithelium. | ||||
| Function | This drug efflux transporter present in a number of stem cells that acts as a regulator of cellular differentiation. Able to mediate efflux from cells of the rhodamine dye and of the therapeutic drug doxorubicin. | ||||
| Disease(s) | Non-small cell lung cancer [ICD-11: 2C25] | ||||
| Rheumatoid arthritis [ICD-11: FA20] | |||||
| Variability Data of This Drug Transporter (DT) | |||||
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Regulatory Variability Data of This DT (VARIDT 3.0) |
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(β) Post-translational Modification of This DT |
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(γ) Transcriptional Regulation of This DT |
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(δ) Epigenetic Regulation of This DT |
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(ε) Exogenous Modulation of This DT |
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Structural Variability Data of This DT (VARIDT 2.0) |
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(α) Mutation-induced Structural Variation |
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(β) Inter-species Structural Differences |
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(δ) Xenobiotics-regulated Structural Variability |
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General Variability Data of This DT (VARIDT 1.0) |
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(α) Genetic Polymorphisms of This DT |
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(β) Disease-specific Protein Abundances of This DT |
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| Molecular Transporting Profile of This DT | |||||
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Full List of Drug(s) Transported by This DT |
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Approved Drug |
Click to Show/Hide the Full List of Drug: 3 Drugs in Total | ||||
| Drug Name | Highest Status | Detail | Indication | ICD 11 | Ref |
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Brigatinib
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Approved | Drug Info | Non-small cell lung cancer | 2C25 | [1] |
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Doxorubicin
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Approved | Drug Info | Leukemia | 2A60-2B33 | [2] |
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Fostamatinib
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Approved | Drug Info | Rheumatoid arthritis | FA20 | [3] |
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Endogenous Metabolites (EMs) Handled by This DT |
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Endogenous Metabolites (EMs) |
Click to Show/Hide the Full List of EMs: 4 EMs in Total | ||||
| EM Name | PubChem CID | Detail | Experimental Material | Ref | |
| Glycerophosphocholine | EM Info | Identified using ABCB5 knockdown G3361 melanoma cells | [4] | ||
| Glycerophosphoethanolamine | EM Info | Identified using ABCB5 knockdown G3361 melanoma cells | [4] | ||
| Phospholipid degradation product unspecific | N.A. | EM Info | Identified using ABCB5 knockdown G3361 melanoma cells | [4] | |
| Water-soluble metabolite unspecific | N.A. | EM Info | Identified using ABCB5 knockdown G3361 melanoma cells | [4] | |
| References | |||||
| 1 | NDA/BLA Multidisciplinary Review and Evaluation of ALUNBRIG (brigatinib) From FDA. | ||||
| 2 | ABCB5-mediated doxorubicin transport and chemoresistance in human malignant melanoma. Cancer Res. 2005 May 15;65(10):4320-33. | ||||
| 3 | DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. (ID: DB12010) | ||||
| 4 | Expression of Cell-Surface Marker ABCB5 Causes Characteristic Modifications of Glucose, Amino Acid and Phospholipid Metabolism in the G3361 Melanoma-Initiating Cell Line. PLoS One. 2016 Aug 25;11(8):e0161803. | ||||
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