Detail Information of Epigenetic Regulations
General Information of Drug Transporter (DT) | |||||
---|---|---|---|---|---|
DT ID | DTD0003 Transporter Info | ||||
Gene Name | ABCB1 | ||||
Transporter Name | P-glycoprotein 1 | ||||
Gene ID | |||||
UniProt ID | |||||
Epigenetic Regulations of This DT (EGR) | |||||
---|---|---|---|---|---|
Methylation |
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Hematologic malignancies |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypomethylation of ABCB1 in hematologic malignancies | [ 1 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Related Molecular Changes |
Up regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Hematologic malignancies [ ICD-11: 2B33.Y] | ||||
Frequency |
56% of the studied samples | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
MDR1 promoter Hypomethylation conferred its up-regulation and indicated poor prognosis in patients with and without bone marrow transplantation. | ||||
Invasive ductal breast carcinoma |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypomethylation of ABCB1 in invasive ductal breast carcinoma | [ 2 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Related Molecular Changes |
Up regulation of ABCB1 | Experiment Method | Immunohistochemistry | ||
Studied Phenotype |
Invasive ductal breast carcinoma [ ICD-11: 2C61.0] | ||||
Frequency |
47 (47%) out of the 100 studied tumor samples | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
Breast cancer patients with hypomethylated MDR1 promoter in tumors revealed shorter median overall survival (OS) (median OS = 18 months) as compared to patients having methylated MDR1 promoter. | ||||
Lung adenocarcinoma |
7 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of ABCB1 in lung adenocarcinoma | [ 3 ] | |||
Location |
Downstream promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite sequencing | ||
Related Molecular Changes |
Up regulation of ABCB1 | Experiment Method | Western Blot | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Human lung adenocarcinoma cell line (A549) | ||||
Additional Notes |
Hypermethylation of the ABCB1 gene correlated with increased ABCB1 gene expression and that increased ABCB1 gene expression and methylation were associated with the acquisition of resistance to the cisplatin analogue. | ||||
Epigenetic Phenomenon 2 |
Hypermethylation of ABCB1 in lung adenocarcinoma | [ 3 ] | |||
Location |
Downstream promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite sequencing | ||
Related Molecular Changes |
Up regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Human lung adenocarcinoma cell line (A549) | ||||
Additional Notes |
Hypermethylation of the ABCB1 gene correlated with increased ABCB1 gene expression and that increased ABCB1 gene expression and methylation were associated with the acquisition of resistance to the cisplatin analogue. | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in lung adenocarcinoma | [ 23 ] | |||
Location |
5'UTR (cg15759056) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.89E+00 | Statistic Test | p-value: 2.88E-02; Z-score: 4.86E+00 | ||
Methylation in Case |
8.57E-02 (Median) | Methylation in Control | 4.54E-02 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of ABCB1 in lung adenocarcinoma | [ 23 ] | |||
Location |
5'UTR (cg22899422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 3.19E-02; Z-score: -1.46E+00 | ||
Methylation in Case |
7.95E-01 (Median) | Methylation in Control | 8.29E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of ABCB1 in lung adenocarcinoma | [ 23 ] | |||
Location |
5'UTR (cg00862116) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.59E+00 | Statistic Test | p-value: 3.57E-02; Z-score: 7.32E+00 | ||
Methylation in Case |
2.08E-01 (Median) | Methylation in Control | 1.31E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of ABCB1 in lung adenocarcinoma | [ 23 ] | |||
Location |
5'UTR (cg12270822) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.32E+00 | Statistic Test | p-value: 3.65E-02; Z-score: 1.85E+00 | ||
Methylation in Case |
2.59E-01 (Median) | Methylation in Control | 1.12E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of ABCB1 in lung adenocarcinoma | [ 23 ] | |||
Location |
5'UTR (cg09105881) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.31E+00 | Statistic Test | p-value: 4.17E-02; Z-score: 3.36E+00 | ||
Methylation in Case |
1.85E-01 (Median) | Methylation in Control | 1.42E-01 (Median) | ||
Studied Phenotype |
Lung adenocarcinoma [ ICD-11: 2C25.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Cervical cancer |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypomethylation of ABCB1 in cervical cancer | [ 4 ] | |||
Location |
Promoter (13 CpG sites) | ||||
Epigenetic Type |
Methylation | Experiment Method | MALDI-TOF MS | ||
Related Molecular Changes |
Up regulation of ABCB1 | Experiment Method | Immunohistochemistry | ||
Studied Phenotype |
Cervical cancer [ ICD-11: 2C77.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
The methylation rate of CpG_2, 3, and 4 loci before chemotherapy in patients with effective chemotherapy was higher than patients with ineffective chemotherapy, and there was no difference in the methylation rate among the other CpG loci (P>0.05). | ||||
Malaria |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypomethylation of ABCB1 in malaria | [ 5 ] | |||
Location |
Downstream promoter (+245 to +679 bp) | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite sequencing | ||
Related Molecular Changes |
Up regulation of ABCB1 | Experiment Method | Western Blot | ||
Studied Phenotype |
Malaria [ ICD-11: 1F40] | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
Hypomethylation of downstream promoter region of ABCB1 results higher expression of ABCB1 protein in complicated malarial group. | ||||
Pancreatic cancer |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypomethylation of ABCB1 in pancreatic cancer | [ 6 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite sequencing | ||
Related Molecular Changes |
Up regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Pancreatic cancer [ ICD-11: 2C10] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
ABCB1 expression correlated with pancreatic cancer tumorigenesis and drug resistance in a mechanism that is independent of promoter methylation. | ||||
Adult acute lymphocytic leukemia |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of ABCB1 in adult acute lymphocytic leukemia | [ 7 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | Immunohistochemistry | ||
Studied Phenotype |
Adult acute lymphocytic leukemia [ ICD-11: 2A82] | ||||
Frequency |
16% of the studied tumor samples | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
There is an excellent correlation between ABCB1 methylation and ABCB1 protein expression. | ||||
Breast cancer |
18 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of ABCB1 in breast cancer | [ 8 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite sequencing | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Frequency |
70% of the studied tumor samples | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
Methylation at the ABCB1 promoter improved overall survival probably due to prolonged availability and activity of the drug in the cell. | ||||
Epigenetic Phenomenon 2 |
Hypermethylation of ABCB1 in breast cancer | [ 9 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite pyrosequencing | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | Microarrays | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Frequency |
>75% of the studied tumor samples | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
The ABCB1 promoter was more frequently methylated in tumor tissues than in tumor-adjacent and tumor-distant tissues. | ||||
Epigenetic Phenomenon 3 |
Hypermethylation of ABCB1 in breast cancer | [ 12 ] | |||
Location |
Promoter (-100 to +500 bp) | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite sequencing | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Human breast adenocarcinoma cell line (MCF-7) | ||||
Additional Notes |
ABCB1 promoter Hypermethylation is association with ABCB1 low expression in MCF-7 cell line. | ||||
