General Information of Drug Transporter (DT)
DT ID DTD0003 Transporter Info
Gene Name ABCB1
Transporter Name P-glycoprotein 1
Gene ID
5243
UniProt ID
P08183
Epigenetic Regulations of This DT (EGR)

Methylation

  Hematologic malignancies

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypomethylation of ABCB1 in hematologic malignancies [ 1 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Methylation-specific PCR

Related Molecular Changes

Up regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Hematologic malignancies [ ICD-11: 2B33.Y]

Frequency

56% of the studied samples

Experimental Material

Patient tissue samples

Additional Notes

MDR1 promoter Hypomethylation conferred its up-regulation and indicated poor prognosis in patients with and without bone marrow transplantation.

  Invasive ductal breast carcinoma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypomethylation of ABCB1 in invasive ductal breast carcinoma [ 2 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Methylation-specific PCR

Related Molecular Changes

Up regulation of ABCB1 Experiment Method Immunohistochemistry

Studied Phenotype

Invasive ductal breast carcinoma [ ICD-11: 2C61.0]

Frequency

47 (47%) out of the 100 studied tumor samples

Experimental Material

Patient tissue samples

Additional Notes

Breast cancer patients with hypomethylated MDR1 promoter in tumors revealed shorter median overall survival (OS) (median OS = 18 months) as compared to patients having methylated MDR1 promoter.

  Lung adenocarcinoma

           7 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of ABCB1 in lung adenocarcinoma [ 3 ]

Location

Downstream promoter

Epigenetic Type

Methylation Experiment Method Bisulfite sequencing

Related Molecular Changes

Up regulation of ABCB1 Experiment Method Western Blot

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Human lung adenocarcinoma cell line (A549)

Additional Notes

Hypermethylation of the ABCB1 gene correlated with increased ABCB1 gene expression and that increased ABCB1 gene expression and methylation were associated with the acquisition of resistance to the cisplatin analogue.

  Epigenetic Phenomenon 2

Hypermethylation of ABCB1 in lung adenocarcinoma [ 3 ]

Location

Downstream promoter

Epigenetic Type

Methylation Experiment Method Bisulfite sequencing

Related Molecular Changes

Up regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Human lung adenocarcinoma cell line (A549)

Additional Notes

Hypermethylation of the ABCB1 gene correlated with increased ABCB1 gene expression and that increased ABCB1 gene expression and methylation were associated with the acquisition of resistance to the cisplatin analogue.

  Epigenetic Phenomenon 3

Methylation of ABCB1 in lung adenocarcinoma [ 23 ]

Location

5'UTR (cg15759056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.89E+00 Statistic Test p-value: 2.88E-02; Z-score: 4.86E+00

Methylation in Case

8.57E-02 (Median) Methylation in Control 4.54E-02 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCB1 in lung adenocarcinoma [ 23 ]

Location

5'UTR (cg22899422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 3.19E-02; Z-score: -1.46E+00

Methylation in Case

7.95E-01 (Median) Methylation in Control 8.29E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCB1 in lung adenocarcinoma [ 23 ]

Location

5'UTR (cg00862116)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.59E+00 Statistic Test p-value: 3.57E-02; Z-score: 7.32E+00

Methylation in Case

2.08E-01 (Median) Methylation in Control 1.31E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCB1 in lung adenocarcinoma [ 23 ]

Location

5'UTR (cg12270822)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.32E+00 Statistic Test p-value: 3.65E-02; Z-score: 1.85E+00

Methylation in Case

2.59E-01 (Median) Methylation in Control 1.12E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCB1 in lung adenocarcinoma [ 23 ]

Location

5'UTR (cg09105881)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.31E+00 Statistic Test p-value: 4.17E-02; Z-score: 3.36E+00

Methylation in Case

1.85E-01 (Median) Methylation in Control 1.42E-01 (Median)

Studied Phenotype

Lung adenocarcinoma [ ICD-11: 2C25.0]

Experimental Material

Patient tissue samples

  Cervical cancer

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypomethylation of ABCB1 in cervical cancer [ 4 ]

Location

Promoter (13 CpG sites)

Epigenetic Type

Methylation Experiment Method MALDI-TOF MS

Related Molecular Changes

Up regulation of ABCB1 Experiment Method Immunohistochemistry

Studied Phenotype

Cervical cancer [ ICD-11: 2C77.Z]

Experimental Material

Patient tissue samples

Additional Notes

The methylation rate of CpG_2, 3, and 4 loci before chemotherapy in patients with effective chemotherapy was higher than patients with ineffective chemotherapy, and there was no difference in the methylation rate among the other CpG loci (P>0.05).

  Malaria

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypomethylation of ABCB1 in malaria [ 5 ]

Location

Downstream promoter (+245 to +679 bp)

Epigenetic Type

Methylation Experiment Method Bisulfite sequencing

Related Molecular Changes

Up regulation of ABCB1 Experiment Method Western Blot

Studied Phenotype

Malaria [ ICD-11: 1F40]

Experimental Material

Patient tissue samples

Additional Notes

Hypomethylation of downstream promoter region of ABCB1 results higher expression of ABCB1 protein in complicated malarial group.

  Pancreatic cancer

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypomethylation of ABCB1 in pancreatic cancer [ 6 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Bisulfite sequencing

Related Molecular Changes

Up regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Pancreatic cancer [ ICD-11: 2C10]

Experimental Material

Multiple cell lines of human

Additional Notes

ABCB1 expression correlated with pancreatic cancer tumorigenesis and drug resistance in a mechanism that is independent of promoter methylation.

  Adult acute lymphocytic leukemia

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of ABCB1 in adult acute lymphocytic leukemia [ 7 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Methylation-specific PCR

Related Molecular Changes

Down regulation of ABCB1 Experiment Method Immunohistochemistry

Studied Phenotype

Adult acute lymphocytic leukemia [ ICD-11: 2A82]

Frequency

16% of the studied tumor samples

Experimental Material

Patient tissue samples

Additional Notes

There is an excellent correlation between ABCB1 methylation and ABCB1 protein expression.

  Breast cancer

         18 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of ABCB1 in breast cancer [ 8 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Bisulfite sequencing

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Frequency

70% of the studied tumor samples

Experimental Material

Patient tissue samples

Additional Notes

Methylation at the ABCB1 promoter improved overall survival probably due to prolonged availability and activity of the drug in the cell.

  Epigenetic Phenomenon 2

Hypermethylation of ABCB1 in breast cancer [ 9 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Bisulfite pyrosequencing

Related Molecular Changes

Down regulation of ABCB1 Experiment Method Microarrays

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Frequency

>75% of the studied tumor samples

Experimental Material

Patient tissue samples

Additional Notes

The ABCB1 promoter was more frequently methylated in tumor tissues than in tumor-adjacent and tumor-distant tissues.

  Epigenetic Phenomenon 3

Hypermethylation of ABCB1 in breast cancer [ 12 ]

Location

Promoter (-100 to +500 bp)

Epigenetic Type

Methylation Experiment Method Bisulfite sequencing

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Human breast adenocarcinoma cell line (MCF-7)

Additional Notes

ABCB1 promoter Hypermethylation is association with ABCB1 low expression in MCF-7 cell line.

