Endogenous Metabolite (EM) Information
| Endogenous Metabolite (EM) Information | ||||||
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| EM ID |
EM00078
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| EM Name |
Citrulline
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| Synonyms |
L-citrulline; citrulline; H-cit-oh; delta-Ureidonorvaline; Sitrulline; N5-Carbamoyl-L-ornithine; L(+)-citrulline; L-Cytrulline; N5-(Aminocarbonyl)ornithine; N(delta)-Carbamylornithine; Citrulline, L-; alpha-Amino-delta-ureidovaleric acid; (S)-2-Amino-5-ureidopentanoic acid; N5-carbamoylornithine; d-ureidonorvaline; Ornithine, N5-(aminocarbonyl)-; L-2-Amino-5-ureidovaleric acid; L-Ornithine, N5-(aminocarbonyl)-; L-(+)-Citrulline; 2-Amino-5-ureidovaleric acid; L-citrullin; (2S)-2-amino-5-(carbamoylamino)pentanoic acid
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| Structure |
<iframe style="width: 300px; height: 300px;" frameborder="0" src="https://embed.molview.org/v1/?mode=balls&cid=9750"></iframe>
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| 3D MOL | 2D MOL | |||||
| Formula |
C6H13N3O3
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| Canonical SMILES |
C(CC(C(=O)O)N)CNC(=O)N
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| InChI |
InChI=1S/C6H13N3O3/c7-4(5(10)11)2-1-3-9-6(8)12/h4H,1-3,7H2,(H,10,11)(H3,8,9,12)/t4-/m0/s1
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| InChIKey |
RHGKLRLOHDJJDR-BYPYZUCNSA-N
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| CAS Number |
CAS 372-75-8
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| Pharmaceutical Properties | Molecular Weight | 175.19 | Topological Polar Surface Area | 118 | ||
| Heavy Atom Count | 12 | Rotatable Bond Count | 5 | |||
| Hydrogen Bond Donor Count | 4 | Hydrogen Bond Acceptor Count | 4 | |||
| XLogP |
-4.3
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| PubChem CID | ||||||
| ChEBI ID |
CHEBI:16349
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| DT(s) "handling" This EM | GC1 | Transporter Info | Mitochondrial glutamate carrier 1 | [1] | ||
| OAT3 | Transporter Info | Organic anion transporter 3 | [2] | |||
| OCT-2 | Transporter Info | Organic cation transporter 2 | [3] | |||
| References | ||||||
| 1 | LC-MS-based metabolomics revealed SLC25A22 as an essential regulator of aspartate-derived amino acids and polyamines in KRAS-mutant colorectal cancer. Oncotarget. 2017 Sep 20;8(60):101333-101344. | |||||
| 2 | The drug transporter OAT3 (SLC22A8) and endogenous metabolite communication via the gut-liver-kidney axis. J Biol Chem. 2017 Sep 22;292(38):15789-15803. | |||||
| 3 | Pharmacogenetics meets metabolomics: discovery of tryptophan as a new endogenous OCT2 substrate related to metformin disposition. PLoS One. 2012;7(5):e36637. | |||||
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