Epigenetic Phenomenon 4 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
5'UTR (cg12270822) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.42E+00 | Statistic Test | p-value: 4.58E-09; Z-score: 1.28E+00 | ||
Methylation in Case |
1.22E-01 (Median) | Methylation in Control | 8.60E-02 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
5'UTR (cg06562372) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.21E+00 | Statistic Test | p-value: 7.58E-09; Z-score: 1.27E+00 | ||
Methylation in Case |
1.51E-01 (Median) | Methylation in Control | 1.25E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
5'UTR (cg27507700) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.53E+00 | Statistic Test | p-value: 9.74E-09; Z-score: 1.81E+00 | ||
Methylation in Case |
8.47E-02 (Median) | Methylation in Control | 5.54E-02 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
5'UTR (cg09105881) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.36E+00 | Statistic Test | p-value: 1.38E-08; Z-score: 1.52E+00 | ||
Methylation in Case |
1.25E-01 (Median) | Methylation in Control | 9.21E-02 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
5'UTR (cg00862116) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.46E+00 | Statistic Test | p-value: 2.67E-08; Z-score: 1.14E+00 | ||
Methylation in Case |
9.86E-02 (Median) | Methylation in Control | 6.76E-02 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
5'UTR (cg16772035) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.32E+00 | Statistic Test | p-value: 2.13E-07; Z-score: 1.24E+00 | ||
Methylation in Case |
8.59E-02 (Median) | Methylation in Control | 6.50E-02 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
5'UTR (cg00141548) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.26E+00 | Statistic Test | p-value: 2.75E-07; Z-score: 1.28E+00 | ||
Methylation in Case |
1.43E-01 (Median) | Methylation in Control | 1.13E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
5'UTR (cg15759056) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.54E+00 | Statistic Test | p-value: 6.17E-07; Z-score: 1.03E+00 | ||
Methylation in Case |
4.38E-02 (Median) | Methylation in Control | 2.86E-02 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 12 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
5'UTR (cg16288248) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.24E+00 | Statistic Test | p-value: 1.10E-05; Z-score: 8.79E-01 | ||
Methylation in Case |
6.53E-02 (Median) | Methylation in Control | 5.24E-02 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 13 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
5'UTR (cg22899422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 8.70E-05; Z-score: -7.35E-01 | ||
Methylation in Case |
7.48E-01 (Median) | Methylation in Control | 7.78E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 14 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
Body (cg19861260) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.56E+00 | Statistic Test | p-value: 1.35E-12; Z-score: -2.40E+00 | ||
Methylation in Case |
4.10E-01 (Median) | Methylation in Control | 6.39E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 15 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
Body (cg14319793) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.11E+00 | Statistic Test | p-value: 1.08E-08; Z-score: -1.80E+00 | ||
Methylation in Case |
7.58E-01 (Median) | Methylation in Control | 8.40E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 16 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
Body (cg25477497) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.15E+00 | Statistic Test | p-value: 7.48E-05; Z-score: -9.95E-01 | ||
Methylation in Case |
5.40E-01 (Median) | Methylation in Control | 6.21E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 17 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
Body (cg24138422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.06E+00 | Statistic Test | p-value: 4.42E-02; Z-score: -3.26E-01 | ||
Methylation in Case |
8.09E-01 (Median) | Methylation in Control | 8.53E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 18 |
Methylation of ABCB1 in breast cancer | [ 17 ] | |||
Location |
Body (cg23479988) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.09E+00 | Statistic Test | p-value: 4.87E-02; Z-score: -5.53E-01 | ||
Methylation in Case |
7.74E-01 (Median) | Methylation in Control | 8.41E-01 (Median) | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Invasive ductal carcinoma of breast |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of ABCB1 in Invasive ductal carcinoma of breast | [ 10 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite pyrosequencing | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-PCR | ||
Studied Phenotype |
Invasive ductal carcinoma of breast [ ICD-11: 2C61.0] | ||||
Frequency |
40% of the studied tumor samples | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
DNA methylation levels of ABCB1 was higher in oestrogen receptor (ER) positive vs. ER negative tumours; whereas methylation levels of ABCB1 was lower in tumours with a TP53 mutation. | ||||
Prostate cancer |
8 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of ABCB1 in prostate cancer | [ 11 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Frequency |
72% of the studied tumor samples | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
Promoter methylation of ABCB1 predominantly occurred in PCa and was rarely detected in NPT (p < 0.001). | ||||
Epigenetic Phenomenon 2 |
Methylation of ABCB1 in prostate cancer | [ 28 ] | |||
Location |
TSS1500 (cg22844229) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.82E+00 | Statistic Test | p-value: 1.43E-02; Z-score: -1.77E+00 | ||
Methylation in Case |
2.42E-01 (Median) | Methylation in Control | 4.40E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in prostate cancer | [ 28 ] | |||
Location |
TSS1500 (cg22117918) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.46E+00 | Statistic Test | p-value: 3.71E-02; Z-score: -4.52E+00 | ||
Methylation in Case |
1.69E-01 (Median) | Methylation in Control | 2.48E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of ABCB1 in prostate cancer | [ 28 ] | |||
Location |
TSS1500 (cg02322908) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.75E+00 | Statistic Test | p-value: 4.52E-02; Z-score: 4.67E+00 | ||
Methylation in Case |
2.28E-01 (Median) | Methylation in Control | 1.30E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of ABCB1 in prostate cancer | [ 28 ] | |||
Location |
Body (cg16614288) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.23E+00 | Statistic Test | p-value: 3.88E-02; Z-score: 1.81E+00 | ||
Methylation in Case |
8.33E-01 (Median) | Methylation in Control | 6.78E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of ABCB1 in prostate cancer | [ 28 ] | |||
Location |
Body (cg27005847) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.33E+00 | Statistic Test | p-value: 4.00E-02; Z-score: -1.52E+00 | ||
Methylation in Case |
4.31E-01 (Median) | Methylation in Control | 5.73E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of ABCB1 in prostate cancer | [ 28 ] | |||
Location |
Body (cg16374080) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.09E+00 | Statistic Test | p-value: 4.14E-02; Z-score: 1.64E+00 | ||
Methylation in Case |
8.63E-01 (Median) | Methylation in Control | 7.90E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of ABCB1 in prostate cancer | [ 28 ] | |||
Location |
3'UTR (cg24042313) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.48E+00 | Statistic Test | p-value: 4.03E-02; Z-score: 6.93E+00 | ||
Methylation in Case |
6.32E-01 (Median) | Methylation in Control | 4.26E-01 (Median) | ||
Studied Phenotype |
Prostate cancer [ ICD-11: 2C82] | ||||
Experimental Material |
Patient tissue samples | ||||
Newborns with tetralogy of fallot |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of ABCB1 in newborns with tetralogy of fallot | [ 13 ] | |||
Location |
cg25477497 | ||||
Epigenetic Type |
Methylation | Experiment Method | HumanMethylation450 BeadChip | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | GDAC database | ||
Studied Phenotype |
Newborns with tetralogy of fallot [ ICD-11: LA88.2] | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