  Epigenetic Phenomenon 4

Methylation of ABCB1 in breast cancer [ 17 ]

Location

5'UTR (cg12270822)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.42E+00 Statistic Test p-value: 4.58E-09; Z-score: 1.28E+00

Methylation in Case

1.22E-01 (Median) Methylation in Control 8.60E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCB1 in breast cancer [ 17 ]

Location

5'UTR (cg06562372)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.21E+00 Statistic Test p-value: 7.58E-09; Z-score: 1.27E+00

Methylation in Case

1.51E-01 (Median) Methylation in Control 1.25E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCB1 in breast cancer [ 17 ]

Location

5'UTR (cg27507700)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.53E+00 Statistic Test p-value: 9.74E-09; Z-score: 1.81E+00

Methylation in Case

8.47E-02 (Median) Methylation in Control 5.54E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCB1 in breast cancer [ 17 ]

Location

5'UTR (cg09105881)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.36E+00 Statistic Test p-value: 1.38E-08; Z-score: 1.52E+00

Methylation in Case

1.25E-01 (Median) Methylation in Control 9.21E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCB1 in breast cancer [ 17 ]

Location

5'UTR (cg00862116)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.46E+00 Statistic Test p-value: 2.67E-08; Z-score: 1.14E+00

Methylation in Case

9.86E-02 (Median) Methylation in Control 6.76E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCB1 in breast cancer [ 17 ]

Location

5'UTR (cg16772035)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.32E+00 Statistic Test p-value: 2.13E-07; Z-score: 1.24E+00

Methylation in Case

8.59E-02 (Median) Methylation in Control 6.50E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCB1 in breast cancer [ 17 ]

Location

5'UTR (cg00141548)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.26E+00 Statistic Test p-value: 2.75E-07; Z-score: 1.28E+00

Methylation in Case

1.43E-01 (Median) Methylation in Control 1.13E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCB1 in breast cancer [ 17 ]

Location

5'UTR (cg15759056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.54E+00 Statistic Test p-value: 6.17E-07; Z-score: 1.03E+00

Methylation in Case

4.38E-02 (Median) Methylation in Control 2.86E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCB1 in breast cancer [ 17 ]

Location

5'UTR (cg16288248)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.24E+00 Statistic Test p-value: 1.10E-05; Z-score: 8.79E-01

Methylation in Case

6.53E-02 (Median) Methylation in Control 5.24E-02 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCB1 in breast cancer [ 17 ]

Location

5'UTR (cg22899422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 8.70E-05; Z-score: -7.35E-01

Methylation in Case

7.48E-01 (Median) Methylation in Control 7.78E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 14

Methylation of ABCB1 in breast cancer [ 17 ]

Location

Body (cg19861260)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.56E+00 Statistic Test p-value: 1.35E-12; Z-score: -2.40E+00

Methylation in Case

4.10E-01 (Median) Methylation in Control 6.39E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 15

Methylation of ABCB1 in breast cancer [ 17 ]

Location

Body (cg14319793)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.11E+00 Statistic Test p-value: 1.08E-08; Z-score: -1.80E+00

Methylation in Case

7.58E-01 (Median) Methylation in Control 8.40E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 16

Methylation of ABCB1 in breast cancer [ 17 ]

Location

Body (cg25477497)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 7.48E-05; Z-score: -9.95E-01

Methylation in Case

5.40E-01 (Median) Methylation in Control 6.21E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 17

Methylation of ABCB1 in breast cancer [ 17 ]

Location

Body (cg24138422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 4.42E-02; Z-score: -3.26E-01

Methylation in Case

8.09E-01 (Median) Methylation in Control 8.53E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 18

Methylation of ABCB1 in breast cancer [ 17 ]

Location

Body (cg23479988)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 4.87E-02; Z-score: -5.53E-01

Methylation in Case

7.74E-01 (Median) Methylation in Control 8.41E-01 (Median)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Patient tissue samples

  Invasive ductal carcinoma of breast

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of ABCB1 in Invasive ductal carcinoma of breast [ 10 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Bisulfite pyrosequencing

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-PCR

Studied Phenotype

Invasive ductal carcinoma of breast [ ICD-11: 2C61.0]

Frequency

40% of the studied tumor samples

Experimental Material

Patient tissue samples

Additional Notes

DNA methylation levels of ABCB1 was higher in oestrogen receptor (ER) positive vs. ER negative tumours; whereas methylation levels of ABCB1 was lower in tumours with a TP53 mutation.

  Prostate cancer

           8 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of ABCB1 in prostate cancer [ 11 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Methylation-specific PCR

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Frequency

72% of the studied tumor samples

Experimental Material

Patient tissue samples

Additional Notes

Promoter methylation of ABCB1 predominantly occurred in PCa and was rarely detected in NPT (p < 0.001).

  Epigenetic Phenomenon 2

Methylation of ABCB1 in prostate cancer [ 28 ]

Location

TSS1500 (cg22844229)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.82E+00 Statistic Test p-value: 1.43E-02; Z-score: -1.77E+00

Methylation in Case

2.42E-01 (Median) Methylation in Control 4.40E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCB1 in prostate cancer [ 28 ]

Location

TSS1500 (cg22117918)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.46E+00 Statistic Test p-value: 3.71E-02; Z-score: -4.52E+00

Methylation in Case

1.69E-01 (Median) Methylation in Control 2.48E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCB1 in prostate cancer [ 28 ]

Location

TSS1500 (cg02322908)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.75E+00 Statistic Test p-value: 4.52E-02; Z-score: 4.67E+00

Methylation in Case

2.28E-01 (Median) Methylation in Control 1.30E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCB1 in prostate cancer [ 28 ]

Location

Body (cg16614288)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.23E+00 Statistic Test p-value: 3.88E-02; Z-score: 1.81E+00

Methylation in Case

8.33E-01 (Median) Methylation in Control 6.78E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCB1 in prostate cancer [ 28 ]

Location

Body (cg27005847)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.33E+00 Statistic Test p-value: 4.00E-02; Z-score: -1.52E+00

Methylation in Case

4.31E-01 (Median) Methylation in Control 5.73E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCB1 in prostate cancer [ 28 ]

Location

Body (cg16374080)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.09E+00 Statistic Test p-value: 4.14E-02; Z-score: 1.64E+00

Methylation in Case

8.63E-01 (Median) Methylation in Control 7.90E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCB1 in prostate cancer [ 28 ]

Location

3'UTR (cg24042313)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.48E+00 Statistic Test p-value: 4.03E-02; Z-score: 6.93E+00

Methylation in Case

6.32E-01 (Median) Methylation in Control 4.26E-01 (Median)

Studied Phenotype

Prostate cancer [ ICD-11: 2C82]

Experimental Material

Patient tissue samples

  Newborns with tetralogy of fallot

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of ABCB1 in newborns with tetralogy of fallot [ 13 ]

Location

cg25477497

Epigenetic Type

Methylation Experiment Method HumanMethylation450 BeadChip

Related Molecular Changes

Down regulation of ABCB1 Experiment Method GDAC database

Studied Phenotype

Newborns with tetralogy of fallot [ ICD-11: LA88.2]

Experimental Material

Patient tissue samples

Additional Notes

ABCB1 is differentially methylated in the blood DNA of newborns with TOF compared with controls.

  Glioblastoma multiforme

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of ABCB1 in glioblastoma multiforme [ 14 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Bisulfite pyrosequencing

Related Molecular Changes

level of ABCB1 Unchanged Experiment Method RT-qPCR

Studied Phenotype

Glioblastoma multiforme [ ICD-11: 2A00.00]

Experimental Material

Patient tissue samples

Additional Notes

No association between ABCB1 promoter methylation and ABCB1 expression or overall survival was seen.

  Atypical teratoid rhabdoid tumor

         12 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCB1 in atypical teratoid rhabdoid tumor [ 15 ]

Location

5'UTR (cg00141548)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 3.99E-09; Z-score: -1.49E+00

Methylation in Case

6.88E-01 (Median) Methylation in Control 7.91E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCB1 in atypical teratoid rhabdoid tumor [ 15 ]

Location

5'UTR (cg00862116)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.10E+00 Statistic Test p-value: 6.82E-09; Z-score: -1.38E+00

Methylation in Case

5.18E-01 (Median) Methylation in Control 5.68E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCB1 in atypical teratoid rhabdoid tumor [ 15 ]

Location

5'UTR (cg04099454)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.28E+00 Statistic Test p-value: 2.59E-08; Z-score: 1.54E+00

Methylation in Case

8.14E-01 (Median) Methylation in Control 6.34E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCB1 in atypical teratoid rhabdoid tumor [ 15 ]

Location

5'UTR (cg06562372)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 6.25E-08; Z-score: -1.67E+00

Methylation in Case

8.34E-01 (Median) Methylation in Control 8.71E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCB1 in atypical teratoid rhabdoid tumor [ 15 ]

Location

5'UTR (cg09105881)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.12E+00 Statistic Test p-value: 1.59E-07; Z-score: -1.24E+00

Methylation in Case

7.86E-01 (Median) Methylation in Control 8.82E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCB1 in atypical teratoid rhabdoid tumor [ 15 ]

Location

5'UTR (cg12270822)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.22E+00 Statistic Test p-value: 3.67E-07; Z-score: 1.01E+00

Methylation in Case

8.66E-01 (Median) Methylation in Control 7.07E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCB1 in atypical teratoid rhabdoid tumor [ 15 ]

Location

5'UTR (cg15759056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.54E+00 Statistic Test p-value: 1.59E-06; Z-score: 1.30E+00