ABCB1 is differentially methylated in the blood DNA of newborns with TOF compared with controls. | ||||
Glioblastoma multiforme |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of ABCB1 in glioblastoma multiforme | [ 14 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite pyrosequencing | ||
Related Molecular Changes |
level of ABCB1 Unchanged | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Glioblastoma multiforme [ ICD-11: 2A00.00] | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
No association between ABCB1 promoter methylation and ABCB1 expression or overall survival was seen. | ||||
Atypical teratoid rhabdoid tumor |
12 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of ABCB1 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
5'UTR (cg00141548) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.15E+00 | Statistic Test | p-value: 3.99E-09; Z-score: -1.49E+00 | ||
Methylation in Case |
6.88E-01 (Median) | Methylation in Control | 7.91E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of ABCB1 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
5'UTR (cg00862116) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.10E+00 | Statistic Test | p-value: 6.82E-09; Z-score: -1.38E+00 | ||
Methylation in Case |
5.18E-01 (Median) | Methylation in Control | 5.68E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
5'UTR (cg04099454) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.28E+00 | Statistic Test | p-value: 2.59E-08; Z-score: 1.54E+00 | ||
Methylation in Case |
8.14E-01 (Median) | Methylation in Control | 6.34E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of ABCB1 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
5'UTR (cg06562372) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 6.25E-08; Z-score: -1.67E+00 | ||
Methylation in Case |
8.34E-01 (Median) | Methylation in Control | 8.71E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of ABCB1 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
5'UTR (cg09105881) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.12E+00 | Statistic Test | p-value: 1.59E-07; Z-score: -1.24E+00 | ||
Methylation in Case |
7.86E-01 (Median) | Methylation in Control | 8.82E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of ABCB1 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
5'UTR (cg12270822) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.22E+00 | Statistic Test | p-value: 3.67E-07; Z-score: 1.01E+00 | ||
Methylation in Case |
8.66E-01 (Median) | Methylation in Control | 7.07E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of ABCB1 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
5'UTR (cg15759056) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.54E+00 | Statistic Test | p-value: 1.59E-06; Z-score: 1.30E+00 | ||
Methylation in Case |
6.25E-01 (Median) | Methylation in Control | 4.05E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of ABCB1 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
5'UTR (cg16288248) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.89E+00 | Statistic Test | p-value: 1.74E-06; Z-score: -1.17E+00 | ||
Methylation in Case |
1.91E-01 (Median) | Methylation in Control | 3.61E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of ABCB1 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
5'UTR (cg16772035) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.06E+00 | Statistic Test | p-value: 1.84E-06; Z-score: -9.22E-01 | ||
Methylation in Case |
8.39E-01 (Median) | Methylation in Control | 8.89E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of ABCB1 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
5'UTR (cg22899422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.18E+00 | Statistic Test | p-value: 6.55E-06; Z-score: -6.93E-01 | ||
Methylation in Case |
5.25E-01 (Median) | Methylation in Control | 6.18E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of ABCB1 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
5'UTR (cg27507700) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.09E+00 | Statistic Test | p-value: 1.40E-05; Z-score: -9.46E-01 | ||
Methylation in Case |
7.40E-01 (Median) | Methylation in Control | 8.08E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 12 |
Methylation of ABCB1 in atypical teratoid rhabdoid tumor | [ 15 ] | |||
Location |
Body (cg14319793) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.03E+00 | Statistic Test | p-value: 4.49E-02; Z-score: -3.72E-01 | ||
Methylation in Case |
9.01E-01 (Median) | Methylation in Control | 9.29E-01 (Median) | ||
Studied Phenotype |
Atypical teratoid rhabdoid tumor [ ICD-11: 2A00.1Y] | ||||
Experimental Material |
Patient tissue samples | ||||
Bladder cancer |
16 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
5'UTR (cg04099454) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -2.25E+00 | Statistic Test | p-value: 3.97E-11; Z-score: -5.54E+01 | ||
Methylation in Case |
4.11E-01 (Median) | Methylation in Control | 9.24E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
5'UTR (cg22899422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.57E+00 | Statistic Test | p-value: 1.65E-07; Z-score: -2.74E+01 | ||
Methylation in Case |
5.21E-01 (Median) | Methylation in Control | 8.16E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
5'UTR (cg16772035) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.90E+00 | Statistic Test | p-value: 1.62E-04; Z-score: 9.95E+00 | ||
Methylation in Case |
1.39E-01 (Median) | Methylation in Control | 7.32E-02 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
5'UTR (cg16288248) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.47E+00 | Statistic Test | p-value: 6.46E-04; Z-score: 2.76E+00 | ||
Methylation in Case |
8.15E-02 (Median) | Methylation in Control | 5.53E-02 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
5'UTR (cg00141548) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.40E+00 | Statistic Test | p-value: 8.47E-04; Z-score: 3.64E+00 | ||
Methylation in Case |
1.64E-01 (Median) | Methylation in Control | 1.17E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
5'UTR (cg09105881) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.50E+00 | Statistic Test | p-value: 1.62E-03; Z-score: 4.85E+00 | ||
Methylation in Case |
1.38E-01 (Median) | Methylation in Control | 9.19E-02 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
5'UTR (cg27507700) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.53E+00 | Statistic Test | p-value: 2.28E-03; Z-score: 6.16E+00 | ||
Methylation in Case |
8.75E-02 (Median) | Methylation in Control | 5.72E-02 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
5'UTR (cg15759056) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.90E+00 | Statistic Test | p-value: 4.36E-03; Z-score: 7.20E+00 | ||
Methylation in Case |
5.76E-02 (Median) | Methylation in Control | 3.03E-02 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
5'UTR (cg12270822) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.38E+00 | Statistic Test | p-value: 5.21E-03; Z-score: 2.21E+00 | ||
Methylation in Case |
1.23E-01 (Median) | Methylation in Control | 8.91E-02 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
5'UTR (cg06562372) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 8.22E-03; Z-score: -2.73E-01 | ||
Methylation in Case |
1.56E-01 (Median) | Methylation in Control | 1.58E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
5'UTR (cg00862116) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.25E+00 | Statistic Test | p-value: 1.20E-02; Z-score: 1.76E+00 | ||
Methylation in Case |
9.22E-02 (Median) | Methylation in Control | 7.35E-02 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 12 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
Body (cg14319793) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.26E+00 | Statistic Test | p-value: 1.29E-06; Z-score: -6.15E+00 | ||
Methylation in Case |
6.92E-01 (Median) | Methylation in Control | 8.73E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 13 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
Body (cg19861260) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.91E+00 | Statistic Test | p-value: 8.55E-06; Z-score: -8.13E+00 | ||
Methylation in Case |
2.33E-01 (Median) | Methylation in Control | 4.45E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 14 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
Body (cg24138422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.14E+00 | Statistic Test | p-value: 2.26E-03; Z-score: -6.38E+00 | ||
Methylation in Case |
7.15E-01 (Median) | Methylation in Control | 8.17E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 15 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
Body (cg25477497) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.17E+00 | Statistic Test | p-value: 9.48E-03; Z-score: -2.09E+00 | ||
Methylation in Case |
5.29E-01 (Median) | Methylation in Control | 6.20E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 16 |
Methylation of ABCB1 in bladder cancer | [ 16 ] | |||
Location |
Body (cg23479988) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.05E+00 | Statistic Test | p-value: 1.18E-02; Z-score: -1.76E+00 | ||
Methylation in Case |
7.49E-01 (Median) | Methylation in Control | 7.90E-01 (Median) | ||
Studied Phenotype |
Bladder cancer [ ICD-11: 2C94] | ||||
Experimental Material |
Patient tissue samples | ||||
Renal cell carcinoma |
3 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of ABCB1 in clear cell renal cell carcinoma | [ 18 ] | |||
Location |
5'UTR (cg00141548) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.58E+00 | Statistic Test | p-value: 5.64E-04; Z-score: -7.53E-01 | ||
Methylation in Case |
6.12E-02 (Median) | Methylation in Control | 9.65E-02 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of ABCB1 in clear cell renal cell carcinoma | [ 18 ] | |||
Location |
Body (cg25477497) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.24E+00 | Statistic Test | p-value: 3.97E-04; Z-score: -2.29E+00 | ||
Methylation in Case |
4.99E-01 (Median) | Methylation in Control | 6.19E-01 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in clear cell renal cell carcinoma | [ 18 ] | |||
Location |
Body (cg19861260) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.39E+00 | Statistic Test | p-value: 4.16E-03; Z-score: -1.64E+00 | ||
Methylation in Case |
3.36E-01 (Median) | Methylation in Control | 4.69E-01 (Median) | ||
Studied Phenotype |
Renal cell carcinoma [ ICD-11: 2C90] | ||||
Experimental Material |
Patient tissue samples | ||||
Colorectal cancer |
16 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
5'UTR (cg04099454) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.25E+00 | Statistic Test | p-value: 2.79E-09; Z-score: -3.46E+00 | ||
Methylation in Case |
6.58E-01 (Median) | Methylation in Control | 8.23E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
5'UTR (cg09105881) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.09E+00 | Statistic Test | p-value: 1.54E-04; Z-score: 3.66E-01 | ||
Methylation in Case |
1.27E-01 (Median) | Methylation in Control | 1.16E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
5'UTR (cg27507700) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.16E+00 | Statistic Test | p-value: 1.75E-04; Z-score: 5.19E-01 | ||
Methylation in Case |
8.79E-02 (Median) | Methylation in Control | 7.60E-02 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
5'UTR (cg22899422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 2.19E-04; Z-score: -1.36E+00 | ||
Methylation in Case |
8.80E-01 (Median) | Methylation in Control | 9.17E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
5'UTR (cg06562372) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.12E+00 | Statistic Test | p-value: 3.39E-04; Z-score: 5.07E-01 | ||
Methylation in Case |
8.65E-02 (Median) | Methylation in Control | 7.74E-02 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
5'UTR (cg12270822) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.07E+00 | Statistic Test | p-value: 4.08E-04; Z-score: 2.20E-01 | ||
Methylation in Case |
1.06E-01 (Median) | Methylation in Control | 9.90E-02 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
5'UTR (cg00141548) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.21E+00 | Statistic Test | p-value: 4.10E-04; Z-score: 6.59E-01 | ||
Methylation in Case |
1.51E-01 (Median) | Methylation in Control | 1.25E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
5'UTR (cg16288248) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 2.17E-03; Z-score: -8.40E-02 | ||
Methylation in Case |
1.07E-01 (Median) | Methylation in Control | 1.09E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
5'UTR (cg15759056) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.09E+00 | Statistic Test | p-value: 2.34E-03; Z-score: -1.50E-01 | ||
Methylation in Case |
2.16E-02 (Median) | Methylation in Control | 2.34E-02 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
5'UTR (cg00862116) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 2.73E-03; Z-score: -4.18E-02 | ||
Methylation in Case |
9.36E-02 (Median) | Methylation in Control | 9.54E-02 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
5'UTR (cg16772035) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.01E+00 | Statistic Test | p-value: 3.28E-03; Z-score: 3.76E-02 | ||
Methylation in Case |
1.08E-01 (Median) | Methylation in Control | 1.07E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 12 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
Body (cg25477497) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.80E+00 | Statistic Test | p-value: 2.90E-08; Z-score: -2.04E+00 | ||
Methylation in Case |
4.10E-01 (Median) | Methylation in Control | 7.37E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 13 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
Body (cg19861260) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.96E+00 | Statistic Test | p-value: 6.91E-06; Z-score: -1.70E+00 | ||
Methylation in Case |
2.34E-01 (Median) | Methylation in Control | 4.59E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 14 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
Body (cg23479988) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 3.57E-04; Z-score: -1.53E+00 | ||
Methylation in Case |
8.75E-01 (Median) | Methylation in Control | 9.10E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 15 |
Methylation of ABCB1 in colorectal cancer | [ 19 ] | |||
Location |
Body (cg24138422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.00E+00 | Statistic Test | p-value: 6.68E-03; Z-score: -1.71E-01 | ||
Methylation in Case |
9.21E-01 (Median) | Methylation in Control | 9.25E-01 (Median) | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 16 |
Hypermethylation of ABCB1 in colorectal cancer | [ 47 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite sequencing | ||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Frequency |
69% of the studied tumor samples | ||||
Experimental Material |
Korean patient tissue samples | ||||
Additional Notes |
The Hypermethylation of ABCB1 in cancer tissues was not significantly associated with any clinical parameters. | ||||
Depression |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of ABCB1 in depression | [ 20 ] | |||
Location |
5'UTR (cg00862116) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.09E+00 | Statistic Test | p-value: 4.70E-02; Z-score: 5.25E-01 | ||
Methylation in Case |
5.23E-02 (Median) | Methylation in Control | 4.80E-02 (Median) | ||
Studied Phenotype |
Depression [ ICD-11: 6A8Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Hepatocellular carcinoma |
13 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
5'UTR (cg00141548) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.20E+00 | Statistic Test | p-value: 1.21E-07; Z-score: -1.16E+00 | ||
Methylation in Case |
9.07E-02 (Median) | Methylation in Control | 1.09E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
5'UTR (cg12270822) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.12E+00 | Statistic Test | p-value: 8.63E-04; Z-score: -5.36E-01 | ||
Methylation in Case |
6.11E-02 (Median) | Methylation in Control | 6.86E-02 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
5'UTR (cg27507700) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.13E+00 | Statistic Test | p-value: 2.34E-03; Z-score: -8.69E-01 | ||
Methylation in Case |
5.26E-02 (Median) | Methylation in Control | 5.92E-02 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