Methylation in Case

6.25E-01 (Median) Methylation in Control 4.05E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCB1 in atypical teratoid rhabdoid tumor [ 15 ]

Location

5'UTR (cg16288248)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.89E+00 Statistic Test p-value: 1.74E-06; Z-score: -1.17E+00

Methylation in Case

1.91E-01 (Median) Methylation in Control 3.61E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCB1 in atypical teratoid rhabdoid tumor [ 15 ]

Location

5'UTR (cg16772035)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.06E+00 Statistic Test p-value: 1.84E-06; Z-score: -9.22E-01

Methylation in Case

8.39E-01 (Median) Methylation in Control 8.89E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCB1 in atypical teratoid rhabdoid tumor [ 15 ]

Location

5'UTR (cg22899422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.18E+00 Statistic Test p-value: 6.55E-06; Z-score: -6.93E-01

Methylation in Case

5.25E-01 (Median) Methylation in Control 6.18E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCB1 in atypical teratoid rhabdoid tumor [ 15 ]

Location

5'UTR (cg27507700)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 1.40E-05; Z-score: -9.46E-01

Methylation in Case

7.40E-01 (Median) Methylation in Control 8.08E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCB1 in atypical teratoid rhabdoid tumor [ 15 ]

Location

Body (cg14319793)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 4.49E-02; Z-score: -3.72E-01

Methylation in Case

9.01E-01 (Median) Methylation in Control 9.29E-01 (Median)

Studied Phenotype

Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y]

Experimental Material

Patient tissue samples

  Bladder cancer

         16 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

5'UTR (cg04099454)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -2.25E+00 Statistic Test p-value: 3.97E-11; Z-score: -5.54E+01

Methylation in Case

4.11E-01 (Median) Methylation in Control 9.24E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

5'UTR (cg22899422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.57E+00 Statistic Test p-value: 1.65E-07; Z-score: -2.74E+01

Methylation in Case

5.21E-01 (Median) Methylation in Control 8.16E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

5'UTR (cg16772035)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.90E+00 Statistic Test p-value: 1.62E-04; Z-score: 9.95E+00

Methylation in Case

1.39E-01 (Median) Methylation in Control 7.32E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

5'UTR (cg16288248)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.47E+00 Statistic Test p-value: 6.46E-04; Z-score: 2.76E+00

Methylation in Case

8.15E-02 (Median) Methylation in Control 5.53E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

5'UTR (cg00141548)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.40E+00 Statistic Test p-value: 8.47E-04; Z-score: 3.64E+00

Methylation in Case

1.64E-01 (Median) Methylation in Control 1.17E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

5'UTR (cg09105881)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.50E+00 Statistic Test p-value: 1.62E-03; Z-score: 4.85E+00

Methylation in Case

1.38E-01 (Median) Methylation in Control 9.19E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

5'UTR (cg27507700)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.53E+00 Statistic Test p-value: 2.28E-03; Z-score: 6.16E+00

Methylation in Case

8.75E-02 (Median) Methylation in Control 5.72E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

5'UTR (cg15759056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.90E+00 Statistic Test p-value: 4.36E-03; Z-score: 7.20E+00

Methylation in Case

5.76E-02 (Median) Methylation in Control 3.03E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

5'UTR (cg12270822)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.38E+00 Statistic Test p-value: 5.21E-03; Z-score: 2.21E+00

Methylation in Case

1.23E-01 (Median) Methylation in Control 8.91E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

5'UTR (cg06562372)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 8.22E-03; Z-score: -2.73E-01

Methylation in Case

1.56E-01 (Median) Methylation in Control 1.58E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

5'UTR (cg00862116)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.25E+00 Statistic Test p-value: 1.20E-02; Z-score: 1.76E+00

Methylation in Case

9.22E-02 (Median) Methylation in Control 7.35E-02 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

Body (cg14319793)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.26E+00 Statistic Test p-value: 1.29E-06; Z-score: -6.15E+00

Methylation in Case

6.92E-01 (Median) Methylation in Control 8.73E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

Body (cg19861260)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.91E+00 Statistic Test p-value: 8.55E-06; Z-score: -8.13E+00

Methylation in Case

2.33E-01 (Median) Methylation in Control 4.45E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 14

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

Body (cg24138422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.14E+00 Statistic Test p-value: 2.26E-03; Z-score: -6.38E+00

Methylation in Case

7.15E-01 (Median) Methylation in Control 8.17E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 15

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

Body (cg25477497)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.17E+00 Statistic Test p-value: 9.48E-03; Z-score: -2.09E+00

Methylation in Case

5.29E-01 (Median) Methylation in Control 6.20E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 16

Methylation of ABCB1 in bladder cancer [ 16 ]

Location

Body (cg23479988)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 1.18E-02; Z-score: -1.76E+00

Methylation in Case

7.49E-01 (Median) Methylation in Control 7.90E-01 (Median)

Studied Phenotype

Bladder cancer [ ICD-11: 2C94]

Experimental Material

Patient tissue samples

  Renal cell carcinoma

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCB1 in clear cell renal cell carcinoma [ 18 ]

Location

5'UTR (cg00141548)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.58E+00 Statistic Test p-value: 5.64E-04; Z-score: -7.53E-01

Methylation in Case

6.12E-02 (Median) Methylation in Control 9.65E-02 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCB1 in clear cell renal cell carcinoma [ 18 ]

Location

Body (cg25477497)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.24E+00 Statistic Test p-value: 3.97E-04; Z-score: -2.29E+00

Methylation in Case

4.99E-01 (Median) Methylation in Control 6.19E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCB1 in clear cell renal cell carcinoma [ 18 ]

Location

Body (cg19861260)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.39E+00 Statistic Test p-value: 4.16E-03; Z-score: -1.64E+00

Methylation in Case

3.36E-01 (Median) Methylation in Control 4.69E-01 (Median)

Studied Phenotype

Renal cell carcinoma [ ICD-11: 2C90]

Experimental Material

Patient tissue samples

  Colorectal cancer

         16 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

5'UTR (cg04099454)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.25E+00 Statistic Test p-value: 2.79E-09; Z-score: -3.46E+00

Methylation in Case

6.58E-01 (Median) Methylation in Control 8.23E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

5'UTR (cg09105881)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.09E+00 Statistic Test p-value: 1.54E-04; Z-score: 3.66E-01

Methylation in Case

1.27E-01 (Median) Methylation in Control 1.16E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

5'UTR (cg27507700)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.16E+00 Statistic Test p-value: 1.75E-04; Z-score: 5.19E-01

Methylation in Case

8.79E-02 (Median) Methylation in Control 7.60E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

5'UTR (cg22899422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 2.19E-04; Z-score: -1.36E+00

Methylation in Case

8.80E-01 (Median) Methylation in Control 9.17E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

5'UTR (cg06562372)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.12E+00 Statistic Test p-value: 3.39E-04; Z-score: 5.07E-01

Methylation in Case

8.65E-02 (Median) Methylation in Control 7.74E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

5'UTR (cg12270822)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 4.08E-04; Z-score: 2.20E-01

Methylation in Case

1.06E-01 (Median) Methylation in Control 9.90E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

5'UTR (cg00141548)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.21E+00 Statistic Test p-value: 4.10E-04; Z-score: 6.59E-01

Methylation in Case

1.51E-01 (Median) Methylation in Control 1.25E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

5'UTR (cg16288248)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 2.17E-03; Z-score: -8.40E-02

Methylation in Case

1.07E-01 (Median) Methylation in Control 1.09E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

5'UTR (cg15759056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.09E+00 Statistic Test p-value: 2.34E-03; Z-score: -1.50E-01

Methylation in Case

2.16E-02 (Median) Methylation in Control 2.34E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

5'UTR (cg00862116)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 2.73E-03; Z-score: -4.18E-02

Methylation in Case

9.36E-02 (Median) Methylation in Control 9.54E-02 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

5'UTR (cg16772035)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.01E+00 Statistic Test p-value: 3.28E-03; Z-score: 3.76E-02

Methylation in Case

1.08E-01 (Median) Methylation in Control 1.07E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

Body (cg25477497)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.80E+00 Statistic Test p-value: 2.90E-08; Z-score: -2.04E+00

Methylation in Case

4.10E-01 (Median) Methylation in Control 7.37E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

Body (cg19861260)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.96E+00 Statistic Test p-value: 6.91E-06; Z-score: -1.70E+00

Methylation in Case

2.34E-01 (Median) Methylation in Control 4.59E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 14

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

Body (cg23479988)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 3.57E-04; Z-score: -1.53E+00

Methylation in Case

8.75E-01 (Median) Methylation in Control 9.10E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 15

Methylation of ABCB1 in colorectal cancer [ 19 ]

Location

Body (cg24138422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.00E+00 Statistic Test p-value: 6.68E-03; Z-score: -1.71E-01

Methylation in Case

9.21E-01 (Median) Methylation in Control 9.25E-01 (Median)

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 16

Hypermethylation of ABCB1 in colorectal cancer [ 47 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Bisulfite sequencing

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Frequency

69% of the studied tumor samples

Experimental Material

Korean patient tissue samples

Additional Notes

The Hypermethylation of ABCB1 in cancer tissues was not significantly associated with any clinical parameters.