5'UTR (cg00862116) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.15E+00 | Statistic Test | p-value: 2.53E-03; Z-score: -4.81E-01 | ||
Methylation in Case |
5.88E-02 (Median) | Methylation in Control | 6.78E-02 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
5'UTR (cg04099454) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.03E+00 | Statistic Test | p-value: 4.73E-03; Z-score: -1.96E-01 | ||
Methylation in Case |
8.50E-01 (Median) | Methylation in Control | 8.74E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
5'UTR (cg22899422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 3.59E-02; Z-score: -1.66E-01 | ||
Methylation in Case |
8.09E-01 (Median) | Methylation in Control | 8.15E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
TSS1500 (cg13362272) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.18E+00 | Statistic Test | p-value: 6.67E-11; Z-score: -4.26E+00 | ||
Methylation in Case |
7.56E-01 (Median) | Methylation in Control | 8.94E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
TSS1500 (cg20038225) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.18E+00 | Statistic Test | p-value: 7.98E-11; Z-score: -3.31E+00 | ||
Methylation in Case |
6.83E-01 (Median) | Methylation in Control | 8.05E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
1stExon (cg12501142) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.16E+00 | Statistic Test | p-value: 2.97E-10; Z-score: -5.15E+00 | ||
Methylation in Case |
7.32E-01 (Median) | Methylation in Control | 8.50E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 10 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
Body (cg23260105) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.19E+00 | Statistic Test | p-value: 3.23E-11; Z-score: -1.15E+01 | ||
Methylation in Case |
8.18E-01 (Median) | Methylation in Control | 9.75E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 11 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
Body (cg25477497) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.30E+00 | Statistic Test | p-value: 1.15E-04; Z-score: -1.05E+00 | ||
Methylation in Case |
2.27E-01 (Median) | Methylation in Control | 2.95E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 12 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
Body (cg19861260) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.40E+00 | Statistic Test | p-value: 7.57E-04; Z-score: -1.41E+00 | ||
Methylation in Case |
1.65E-01 (Median) | Methylation in Control | 2.31E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 13 |
Methylation of ABCB1 in hepatocellular carcinoma | [ 21 ] | |||
Location |
3'UTR (cg23533270) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.45E+00 | Statistic Test | p-value: 1.26E-11; Z-score: -1.65E+00 | ||
Methylation in Case |
4.39E-01 (Median) | Methylation in Control | 6.37E-01 (Median) | ||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Patient tissue samples | ||||
HIV infection |
9 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of ABCB1 in HIV infection | [ 22 ] | |||
Location |
5'UTR (cg00862116) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.30E+00 | Statistic Test | p-value: 6.15E-05; Z-score: 1.14E+00 | ||
Methylation in Case |
5.53E-02 (Median) | Methylation in Control | 4.25E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of ABCB1 in HIV infection | [ 22 ] | |||
Location |
5'UTR (cg16772035) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.31E+00 | Statistic Test | p-value: 5.48E-03; Z-score: 1.64E+00 | ||
Methylation in Case |
8.79E-02 (Median) | Methylation in Control | 6.73E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in HIV infection | [ 22 ] | |||
Location |
5'UTR (cg22899422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.02E+00 | Statistic Test | p-value: 3.31E-02; Z-score: -9.71E-01 | ||
Methylation in Case |
9.07E-01 (Median) | Methylation in Control | 9.28E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of ABCB1 in HIV infection | [ 22 ] | |||
Location |
5'UTR (cg09105881) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.11E+00 | Statistic Test | p-value: 4.24E-02; Z-score: 6.62E-01 | ||
Methylation in Case |
9.70E-02 (Median) | Methylation in Control | 8.75E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of ABCB1 in HIV infection | [ 22 ] | |||
Location |
5'UTR (cg15759056) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.79E+00 | Statistic Test | p-value: 4.30E-02; Z-score: 8.28E-01 | ||
Methylation in Case |
9.18E-03 (Median) | Methylation in Control | 5.12E-03 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of ABCB1 in HIV infection | [ 22 ] | |||
Location |
Body (cg24138422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.03E+00 | Statistic Test | p-value: 3.40E-05; Z-score: 9.93E-01 | ||
Methylation in Case |
9.20E-01 (Median) | Methylation in Control | 8.96E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of ABCB1 in HIV infection | [ 22 ] | |||
Location |
Body (cg25477497) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.27E+00 | Statistic Test | p-value: 1.76E-04; Z-score: 1.20E+00 | ||
Methylation in Case |
8.33E-02 (Median) | Methylation in Control | 6.55E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of ABCB1 in HIV infection | [ 22 ] | |||
Location |
Body (cg19861260) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.39E+00 | Statistic Test | p-value: 3.60E-03; Z-score: 1.13E+00 | ||
Methylation in Case |
1.27E-01 (Median) | Methylation in Control | 9.12E-02 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 9 |
Methylation of ABCB1 in HIV infection | [ 22 ] | |||
Location |
Body (cg14319793) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.03E+00 | Statistic Test | p-value: 1.18E-02; Z-score: -5.41E-01 | ||
Methylation in Case |
9.09E-01 (Median) | Methylation in Control | 9.36E-01 (Median) | ||
Studied Phenotype |
HIV infection [ ICD-11: 1C62.Z] | ||||
Experimental Material |
Patient tissue samples | ||||
Pancretic ductal adenocarcinoma |
8 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of ABCB1 in pancretic ductal adenocarcinoma | [ 24 ] | |||
Location |
5'UTR (cg13765368) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.49E+00 | Statistic Test | p-value: 3.85E-15; Z-score: 2.17E+00 | ||
Methylation in Case |
1.26E-01 (Median) | Methylation in Control | 8.46E-02 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of ABCB1 in pancretic ductal adenocarcinoma | [ 24 ] | |||
Location |
TSS1500 (cg23099740) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.09E+00 | Statistic Test | p-value: 2.70E-09; Z-score: 1.36E+00 | ||
Methylation in Case |
6.57E-01 (Median) | Methylation in Control | 6.05E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in pancretic ductal adenocarcinoma | [ 24 ] | |||
Location |
TSS1500 (cg10017118) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.03E+00 | Statistic Test | p-value: 2.43E-02; Z-score: 3.37E-01 | ||
Methylation in Case |
5.79E-01 (Median) | Methylation in Control | 5.62E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of ABCB1 in pancretic ductal adenocarcinoma | [ 24 ] | |||
Location |
TSS200 (cg11960629) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.10E+00 | Statistic Test | p-value: 1.05E-20; Z-score: 3.72E+00 | ||
Methylation in Case |
1.82E-01 (Median) | Methylation in Control | 8.65E-02 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of ABCB1 in pancretic ductal adenocarcinoma | [ 24 ] | |||
Location |
TSS200 (cg08074851) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 2.79E+00 | Statistic Test | p-value: 2.91E-18; Z-score: 3.35E+00 | ||
Methylation in Case |
3.99E-01 (Median) | Methylation in Control | 1.43E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 6 |
Methylation of ABCB1 in pancretic ductal adenocarcinoma | [ 24 ] | |||
Location |
TSS200 (cg13052102) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.06E+00 | Statistic Test | p-value: 2.11E-02; Z-score: 2.83E-01 | ||
Methylation in Case |
5.30E-02 (Median) | Methylation in Control | 5.02E-02 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 7 |
Methylation of ABCB1 in pancretic ductal adenocarcinoma | [ 24 ] | |||
Location |
Body (cg24334149) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.24E+00 | Statistic Test | p-value: 3.97E-07; Z-score: -1.56E+00 | ||
Methylation in Case |
4.58E-01 (Median) | Methylation in Control | 5.70E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 8 |
Methylation of ABCB1 in pancretic ductal adenocarcinoma | [ 24 ] | |||
Location |
Body (cg05207973) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.10E+00 | Statistic Test | p-value: 5.44E-07; Z-score: 8.56E-01 | ||
Methylation in Case |
6.96E-01 (Median) | Methylation in Control | 6.32E-01 (Median) | ||
Studied Phenotype |
Pancretic ductal adenocarcinoma [ ICD-11: 2C10.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Panic disorder |
5 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of ABCB1 in panic disorder | [ 25 ] | |||
Location |
5'UTR (cg04099454) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.33E+00 | Statistic Test | p-value: 1.67E-02; Z-score: -4.72E-01 | ||
Methylation in Case |
5.42E-01 (Median) | Methylation in Control | 7.22E-01 (Median) | ||
Studied Phenotype |
Panic disorder [ ICD-11: 6B01] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of ABCB1 in panic disorder | [ 25 ] | |||
Location |
5'UTR (cg22899422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.11E+00 | Statistic Test | p-value: 4.18E-02; Z-score: -3.26E-01 | ||
Methylation in Case |
1.08E+00 (Median) | Methylation in Control | 1.20E+00 (Median) | ||
Studied Phenotype |
Panic disorder [ ICD-11: 6B01] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in panic disorder | [ 25 ] | |||
Location |
Body (cg25477497) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 8.60E-01 | Statistic Test | p-value: 2.38E-06; Z-score: 8.27E-01 | ||
Methylation in Case |
-2.53E+00 (Median) | Methylation in Control | -2.94E+00 (Median) | ||
Studied Phenotype |
Panic disorder [ ICD-11: 6B01] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of ABCB1 in panic disorder | [ 25 ] | |||
Location |
Body (cg24138422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.91E+00 | Statistic Test | p-value: 2.54E-04; Z-score: -8.53E-01 | ||
Methylation in Case |
5.17E-01 (Median) | Methylation in Control | 9.85E-01 (Median) | ||
Studied Phenotype |
Panic disorder [ ICD-11: 6B01] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 5 |
Methylation of ABCB1 in panic disorder | [ 25 ] | |||
Location |
Body (cg23479988) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -6.21E-01 | Statistic Test | p-value: 3.15E-02; Z-score: -4.69E-01 | ||
Methylation in Case |
-4.38E-01 (Median) | Methylation in Control | -2.72E-01 (Median) | ||
Studied Phenotype |
Panic disorder [ ICD-11: 6B01] | ||||
Experimental Material |
Patient tissue samples | ||||
Papillary thyroid cancer |
4 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of ABCB1 in papillary thyroid cancer | [ 26 ] | |||
Location |
5'UTR (cg22899422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.05E+00 | Statistic Test | p-value: 4.89E-08; Z-score: -1.58E+00 | ||
Methylation in Case |
8.63E-01 (Median) | Methylation in Control | 9.05E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of ABCB1 in papillary thyroid cancer | [ 26 ] | |||
Location |
5'UTR (cg16772035) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.20E+00 | Statistic Test | p-value: 4.41E-03; Z-score: 7.40E-01 | ||
Methylation in Case |
8.02E-02 (Median) | Methylation in Control | 6.70E-02 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in papillary thyroid cancer | [ 26 ] | |||
Location |
5'UTR (cg09105881) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.08E+00 | Statistic Test | p-value: 3.23E-02; Z-score: 4.29E-01 | ||
Methylation in Case |
9.18E-02 (Median) | Methylation in Control | 8.54E-02 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 4 |
Methylation of ABCB1 in papillary thyroid cancer | [ 26 ] | |||
Location |
Body (cg25477497) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.04E+00 | Statistic Test | p-value: 4.92E-03; Z-score: -4.57E-01 | ||
Methylation in Case |
8.08E-01 (Median) | Methylation in Control | 8.42E-01 (Median) | ||
Studied Phenotype |
Papillary thyroid cancer [ ICD-11: 2D10.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Systemic lupus erythematosus |
3 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of ABCB1 in systemic lupus erythematosus | [ 27 ] | |||
Location |
5'UTR (cg22899422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 4.14E-02; Z-score: -2.60E-01 | ||
Methylation in Case |
8.92E-01 (Median) | Methylation in Control | 9.02E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of ABCB1 in systemic lupus erythematosus | [ 27 ] | |||
Location |
Body (cg25477497) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: 1.07E+00 | Statistic Test | p-value: 2.74E-02; Z-score: 1.95E-01 | ||
Methylation in Case |
9.84E-02 (Median) | Methylation in Control | 9.23E-02 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in systemic lupus erythematosus | [ 27 ] | |||
Location |
Body (cg24138422) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.01E+00 | Statistic Test | p-value: 4.61E-02; Z-score: -1.99E-01 | ||
Methylation in Case |
9.15E-01 (Median) | Methylation in Control | 9.20E-01 (Median) | ||
Studied Phenotype |
Systemic lupus erythematosus [ ICD-11: 4A40.0] | ||||
Experimental Material |
Patient tissue samples | ||||
Colon cancer |
3 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Methylation of ABCB1 in colon adenocarcinoma | [ 29 ] | |||
Location |
Body (cg24474319) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.16E+00 | Statistic Test | p-value: 9.45E-05; Z-score: -2.54E+00 | ||
Methylation in Case |
4.82E-01 (Median) | Methylation in Control | 5.60E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 2 |
Methylation of ABCB1 in colon adenocarcinoma | [ 29 ] | |||
Location |
Body (cg10860553) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.24E+00 | Statistic Test | p-value: 1.26E-04; Z-score: -3.46E+00 | ||
Methylation in Case |
4.74E-01 (Median) | Methylation in Control | 5.89E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
Methylation of ABCB1 in colon adenocarcinoma | [ 29 ] | |||
Location |
Body (cg16793755) | ||||
Epigenetic Type |
Methylation | Experiment Method | Infinium HumanMethylation450 BeadChip | ||
Methylation Fold Change |
Fold Change: -1.15E+00 | Statistic Test | p-value: 6.76E-04; Z-score: -2.17E+00 | ||
Methylation in Case |
6.13E-01 (Median) | Methylation in Control | 7.07E-01 (Median) | ||
Studied Phenotype |
Colon cancer [ ICD-11: 2B90] | ||||
Experimental Material |
Patient tissue samples | ||||
Adult acute myeloid leukemia |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of ABCB1 in adult acute myeloid leukemia | [ 46 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-sensitive melting curve analysis | ||
Studied Phenotype |
Adult acute myeloid leukemia [ ICD-11: 2A60] | ||||
Frequency |
11 (4%) out of the 287 studied tumor samples | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
There is a difference of methylation of ABCB1 between childhood and adult AML. | ||||
Childhood acute myeloid leukemia |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of ABCB1 in childhood acute myeloid leukemia | [ 46 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-sensitive melting curve analysis | ||
Studied Phenotype |
Childhood acute myeloid leukemia [ ICD-11: 2A60] | ||||
Frequency |
5 (8%) out of the 66 studied tumor samples | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
No significant impact on prognosis was seen for promoter Hypermethylation in ABCB1. | ||||
Gastric cancer |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of ABCB1 in gastric carcinogenesis | [ 48 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Studied Phenotype |
Gastric cancer [ ICD-11: 2B72] | ||||
Frequency |
31% of the studied tumor samples | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
The methylation ratio (MR) of the cancer lesions (31.3 +/- 20.5) was significantly higher than that of non non-neoplastic mucosa (20.9 +/- 31.3, p = 0.0004). | ||||
Non-small cell lung cancer |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypermethylation of ABCB1 in non-small cell lung cancer | [ 49 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Methylation-specific PCR | ||
Studied Phenotype |
Non-small cell lung cancer [ ICD-11: 2C25.4] | ||||
Frequency |
31 (24%) out of the 124 studied tumor samples | ||||