  Depression

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCB1 in depression [ 20 ]

Location

5'UTR (cg00862116)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.09E+00 Statistic Test p-value: 4.70E-02; Z-score: 5.25E-01

Methylation in Case

5.23E-02 (Median) Methylation in Control 4.80E-02 (Median)

Studied Phenotype

Depression [ ICD-11: 6A8Z]

Experimental Material

Patient tissue samples

  Hepatocellular carcinoma

         13 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

5'UTR (cg00141548)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.20E+00 Statistic Test p-value: 1.21E-07; Z-score: -1.16E+00

Methylation in Case

9.07E-02 (Median) Methylation in Control 1.09E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

5'UTR (cg12270822)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.12E+00 Statistic Test p-value: 8.63E-04; Z-score: -5.36E-01

Methylation in Case

6.11E-02 (Median) Methylation in Control 6.86E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

5'UTR (cg27507700)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.13E+00 Statistic Test p-value: 2.34E-03; Z-score: -8.69E-01

Methylation in Case

5.26E-02 (Median) Methylation in Control 5.92E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

5'UTR (cg00862116)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 2.53E-03; Z-score: -4.81E-01

Methylation in Case

5.88E-02 (Median) Methylation in Control 6.78E-02 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

5'UTR (cg04099454)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 4.73E-03; Z-score: -1.96E-01

Methylation in Case

8.50E-01 (Median) Methylation in Control 8.74E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

5'UTR (cg22899422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 3.59E-02; Z-score: -1.66E-01

Methylation in Case

8.09E-01 (Median) Methylation in Control 8.15E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

TSS1500 (cg13362272)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.18E+00 Statistic Test p-value: 6.67E-11; Z-score: -4.26E+00

Methylation in Case

7.56E-01 (Median) Methylation in Control 8.94E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

TSS1500 (cg20038225)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.18E+00 Statistic Test p-value: 7.98E-11; Z-score: -3.31E+00

Methylation in Case

6.83E-01 (Median) Methylation in Control 8.05E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

1stExon (cg12501142)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.16E+00 Statistic Test p-value: 2.97E-10; Z-score: -5.15E+00

Methylation in Case

7.32E-01 (Median) Methylation in Control 8.50E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 10

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

Body (cg23260105)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.19E+00 Statistic Test p-value: 3.23E-11; Z-score: -1.15E+01

Methylation in Case

8.18E-01 (Median) Methylation in Control 9.75E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 11

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

Body (cg25477497)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.30E+00 Statistic Test p-value: 1.15E-04; Z-score: -1.05E+00

Methylation in Case

2.27E-01 (Median) Methylation in Control 2.95E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 12

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

Body (cg19861260)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.40E+00 Statistic Test p-value: 7.57E-04; Z-score: -1.41E+00

Methylation in Case

1.65E-01 (Median) Methylation in Control 2.31E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 13

Methylation of ABCB1 in hepatocellular carcinoma [ 21 ]

Location

3'UTR (cg23533270)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.45E+00 Statistic Test p-value: 1.26E-11; Z-score: -1.65E+00

Methylation in Case

4.39E-01 (Median) Methylation in Control 6.37E-01 (Median)

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Patient tissue samples

  HIV infection

           9 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCB1 in HIV infection [ 22 ]

Location

5'UTR (cg00862116)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.30E+00 Statistic Test p-value: 6.15E-05; Z-score: 1.14E+00

Methylation in Case

5.53E-02 (Median) Methylation in Control 4.25E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCB1 in HIV infection [ 22 ]

Location

5'UTR (cg16772035)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.31E+00 Statistic Test p-value: 5.48E-03; Z-score: 1.64E+00

Methylation in Case

8.79E-02 (Median) Methylation in Control 6.73E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCB1 in HIV infection [ 22 ]

Location

5'UTR (cg22899422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.02E+00 Statistic Test p-value: 3.31E-02; Z-score: -9.71E-01

Methylation in Case

9.07E-01 (Median) Methylation in Control 9.28E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCB1 in HIV infection [ 22 ]

Location

5'UTR (cg09105881)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.11E+00 Statistic Test p-value: 4.24E-02; Z-score: 6.62E-01

Methylation in Case

9.70E-02 (Median) Methylation in Control 8.75E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCB1 in HIV infection [ 22 ]

Location

5'UTR (cg15759056)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.79E+00 Statistic Test p-value: 4.30E-02; Z-score: 8.28E-01

Methylation in Case

9.18E-03 (Median) Methylation in Control 5.12E-03 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCB1 in HIV infection [ 22 ]

Location

Body (cg24138422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 3.40E-05; Z-score: 9.93E-01

Methylation in Case

9.20E-01 (Median) Methylation in Control 8.96E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCB1 in HIV infection [ 22 ]

Location

Body (cg25477497)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.27E+00 Statistic Test p-value: 1.76E-04; Z-score: 1.20E+00

Methylation in Case

8.33E-02 (Median) Methylation in Control 6.55E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCB1 in HIV infection [ 22 ]

Location

Body (cg19861260)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.39E+00 Statistic Test p-value: 3.60E-03; Z-score: 1.13E+00

Methylation in Case

1.27E-01 (Median) Methylation in Control 9.12E-02 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 9

Methylation of ABCB1 in HIV infection [ 22 ]

Location

Body (cg14319793)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.03E+00 Statistic Test p-value: 1.18E-02; Z-score: -5.41E-01

Methylation in Case

9.09E-01 (Median) Methylation in Control 9.36E-01 (Median)

Studied Phenotype

HIV infection [ ICD-11: 1C62.Z]

Experimental Material

Patient tissue samples

  Pancretic ductal adenocarcinoma

           8 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCB1 in pancretic ductal adenocarcinoma [ 24 ]

Location

5'UTR (cg13765368)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.49E+00 Statistic Test p-value: 3.85E-15; Z-score: 2.17E+00

Methylation in Case

1.26E-01 (Median) Methylation in Control 8.46E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCB1 in pancretic ductal adenocarcinoma [ 24 ]

Location

TSS1500 (cg23099740)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.09E+00 Statistic Test p-value: 2.70E-09; Z-score: 1.36E+00

Methylation in Case

6.57E-01 (Median) Methylation in Control 6.05E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCB1 in pancretic ductal adenocarcinoma [ 24 ]

Location

TSS1500 (cg10017118)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.03E+00 Statistic Test p-value: 2.43E-02; Z-score: 3.37E-01

Methylation in Case

5.79E-01 (Median) Methylation in Control 5.62E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCB1 in pancretic ductal adenocarcinoma [ 24 ]

Location

TSS200 (cg11960629)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.10E+00 Statistic Test p-value: 1.05E-20; Z-score: 3.72E+00

Methylation in Case

1.82E-01 (Median) Methylation in Control 8.65E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCB1 in pancretic ductal adenocarcinoma [ 24 ]

Location

TSS200 (cg08074851)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 2.79E+00 Statistic Test p-value: 2.91E-18; Z-score: 3.35E+00

Methylation in Case

3.99E-01 (Median) Methylation in Control 1.43E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 6

Methylation of ABCB1 in pancretic ductal adenocarcinoma [ 24 ]

Location

TSS200 (cg13052102)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.06E+00 Statistic Test p-value: 2.11E-02; Z-score: 2.83E-01

Methylation in Case

5.30E-02 (Median) Methylation in Control 5.02E-02 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 7

Methylation of ABCB1 in pancretic ductal adenocarcinoma [ 24 ]

Location

Body (cg24334149)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.24E+00 Statistic Test p-value: 3.97E-07; Z-score: -1.56E+00