Experimental Material |
Chinese patient tissue samples | ||||
Additional Notes |
The frequency of methylation of ABCB1 is disparity between the mainland of China and the United States in the NSCLC populations. | ||||
Intracranial artery stenosis |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypomethylation of ABCB1 in intracranial artery stenosis | [ 50 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Methylation | Experiment Method | Bisulfite sequencing | ||
Studied Phenotype |
Intracranial artery stenosis [ ICD-11: BD55] | ||||
Experimental Material |
Chinese patient tissue samples | ||||
Additional Notes |
ABCB1 promoter methylation is association with aspirin exposure, platelet function, and clinical outcomes in Chinese intracranial artery stenosis patients. | ||||
Histone acetylation |
|||||
Acute myeloid leukemia |
2 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypoacetylation of ABCB1 in acute myeloid leukemia (compare with valproate-treatment counterpart AML cells) | [ 30 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Histone acetylation | Experiment Method | Chromatin immunoprecipitation | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Acute myeloid leukemia [ ICD-11: 2A60] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
Chromatin immunoprecipitation revealed the hyperacetylation of histone proteins in the promoter regions of MDR1 on valproate treatment. | ||||
Epigenetic Phenomenon 2 |
Hypoacetylation of ABCB1 in AML (compare with valproate treatment counterpart cells) | [ 30 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Histone acetylation | Experiment Method | Chromatin immunoprecipitation | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | Western Blot | ||
Studied Phenotype |
Acute myeloid leukemia [ ICD-11: 2A60] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
Hyperacetylation of histone proteins in the promoter regions of MDR1 on valproate treatment. | ||||
Breast cancer |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypoacetylation of ABCB1 in breast cancer (compare with doxorubicin-resistant counterpart cells) | [ 31 ] | |||
Location |
Promoter | ||||
Epigenetic Type |
Histone acetylation | Experiment Method | Chromatin immunoprecipitation | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
Elevated level of lysine 9-acetylated histone H3 at the MDR1 promoter in doxorubicinresistant MCF-7 cells. | ||||
Lymphoma |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypoacetylation of ABCB1 in lymphoid tumour (compare with etoposide-resistant counterpart cells) | [ 32 ] | |||
Location |
Exon 1 | ||||
Epigenetic Type |
Histone acetylation | Experiment Method | Chromatin immunoprecipitation | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Lymphoma [ ICD-11: 2B30] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
Histone H3 acetylation in the same CpG island was significantly increased in drug-resistant cell line. | ||||
Sarcoma |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypoacetylation of ABCB1 in sarcoma (compare with multidrug-resistant counterpart cells) | [ 33 ] | |||
Location |
968 bp upstream of exon 1 | ||||
Epigenetic Type |
Histone acetylation | Experiment Method | Chromatin immunoprecipitation | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Sarcoma [ ICD-11: 2A60.39] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
The chromatin structure of the ABCB1 upstream promoter is changed via acetylation of histone H3 initiating ABCB1 activation. | ||||
Small cell lung cancer |
5 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) | [ 34 ] | |||
Location |
Distal promoter (-981 to -817) | ||||
Epigenetic Type |
Histone acetylation | Experiment Method | Chromatin immunoprecipitation | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Small cell lung cancer [ ICD-11: 2C25.1] | ||||
Experimental Material |
Human small cell lung carcinoma cell line (H69) | ||||
Additional Notes |
High acetylation level of histone H3 of ABCB1 in etoposide-resistant small cell lung carcinoma associated with higher ABCB1 expression. | ||||
Epigenetic Phenomenon 2 |
Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) | [ 34 ] | |||
Location |
Promoter (-981 to -817 and -222 to +37) | ||||
Epigenetic Type |
Histone acetylation | Experiment Method | Chromatin immunoprecipitation | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Small cell lung cancer [ ICD-11: 2C25.1] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
TSA induces downregulation of ABCB1 expression in drug-resistant SCLC cell line, independently of promoter methylation, and MBD1 or PCAF recruitment. | ||||
Epigenetic Phenomenon 3 |
Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) | [ 34 ] | |||
Location |
Promoter (-981 to -817 and -222 to +37) | ||||
Epigenetic Type |
Histone acetylation | Experiment Method | Chromatin immunoprecipitation | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Small cell lung cancer [ ICD-11: 2C25.1] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
TSA induces downregulation of ABCB1 expression in drug-resistant SCLC cell line, independently of promoter methylation, and MBD1 or PCAF recruitment. | ||||
Epigenetic Phenomenon 4 |
Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) | [ 34 ] | |||
Location |
Proximal promoter (+292 to +591) | ||||
Epigenetic Type |
Histone acetylation | Experiment Method | Chromatin immunoprecipitation | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Small cell lung cancer [ ICD-11: 2C25.1] | ||||
Experimental Material |
Human small cell lung carcinoma cell line (H69) | ||||
Additional Notes |
High acetylation level of histone H3 of ABCB1 in etoposide-resistant small cell lung carcinoma associated with higher ABCB1 expression. | ||||
Epigenetic Phenomenon 5 |
Hypoacetylation of ABCB1 in SCLC (compare with etoposide-resistant counterpart cells) | [ 34 ] | |||
Location |
Proximal promoter (+292 to +591) | ||||
Epigenetic Type |
Histone acetylation | Experiment Method | Chromatin immunoprecipitation | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Small cell lung cancer [ ICD-11: 2C25.1] | ||||
Experimental Material |
Human small cell lung carcinoma cell line (H69) | ||||
Additional Notes |
High acetylation level of histone H4 of ABCB1 in etoposide-resistant small cell lung carcinoma associated with higher ABCB1 expression. | ||||
Promyeloblastic leukemia |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Hypoacetylation of ABCB1 in promyeloblastic leukemia (compare with valproate-treatment counterpart AML cells) | [ 35 ] | |||
Epigenetic Type |
Histone acetylation | Experiment Method | Chromatin immunoprecipitation | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
Studied Phenotype |
Promyeloblastic leukemia [ ICD-11: 2A60.0] | ||||
Experimental Material |
Human leukemia stem cell-like cell line (KG-1a) | ||||
Additional Notes |
Exposure of promyeloblastic leukemia cells for 24 h to 2 mM of the weak histone deacetylase inhibitor phenylbutyrate resulted in enhanced and marked expression of P-glycoprotein. | ||||
microRNA |
|||||
Gastric cancer |
3 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Higher expression of miR-129-5p in gastric cancer (compare with cisplatin-resistant counterpart cells) | [ 36 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | Western Blot | ||
miRNA Stemloop ID |
miR-129 | miRNA Mature ID | miR-129-5p | ||
miRNA Sequence |
CUUUUUGCGGUCUGGGCUUGC | ||||
miRNA Target Type |
Direct | ||||
Studied Phenotype |
Gastric cancer [ ICD-11: 2B72] | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
miR-129 enhances chemosensitivity to cisplatin by suppressing P-gp protein in GC cells. | ||||
Epigenetic Phenomenon 2 |
Higher expression of miR-508-5p in gastric cancer (compare to multidrug resistance counterpart cells) | [ 41 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | Western Blot | ||
miRNA Stemloop ID |
miR-508 | miRNA Mature ID | miR-508-5p | ||
miRNA Sequence |
UACUCCAGAGGGCGUCACUCAUG | ||||
miRNA Target Type |
Direct | ||||
Studied Phenotype |
Gastric cancer [ ICD-11: 2B72] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
By targeting ABCB1 and ZNRD1, miR-508-5p overexpression decreases the intracellular concentration of chemotherapeutics and promotes drug-induced apoptosis in MDR gastric cancer cells. | ||||