Methylation in Case

4.58E-01 (Median) Methylation in Control 5.70E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 8

Methylation of ABCB1 in pancretic ductal adenocarcinoma [ 24 ]

Location

Body (cg05207973)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.10E+00 Statistic Test p-value: 5.44E-07; Z-score: 8.56E-01

Methylation in Case

6.96E-01 (Median) Methylation in Control 6.32E-01 (Median)

Studied Phenotype

Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0]

Experimental Material

Patient tissue samples

  Panic disorder

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCB1 in panic disorder [ 25 ]

Location

5'UTR (cg04099454)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.33E+00 Statistic Test p-value: 1.67E-02; Z-score: -4.72E-01

Methylation in Case

5.42E-01 (Median) Methylation in Control 7.22E-01 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCB1 in panic disorder [ 25 ]

Location

5'UTR (cg22899422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.11E+00 Statistic Test p-value: 4.18E-02; Z-score: -3.26E-01

Methylation in Case

1.08E+00 (Median) Methylation in Control 1.20E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCB1 in panic disorder [ 25 ]

Location

Body (cg25477497)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 8.60E-01 Statistic Test p-value: 2.38E-06; Z-score: 8.27E-01

Methylation in Case

-2.53E+00 (Median) Methylation in Control -2.94E+00 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCB1 in panic disorder [ 25 ]

Location

Body (cg24138422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.91E+00 Statistic Test p-value: 2.54E-04; Z-score: -8.53E-01

Methylation in Case

5.17E-01 (Median) Methylation in Control 9.85E-01 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 5

Methylation of ABCB1 in panic disorder [ 25 ]

Location

Body (cg23479988)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -6.21E-01 Statistic Test p-value: 3.15E-02; Z-score: -4.69E-01

Methylation in Case

-4.38E-01 (Median) Methylation in Control -2.72E-01 (Median)

Studied Phenotype

Panic disorder [ ICD-11: 6B01]

Experimental Material

Patient tissue samples

  Papillary thyroid cancer

           4 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCB1 in papillary thyroid cancer [ 26 ]

Location

5'UTR (cg22899422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.05E+00 Statistic Test p-value: 4.89E-08; Z-score: -1.58E+00

Methylation in Case

8.63E-01 (Median) Methylation in Control 9.05E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCB1 in papillary thyroid cancer [ 26 ]

Location

5'UTR (cg16772035)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.20E+00 Statistic Test p-value: 4.41E-03; Z-score: 7.40E-01

Methylation in Case

8.02E-02 (Median) Methylation in Control 6.70E-02 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCB1 in papillary thyroid cancer [ 26 ]

Location

5'UTR (cg09105881)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.08E+00 Statistic Test p-value: 3.23E-02; Z-score: 4.29E-01

Methylation in Case

9.18E-02 (Median) Methylation in Control 8.54E-02 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 4

Methylation of ABCB1 in papillary thyroid cancer [ 26 ]

Location

Body (cg25477497)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.04E+00 Statistic Test p-value: 4.92E-03; Z-score: -4.57E-01

Methylation in Case

8.08E-01 (Median) Methylation in Control 8.42E-01 (Median)

Studied Phenotype

Papillary thyroid cancer [ ICD-11: 2D10.1]

Experimental Material

Patient tissue samples

  Systemic lupus erythematosus

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCB1 in systemic lupus erythematosus [ 27 ]

Location

5'UTR (cg22899422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 4.14E-02; Z-score: -2.60E-01

Methylation in Case

8.92E-01 (Median) Methylation in Control 9.02E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCB1 in systemic lupus erythematosus [ 27 ]

Location

Body (cg25477497)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: 1.07E+00 Statistic Test p-value: 2.74E-02; Z-score: 1.95E-01

Methylation in Case

9.84E-02 (Median) Methylation in Control 9.23E-02 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCB1 in systemic lupus erythematosus [ 27 ]

Location

Body (cg24138422)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.01E+00 Statistic Test p-value: 4.61E-02; Z-score: -1.99E-01

Methylation in Case

9.15E-01 (Median) Methylation in Control 9.20E-01 (Median)

Studied Phenotype

Systemic lupus erythematosus [ ICD-11: 4A40.0]

Experimental Material

Patient tissue samples

  Colon cancer

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Methylation of ABCB1 in colon adenocarcinoma [ 29 ]

Location

Body (cg24474319)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.16E+00 Statistic Test p-value: 9.45E-05; Z-score: -2.54E+00

Methylation in Case

4.82E-01 (Median) Methylation in Control 5.60E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 2

Methylation of ABCB1 in colon adenocarcinoma [ 29 ]

Location

Body (cg10860553)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.24E+00 Statistic Test p-value: 1.26E-04; Z-score: -3.46E+00

Methylation in Case

4.74E-01 (Median) Methylation in Control 5.89E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

Methylation of ABCB1 in colon adenocarcinoma [ 29 ]

Location

Body (cg16793755)

Epigenetic Type

Methylation Experiment Method Infinium HumanMethylation450 BeadChip

Methylation Fold Change

Fold Change: -1.15E+00 Statistic Test p-value: 6.76E-04; Z-score: -2.17E+00

Methylation in Case

6.13E-01 (Median) Methylation in Control 7.07E-01 (Median)

Studied Phenotype

Colon cancer [ ICD-11: 2B90]

Experimental Material

Patient tissue samples

  Adult acute myeloid leukemia

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of ABCB1 in adult acute myeloid leukemia [ 46 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Methylation-sensitive melting curve analysis

Studied Phenotype

Adult acute myeloid leukemia [ ICD-11: 2A60]

Frequency

11 (4%) out of the 287 studied tumor samples

Experimental Material

Patient tissue samples

Additional Notes

There is a difference of methylation of ABCB1 between childhood and adult AML.

  Childhood acute myeloid leukemia

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of ABCB1 in childhood acute myeloid leukemia [ 46 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Methylation-sensitive melting curve analysis

Studied Phenotype

Childhood acute myeloid leukemia [ ICD-11: 2A60]

Frequency

5 (8%) out of the 66 studied tumor samples

Experimental Material

Patient tissue samples

Additional Notes

No significant impact on prognosis was seen for promoter Hypermethylation in ABCB1.

  Gastric cancer

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of ABCB1 in gastric carcinogenesis [ 48 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Methylation-specific PCR

Studied Phenotype

Gastric cancer [ ICD-11: 2B72]

Frequency

31% of the studied tumor samples

Experimental Material

Patient tissue samples

Additional Notes

The methylation ratio (MR) of the cancer lesions (31.3 +/- 20.5) was significantly higher than that of non non-neoplastic mucosa (20.9 +/- 31.3, p = 0.0004).

  Non-small cell lung cancer

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypermethylation of ABCB1 in non-small cell lung cancer [ 49 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Methylation-specific PCR

Studied Phenotype

Non-small cell lung cancer [ ICD-11: 2C25.4]

Frequency

31 (24%) out of the 124 studied tumor samples

Experimental Material

Chinese patient tissue samples

Additional Notes

The frequency of methylation of ABCB1 is disparity between the mainland of China and the United States in the NSCLC populations.

  Intracranial artery stenosis

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypomethylation of ABCB1 in intracranial artery stenosis [ 50 ]

Location

Promoter

Epigenetic Type

Methylation Experiment Method Bisulfite sequencing

Studied Phenotype

Intracranial artery stenosis [ ICD-11: BD55]

Experimental Material

Chinese patient tissue samples

Additional Notes

ABCB1 promoter methylation is association with aspirin exposure, platelet function, and clinical outcomes in Chinese intracranial artery stenosis patients.

Histone acetylation

  Acute myeloid leukemia

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypoacetylation of ABCB1 in acute myeloid leukemia (compare with valproate-treatment counterpart AML cells) [ 30 ]

Location

Promoter

Epigenetic Type

Histone acetylation Experiment Method Chromatin immunoprecipitation

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Acute myeloid leukemia [ ICD-11: 2A60]

Experimental Material

Multiple cell lines of human

Additional Notes

Chromatin immunoprecipitation revealed the hyperacetylation of histone proteins in the promoter regions of MDR1 on valproate treatment.

  Epigenetic Phenomenon 2

Hypoacetylation of ABCB1 in AML (compare with valproate treatment counterpart cells) [ 30 ]

Location

Promoter

Epigenetic Type

Histone acetylation Experiment Method Chromatin immunoprecipitation

Related Molecular Changes

Down regulation of ABCB1 Experiment Method Western Blot

Studied Phenotype

Acute myeloid leukemia [ ICD-11: 2A60]

Experimental Material

Multiple cell lines of human

Additional Notes

Hyperacetylation of histone proteins in the promoter regions of MDR1 on valproate treatment.

  Breast cancer

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypoacetylation of ABCB1 in breast cancer (compare with doxorubicin-resistant counterpart cells) [ 31 ]

Location

Promoter

Epigenetic Type

Histone acetylation Experiment Method Chromatin immunoprecipitation

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Multiple cell lines of human

Additional Notes

Elevated level of lysine 9-acetylated histone H3 at the MDR1 promoter in doxorubicinresistant MCF-7 cells.

  Lymphoma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypoacetylation of ABCB1 in lymphoid tumour (compare with etoposide-resistant counterpart cells) [ 32 ]

Location

Exon 1

Epigenetic Type

Histone acetylation Experiment Method Chromatin immunoprecipitation

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Lymphoma [ ICD-11: 2B30]

Experimental Material

Multiple cell lines of human

Additional Notes

Histone H3 acetylation in the same CpG island was significantly increased in drug-resistant cell line.

  Sarcoma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypoacetylation of ABCB1 in sarcoma (compare with multidrug-resistant counterpart cells) [ 33 ]

Location

968 bp upstream of exon 1

Epigenetic Type

Histone acetylation Experiment Method Chromatin immunoprecipitation

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Sarcoma [ ICD-11: 2A60.39]

Experimental Material

Multiple cell lines of human

Additional Notes

The chromatin structure of the ABCB1 upstream promoter is changed via acetylation of histone H3 initiating ABCB1 activation.

  Small cell lung cancer

           5 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) [ 34 ]

Location

Distal promoter (-981 to -817)

Epigenetic Type

Histone acetylation Experiment Method Chromatin immunoprecipitation

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Small cell lung cancer [ ICD-11: 2C25.1]

Experimental Material

Human small cell lung carcinoma cell line (H69)

Additional Notes

High acetylation level of histone H3 of ABCB1 in etoposide-resistant small cell lung carcinoma associated with higher ABCB1 expression.

  Epigenetic Phenomenon 2

Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) [ 34 ]

Location

Promoter (-981 to -817 and -222 to +37)

Epigenetic Type

Histone acetylation Experiment Method Chromatin immunoprecipitation

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Small cell lung cancer [ ICD-11: 2C25.1]

Experimental Material

Multiple cell lines of human

Additional Notes

TSA induces downregulation of ABCB1 expression in drug-resistant SCLC cell line, independently of promoter methylation, and MBD1 or PCAF recruitment.

  Epigenetic Phenomenon 3

Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) [ 34 ]

Location

Promoter (-981 to -817 and -222 to +37)

Epigenetic Type

Histone acetylation Experiment Method Chromatin immunoprecipitation

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Small cell lung cancer [ ICD-11: 2C25.1]

Experimental Material

Multiple cell lines of human

Additional Notes

TSA induces downregulation of ABCB1 expression in drug-resistant SCLC cell line, independently of promoter methylation, and MBD1 or PCAF recruitment.

  Epigenetic Phenomenon 4

Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) [ 34 ]

Location

Proximal promoter (+292 to +591)

Epigenetic Type

Histone acetylation Experiment Method Chromatin immunoprecipitation

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Small cell lung cancer [ ICD-11: 2C25.1]

Experimental Material

Human small cell lung carcinoma cell line (H69)

Additional Notes

High acetylation level of histone H3 of ABCB1 in etoposide-resistant small cell lung carcinoma associated with higher ABCB1 expression.

  Epigenetic Phenomenon 5

Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) [ 34 ]

Location

Proximal promoter (+292 to +591)

Epigenetic Type

Histone acetylation Experiment Method Chromatin immunoprecipitation

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Small cell lung cancer [ ICD-11: 2C25.1]

Experimental Material

Human small cell lung carcinoma cell line (H69)

Additional Notes

High acetylation level of histone H4 of ABCB1 in etoposide-resistant small cell lung carcinoma associated with higher ABCB1 expression.

  Promyeloblastic leukemia

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Hypoacetylation of ABCB1 in promyeloblastic leukemia (compare with valproate-treatment counterpart AML cells) [ 35 ]

Epigenetic Type

Histone acetylation Experiment Method Chromatin immunoprecipitation

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

Studied Phenotype

Promyeloblastic leukemia [ ICD-11: 2A60.0]

Experimental Material

Human leukemia stem cell-like cell line (KG-1a)

Additional Notes

Exposure of promyeloblastic leukemia cells for 24 h to 2 mM of the weak histone deacetylase inhibitor phenylbutyrate resulted in enhanced and marked expression of P-glycoprotein.

microRNA

  Gastric cancer

           3 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Higher expression of miR-129-5p in gastric cancer (compare with cisplatin-resistant counterpart cells) [ 36 ]

Epigenetic Type

microRNA Experiment Method Luciferase reporter assay

Related Molecular Changes

Down regulation of ABCB1 Experiment Method Western Blot

miRNA Stemloop ID

miR-129 miRNA Mature ID miR-129-5p

miRNA Sequence

CUUUUUGCGGUCUGGGCUUGC

miRNA Target Type

Direct

Studied Phenotype

Gastric cancer [ ICD-11: 2B72]

Experimental Material

Patient tissue samples

Additional Notes

miR-129 enhances chemosensitivity to cisplatin by suppressing P-gp protein in GC cells.

  Epigenetic Phenomenon 2

Higher expression of miR-508-5p in gastric cancer (compare to multidrug resistance counterpart cells) [ 41 ]

Epigenetic Type

microRNA Experiment Method Luciferase reporter assay

Related Molecular Changes

Down regulation of ABCB1 Experiment Method Western Blot

miRNA Stemloop ID

miR-508 miRNA Mature ID miR-508-5p

miRNA Sequence

UACUCCAGAGGGCGUCACUCAUG

miRNA Target Type

Direct

Studied Phenotype

Gastric cancer [ ICD-11: 2B72]

Experimental Material

Multiple cell lines of human

Additional Notes

By targeting ABCB1 and ZNRD1, miR-508-5p overexpression decreases the intracellular concentration of chemotherapeutics and promotes drug-induced apoptosis in MDR gastric cancer cells.

  Epigenetic Phenomenon 3

miR-129-5p downregulates of ABCB1 in gastric cancer [ 45 ]

Epigenetic Type

microRNA Experiment Method Luciferase reporter assay

Related Molecular Changes

Down regulation of ABCB1 Experiment Method Western Blot

miRNA Stemloop ID

miR-129 miRNA Mature ID miR-129-5p

miRNA Sequence

CUUUUUGCGGUCUGGGCUUGC

miRNA Target Type

Direct

Studied Phenotype

Gastric cancer [ ICD-11: 2B72]

Experimental Material

Human gastric adenocarcinoma cell line (SGC7901)

Additional Notes

miR-129-5p reduces ABCB1 expression in vivo at the post-transcriptional level.

  Breast cancer

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Higher expression of miR-137 in breast cancer (compare with multidrug-resistant counterpart cells) [ 37 ]

Epigenetic Type

microRNA Experiment Method Dual-luciferase reporter assay

Related Molecular Changes

Down regulation of ABCB1 Experiment Method Western Blot

miRNA Stemloop ID

miR-137 miRNA Mature ID Unclear

miRNA Target Type

Indirect(YB-1;ABCB1)

Studied Phenotype

Breast cancer [ ICD-11: 2C60-2C6Z]

Experimental Material

Human breast adenocarcinoma cell line (MCF-7)

Additional Notes

miR-137 was involved in MDR in cancer through modulation of P-gp by targeting YB-1.

  Ovarian cancer

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Higher expression of miR-186 in ovarian cancer (compare with cisplatin-resistant counterpart cells) [ 38 ]

Epigenetic Type

microRNA Experiment Method Dual-luciferase reporter assay

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

miRNA Stemloop ID

miR-186 miRNA Mature ID miR-186-5p

miRNA Sequence

CAAAGAAUUCUCCUUUUGGGCU

miRNA Target Type

Direct

Studied Phenotype

Ovarian cancer [ ICD-11: 2C73]

Experimental Material

Multiple cell lines of human

Additional Notes

miR-186 overexpression may increase the sensitivity of ovarian cancer cells to paclitaxel and cisplatin by targeting ABCB1.

  Epigenetic Phenomenon 2

Higher expression of miR-186 in ovarian cancer (compare with cisplatin-resistant counterpart cells) [ 38 ]

Epigenetic Type

microRNA Experiment Method Dual-luciferase reporter assay

Related Molecular Changes

Down regulation of ABCB1 Experiment Method Western Blot

miRNA Stemloop ID

miR-186 miRNA Mature ID miR-186-5p

miRNA Sequence

CAAAGAAUUCUCCUUUUGGGCU

miRNA Target Type

Direct

Studied Phenotype

Ovarian cancer [ ICD-11: 2C73]

Experimental Material

Multiple cell lines of human

Additional Notes

miR-186 overexpression may increase the sensitivity of ovarian cancer cells to paclitaxel and cisplatin by targeting ABCB1.

  Chronic myeloid leukemia

           2 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Higher expression of miR-214 in CML (compare with imatinib mesylate resistant counterpart cells) [ 39 ]

Epigenetic Type

microRNA Experiment Method Dual-luciferase reporter assay

Related Molecular Changes

Down regulation of ABCB1 Experiment Method Western Blot

miRNA Stemloop ID

miR-214 miRNA Mature ID miR-214-5p

miRNA Sequence

UGCCUGUCUACACUUGCUGUGC

miRNA Target Type

Direct

Studied Phenotype

Chronic myeloid leukemia [ ICD-11: 2B33.1]

Experimental Material

Patient tissue samples

Additional Notes

Decreased expression of microRNA-214 contributes to imatinib mesylate resistance of chronic myeloid leukemia patients by upregulating ABCB1 gene expression.

  Epigenetic Phenomenon 2

Higher expression of miR-9 in CML (compare with adriamycin resistant counterpart cells) [ 42 ]

Epigenetic Type

microRNA Experiment Method Luciferase reporter assay

Related Molecular Changes

Down regulation of ABCB1 Experiment Method Western Blot

miRNA Stemloop ID

miR-9 miRNA Mature ID miR-9-3p

miRNA Sequence

AUAAAGCUAGAUAACCGAAAGU

miRNA Target Type

Direct

Studied Phenotype

Chronic myeloid leukemia [ ICD-11: 2B33.1]

Experimental Material

Patient tissue samples, Multiple cell lines of human

Additional Notes

miR-9 and P-glycoprotein (P-gp) had a negative correlation in the CML patients, and the expression of miR-9 was increased in the CML.

  Hepatocellular carcinoma

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Higher expression of miR-223 in HCC (compare with multidrug resistance counterpart cells) [ 40 ]

Epigenetic Type

microRNA Experiment Method Luciferase reporter assay

Related Molecular Changes

Down regulation of ABCB1 Experiment Method Western Blot

miRNA Stemloop ID

miR-223 miRNA Mature ID miR-223-3p

miRNA Sequence

UGUCAGUUUGUCAAAUACCCCA

miRNA Target Type

Direct

Studied Phenotype

Hepatocellular carcinoma [ ICD-11: 2C12.02]

Experimental Material

Multiple cell lines of human

Additional Notes

miR-223 modulates multidrug resistance via downregulation of ABCB1 in hepatocellular carcinoma cells

  Colorectal cancer

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

Lower expression of miR-491-3p in colorectal cancer (compare to atorvastatin treatment cells) [ 43 ]

Epigenetic Type

microRNA Experiment Method Luciferase reporter assay

Related Molecular Changes

Down regulation of ABCB1 Experiment Method RT-qPCR

miRNA Stemloop ID

miR-491 miRNA Mature ID miR-491-3p

miRNA Sequence

CUUAUGCAAGAUUCCCUUCUAC

miRNA Target Type

Direct

Studied Phenotype

Colorectal cancer [ ICD-11: 2B91]

Experimental Material

Human epithelial colorectal adenocarcinoma cell line(Caco-2)

Additional Notes

Atorvastatin attenuation of ABCB1 expression is mediated by microRNA miR-491-3p in Caco-2 cells.

  Acute myeloid leukemia

           1 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

miR-1-3p downregulates of ABCB1 in acute myeloid leukemia [ 44 ]

Epigenetic Type

microRNA Experiment Method Luciferase reporter assay

Related Molecular Changes

Down regulation of ABCB1 Experiment Method Western Blot

miRNA Stemloop ID

miR-1 miRNA Mature ID miR-1-3p

miRNA Sequence

UGGAAUGUAAAGAAGUAUGUAU

miRNA Target Type

Direct

Studied Phenotype

Acute myeloid leukemia [ ICD-11: 2A60]

Experimental Material

Multiple cell lines of human

Additional Notes

PI3K/mTOR dual inhibitor BEZ235 effectively chemosensitizes AML cells via increasing miR-1-3p and subsequently down-regulating BAG4, EDN1 and ABCB1.

  Unclear Phenotype

           7 Epigenetic Phenomena Related to This Phenotype Click to Show/Hide the Full List

  Epigenetic Phenomenon 1

miR-1 directly targets ABCB1 [ 44 ]

Epigenetic Type

microRNA Experiment Method Luciferase reporter assay//qRT-PCR

miRNA Stemloop ID

miR-1 miRNA Mature ID miR-1-3p

miRNA Sequence

UGGAAUGUAAAGAAGUAUGUAU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 2

miR-129 directly targets ABCB1 [ 36 ]

Epigenetic Type

microRNA Experiment Method Luciferase reporter assay//qRT-PCR//Western blot

miRNA Stemloop ID

miR-129 miRNA Mature ID miR-129-5p

miRNA Sequence

CUUUUUGCGGUCUGGGCUUGC

miRNA Target Type

Direct

Experimental Material

Patient tissue samples

  Epigenetic Phenomenon 3

miR-186 directly targets ABCB1 [ 38 ]

Epigenetic Type

microRNA Experiment Method Luciferase reporter assay

miRNA Stemloop ID

miR-186 miRNA Mature ID miR-186-5p

miRNA Sequence

CAAAGAAUUCUCCUUUUGGGCU

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 4

miR-223 directly targets ABCB1 [ 40 ]

Epigenetic Type

microRNA Experiment Method GFP reporter assay//qRT-PCR//Western blot

miRNA Stemloop ID

miR-223 miRNA Mature ID miR-223-3p

miRNA Sequence

UGUCAGUUUGUCAAAUACCCCA

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 5

miR-491 directly targets ABCB1 [ 43 ]

Epigenetic Type

microRNA Experiment Method Luciferase reporter assay//qRT-PCR//Western blot

miRNA Stemloop ID

miR-491 miRNA Mature ID miR-491-3p

miRNA Sequence

CUUAUGCAAGAUUCCCUUCUAC

miRNA Target Type

Direct

Experimental Material

Human epithelial colorectal adenocarcinoma cell line(Caco-2)

  Epigenetic Phenomenon 6

miR-508 directly targets ABCB1 [ 41 ]

Epigenetic Type

microRNA Experiment Method Immunohistochemistry//In situ hybridization//Luciferase reporter assay//Microarray//qRT-PCR//Western blot

miRNA Stemloop ID

miR-508 miRNA Mature ID miR-508-5p

miRNA Sequence

UACUCCAGAGGGCGUCACUCAUG

miRNA Target Type

Direct

Experimental Material

Multiple cell lines of human

  Epigenetic Phenomenon 7

miR-9 directly targets ABCB1 [ 42 ]

Epigenetic Type

microRNA Experiment Method Luciferase reporter assay

miRNA Stemloop ID

miR-9 miRNA Mature ID miR-9-3p

miRNA Sequence

AUAAAGCUAGAUAACCGAAAGU

miRNA Target Type

Direct

Experimental Material

Patient tissue samples, Multiple cell lines of human
References
1 Up-regulation of ABCB1/P-glycoprotein by escaping promoter hypermethylation indicates poor prognosis in hematologic malignancy patients with and without bone marrow transplantation. Leuk Res. 2011 Jan;35(1):73-9.
2 CpG hypomethylation of MDR1 gene in tumor and serum of invasive ductal breast carcinoma patients. Clin Biochem. 2010 Mar;43(4-5):373-9.
3 Hypermethylation of ATP-binding cassette B1 (ABCB1) multidrug resistance 1 (MDR1) is associated with cisplatin resistance in the A549 lung adenocarcinoma cell line. Int J Exp Pathol. 2016 Dec;97(6):412-421.
4 Influence of MDR1 methylation on the curative effect of interventional embolism chemotherapy for cervical cancer. Ther Clin Risk Manag. 2016 Feb 15;12:217-23.
5 Genetic and epigenetic changes in host ABCB1 influences malaria susceptibility to Plasmodium falciparum. PLoS One. 2017 Apr 19;12(4):e0175702.
6 Expression and promoter methylation analysis of ATP-binding cassette genes in pancreatic cancer. Oncol Rep. 2012 Jan;27(1):265-9.
7 DNA methylation patterns at relapse in adult acute lymphocytic leukemia. Clin Cancer Res. 2002 Jun;8(6):1897-903.
8 DNA methylation profiling in doxorubicin treated primary locally advanced breast tumours identifies novel genes associated with survival and treatment response. Mol Cancer. 2010 Mar 25;9:68.
9 Promoter methylation patterns of ABCB1, ABCC1 and ABCG2 in human cancer cell lines, multidrug-resistant cell models and tumor, tumor-adjacent and tumor-distant tissues from breast cancer patients. Oncotarget. 2016 Nov 8;7(45):73347-73369.
10 Frequent aberrant DNA methylation of ABCB1, FOXC1, PPP2R2B and PTEN in ductal carcinoma in situ and early invasive breast cancer. Breast Cancer Res. 2010;12(1):R3.
11 Frequent down-regulation of ABC transporter genes in prostate cancer. BMC Cancer. 2015 Oct 12;15:683.
12 MDR1 promoter hypermethylation in MCF-7 human breast cancer cells: changes in chromatin structure induced by treatment with 5-Aza-cytidine. Cancer Biol Ther. 2004 Jun;3(6):540-8.
13 Newborn blood DNA epigenetic variations and signaling pathway genes associated with Tetralogy of Fallot (TOF). PLoS One. 2018 Sep 13;13(9):e0203893.
14 Epigenetic modulation of the drug resistance genes MGMT, ABCB1 and ABCG2 in glioblastoma multiforme. BMC Cancer. 2013 Dec 31;13:617.
15 Atypical Teratoid/Rhabdoid Tumors Are Comprised of Three Epigenetic Subgroups with Distinct Enhancer Landscapes. Cancer Cell. 2016 Mar 14;29(3):379-393.
16 DNA Methylation Dynamics in Urological Tumors.
17 Genome-wide Scan for Methylation Profiles in Breast Cancer
18 A CpG-methylation-based assay to predict survival in clear cell renal cell carcinoma. Nat Commun. 2015 Oct 30;6:8699.
19 Differences in DNA methylation signatures reveal multiple pathways of progression from adenoma to colorectal cancer. Gastroenterology. 2014 Aug;147(2):418-29.e8.
20 DNA methylation and inflammation marker profiles associated with a history of depression. Hum Mol Genet. 2018 Aug 15;27(16):2840-2850.
21 Exploring genome-wide DNA methylation profiles altered in hepatocellular carcinoma using Infinium HumanMethylation 450 BeadChips. Epigenetics. 2013 Jan;8(1):34-43.
22 HIV-1 Infection Accelerates Age According to the Epigenetic Clock. J Infect Dis. 2015 Nov 15;212(10):1563-73.
23 DNA methylation analysis of lung adenocarcinoma and adjacent non-tumor tissues
24 Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling. Int J Cancer. 2014 Sep 1;135(5):1110-8.
25 DNA Methylation signatures in panic disorder. Transl Psychiatry. 2017 Dec 18;7(12):1287.
26 Prognostic Classifier Based on Genome-Wide DNA Methylation Profiling in Well-Differentiated Thyroid Tumors. J Clin Endocrinol Metab. 2017 Nov 1;102(11):4089-4099.
27 Genome-wide DNA methylation analysis of systemic lupus erythematosus reveals persistent hypomethylation of interferon genes and compositional changes to CD4+ T-cell populations. PLoS Genet. 2013;9(8):e1003678.
28 Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array. BMC Genomics. 2014 Jan 22;15:51.
29 Genome-scale analysis of DNA methylation in colorectal cancer using Infinium HumanMethylation450 BeadChips. Epigenetics. 2013 Sep;8(9):921-34.
30 Histone deacetylase inhibitors induce a very broad, pleiotropic anticancer drug resistance phenotype in acute myeloid leukemia cells by modulation of multiple ABC transporter genes. Clin Cancer Res. 2009 Jun 1;15(11):3705-15.
31 Elevated level of lysine 9-acetylated histone H3 at the MDR1 promoter in multidrug-resistant cells. Cancer Sci. 2012 Apr;103(4):659-69.
32 Epigenetic regulation of the ABCB1 gene in drug-sensitive and drug-resistant lymphoid tumour cell lines obtained from canine patients. Vet J. 2014 Jan;199(1):103-9.
33 Genetic and epigenetic modeling of the origins of multidrug-resistant cells in a human sarcoma cell line. Cancer Res. 2005 Oct 15;65(20):9388-97.
34 The histone deacetylase inhibitor trichostatin A downregulates human MDR1 (ABCB1) gene expression by a transcription-dependent mechanism in a drug-resistant small cell lung carcinoma cell line model. Br J Cancer. 2007 Aug 20;97(4):562-73.
35 Salinomycin overcomes ABC transporter-mediated multidrug and apoptosis resistance in human leukemia stem cell-like KG-1a cells. Biochem Biophys Res Commun. 2010 Apr 16;394(4):1098-104.
36 MiR-129 regulates cisplatin-resistance in human gastric cancer cells by targeting P-gp. Biomed Pharmacother. 2017 Feb;86:450-456.
37 miR-137 restoration sensitizes multidrug-resistant MCF-7/ADM cells to anticancer agents by targeting YB-1. Acta Biochim Biophys Sin (Shanghai). 2013 Feb;45(2):80-6.
38 MicroRNA-186 induces sensitivity of ovarian cancer cells to paclitaxel and cisplatin by targeting ABCB1. J Ovarian Res. 2015 Dec 2;8:80.
39 Decreased expression of microRNA-214 contributes to imatinib mesylate resistance of chronic myeloid leukemia patients by upregulating ABCB1 gene expression. Exp Ther Med. 2018 Sep;16(3):1693-1700.
40 MiR-223 modulates multidrug resistance via downregulation of ABCB1 in hepatocellular carcinoma cells. Exp Biol Med (Maywood). 2013 Sep;238(9):1024-32.
41 miR-508-5p regulates multidrug resistance of gastric cancer by targeting ABCB1 and ZNRD1. Oncogene. 2014 Jun 19;33(25):3267-76.
42 miR-9 regulates the multidrug resistance of chronic myelogenous leukemia by targeting ABCB1. Oncol Rep. 2017 Apr;37(4):2193-2200.
43 Atorvastatin attenuation of ABCB1 expression is mediated by microRNA miR-491-3p in Caco-2 cells. Eur J Pharm Sci. 2016 Oct 10;93:431-6.
44 The PI3K/mTOR dual inhibitor BEZ235 suppresses proliferation and migration and reverses multidrug resistance in acute myeloid leukemia. Acta Pharmacol Sin. 2017 Mar;38(3):382-391.
45 Methylation of miR-129-5p CpG island modulates multi-drug resistance in gastric cancer by targeting ABC transporters. Oncotarget. 2014 Nov 30;5(22):11552-63.
46 Genetic and epigenetic similarities and differences between childhood and adult AML. Pediatr Blood Cancer. 2012 Apr;58(4):525-31.
47 Quantitative analysis of cancer-associated gene methylation connected to risk factors in Korean colorectal cancer patients. J Prev Med Public Health. 2012 Jul;45(4):251-8.
48 Effect of promoter methylation of multidrug resistance 1 (MDR1) gene in gastric carcinogenesis. Anticancer Res. 2009 Jan;29(1):337-41.
49 RASSF1A, APC, ESR1, ABCB1 and HOXC9, but not p16INK4A, DAPK1, PTEN and MT1G genes were frequently methylated in the stage I non-small cell lung cancer in China. J Cancer Res Clin Oncol. 2009 Dec;135(12):1675-84.
50 Association of ABCB1 promoter methylation with aspirin exposure, platelet function, and clinical outcomes in Chinese intracranial artery stenosis patients. Eur J Clin Pharmacol. 2017 Oct;73(10):1261-1269.

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