Epigenetic Phenomenon 3 |
miR-129-5p downregulates of ABCB1 in gastric cancer | [ 45 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | Western Blot | ||
miRNA Stemloop ID |
miR-129 | miRNA Mature ID | miR-129-5p | ||
miRNA Sequence |
CUUUUUGCGGUCUGGGCUUGC | ||||
miRNA Target Type |
Direct | ||||
Studied Phenotype |
Gastric cancer [ ICD-11: 2B72] | ||||
Experimental Material |
Human gastric adenocarcinoma cell line (SGC7901) | ||||
Additional Notes |
miR-129-5p reduces ABCB1 expression in vivo at the post-transcriptional level. | ||||
Breast cancer |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Higher expression of miR-137 in breast cancer (compare with multidrug-resistant counterpart cells) | [ 37 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Dual-luciferase reporter assay | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | Western Blot | ||
miRNA Stemloop ID |
miR-137 | miRNA Mature ID | Unclear | ||
miRNA Target Type |
Indirect(YB-1;ABCB1) | ||||
Studied Phenotype |
Breast cancer [ ICD-11: 2C60-2C6Z] | ||||
Experimental Material |
Human breast adenocarcinoma cell line (MCF-7) | ||||
Additional Notes |
miR-137 was involved in MDR in cancer through modulation of P-gp by targeting YB-1. | ||||
Ovarian cancer |
2 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Higher expression of miR-186 in ovarian cancer (compare with cisplatin-resistant counterpart cells) | [ 38 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Dual-luciferase reporter assay | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
miRNA Stemloop ID |
miR-186 | miRNA Mature ID | miR-186-5p | ||
miRNA Sequence |
CAAAGAAUUCUCCUUUUGGGCU | ||||
miRNA Target Type |
Direct | ||||
Studied Phenotype |
Ovarian cancer [ ICD-11: 2C73] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
miR-186 overexpression may increase the sensitivity of ovarian cancer cells to paclitaxel and cisplatin by targeting ABCB1. | ||||
Epigenetic Phenomenon 2 |
Higher expression of miR-186 in ovarian cancer (compare with cisplatin-resistant counterpart cells) | [ 38 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Dual-luciferase reporter assay | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | Western Blot | ||
miRNA Stemloop ID |
miR-186 | miRNA Mature ID | miR-186-5p | ||
miRNA Sequence |
CAAAGAAUUCUCCUUUUGGGCU | ||||
miRNA Target Type |
Direct | ||||
Studied Phenotype |
Ovarian cancer [ ICD-11: 2C73] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
miR-186 overexpression may increase the sensitivity of ovarian cancer cells to paclitaxel and cisplatin by targeting ABCB1. | ||||
Chronic myeloid leukemia |
2 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Higher expression of miR-214 in CML (compare with imatinib mesylate resistant counterpart cells) | [ 39 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Dual-luciferase reporter assay | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | Western Blot | ||
miRNA Stemloop ID |
miR-214 | miRNA Mature ID | miR-214-5p | ||
miRNA Sequence |
UGCCUGUCUACACUUGCUGUGC | ||||
miRNA Target Type |
Direct | ||||
Studied Phenotype |
Chronic myeloid leukemia [ ICD-11: 2B33.1] | ||||
Experimental Material |
Patient tissue samples | ||||
Additional Notes |
Decreased expression of microRNA-214 contributes to imatinib mesylate resistance of chronic myeloid leukemia patients by upregulating ABCB1 gene expression. | ||||
Epigenetic Phenomenon 2 |
Higher expression of miR-9 in CML (compare with adriamycin resistant counterpart cells) | [ 42 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | Western Blot | ||
miRNA Stemloop ID |
miR-9 | miRNA Mature ID | miR-9-3p | ||
miRNA Sequence |
AUAAAGCUAGAUAACCGAAAGU | ||||
miRNA Target Type |
Direct | ||||
Studied Phenotype |
Chronic myeloid leukemia [ ICD-11: 2B33.1] | ||||
Experimental Material |
Patient tissue samples, Multiple cell lines of human | ||||
Additional Notes |
miR-9 and P-glycoprotein (P-gp) had a negative correlation in the CML patients, and the expression of miR-9 was increased in the CML. | ||||
Hepatocellular carcinoma |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Higher expression of miR-223 in HCC (compare with multidrug resistance counterpart cells) | [ 40 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | Western Blot | ||
miRNA Stemloop ID |
miR-223 | miRNA Mature ID | miR-223-3p | ||
miRNA Sequence |
UGUCAGUUUGUCAAAUACCCCA | ||||
miRNA Target Type |
Direct | ||||
Studied Phenotype |
Hepatocellular carcinoma [ ICD-11: 2C12.02] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
miR-223 modulates multidrug resistance via downregulation of ABCB1 in hepatocellular carcinoma cells | ||||
Colorectal cancer |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
Lower expression of miR-491-3p in colorectal cancer (compare to atorvastatin treatment cells) | [ 43 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | RT-qPCR | ||
miRNA Stemloop ID |
miR-491 | miRNA Mature ID | miR-491-3p | ||
miRNA Sequence |
CUUAUGCAAGAUUCCCUUCUAC | ||||
miRNA Target Type |
Direct | ||||
Studied Phenotype |
Colorectal cancer [ ICD-11: 2B91] | ||||
Experimental Material |
Human epithelial colorectal adenocarcinoma cell line(Caco-2) | ||||
Additional Notes |
Atorvastatin attenuation of ABCB1 expression is mediated by microRNA miR-491-3p in Caco-2 cells. | ||||
Acute myeloid leukemia |
1 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
miR-1-3p downregulates of ABCB1 in acute myeloid leukemia | [ 44 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay | ||
Related Molecular Changes |
Down regulation of ABCB1 | Experiment Method | Western Blot | ||
miRNA Stemloop ID |
miR-1 | miRNA Mature ID | miR-1-3p | ||
miRNA Sequence |
UGGAAUGUAAAGAAGUAUGUAU | ||||
miRNA Target Type |
Direct | ||||
Studied Phenotype |
Acute myeloid leukemia [ ICD-11: 2A60] | ||||
Experimental Material |
Multiple cell lines of human | ||||
Additional Notes |
PI3K/mTOR dual inhibitor BEZ235 effectively chemosensitizes AML cells via increasing miR-1-3p and subsequently down-regulating BAG4, EDN1 and ABCB1. | ||||
Unclear Phenotype |
7 Epigenetic Phenomena Related to This Phenotype | Click to Show/Hide the Full List | |||
Epigenetic Phenomenon 1 |
miR-1 directly targets ABCB1 | [ 44 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay//qRT-PCR | ||
miRNA Stemloop ID |
miR-1 | miRNA Mature ID | miR-1-3p | ||
miRNA Sequence |
UGGAAUGUAAAGAAGUAUGUAU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 2 |
miR-129 directly targets ABCB1 | [ 36 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay//qRT-PCR//Western blot | ||
miRNA Stemloop ID |
miR-129 | miRNA Mature ID | miR-129-5p | ||
miRNA Sequence |
CUUUUUGCGGUCUGGGCUUGC | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Patient tissue samples | ||||
Epigenetic Phenomenon 3 |
miR-186 directly targets ABCB1 | [ 38 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay | ||
miRNA Stemloop ID |
miR-186 | miRNA Mature ID | miR-186-5p | ||
miRNA Sequence |
CAAAGAAUUCUCCUUUUGGGCU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 4 |
miR-223 directly targets ABCB1 | [ 40 ] | |||
Epigenetic Type |
microRNA | Experiment Method | GFP reporter assay//qRT-PCR//Western blot | ||
miRNA Stemloop ID |
miR-223 | miRNA Mature ID | miR-223-3p | ||
miRNA Sequence |
UGUCAGUUUGUCAAAUACCCCA | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 5 |
miR-491 directly targets ABCB1 | [ 43 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay//qRT-PCR//Western blot | ||
miRNA Stemloop ID |
miR-491 | miRNA Mature ID | miR-491-3p | ||
miRNA Sequence |
CUUAUGCAAGAUUCCCUUCUAC | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Human epithelial colorectal adenocarcinoma cell line(Caco-2) | ||||
Epigenetic Phenomenon 6 |
miR-508 directly targets ABCB1 | [ 41 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Immunohistochemistry//In situ hybridization//Luciferase reporter assay//Microarray//qRT-PCR//Western blot | ||
miRNA Stemloop ID |
miR-508 | miRNA Mature ID | miR-508-5p | ||
miRNA Sequence |
UACUCCAGAGGGCGUCACUCAUG | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Multiple cell lines of human | ||||
Epigenetic Phenomenon 7 |
miR-9 directly targets ABCB1 | [ 42 ] | |||
Epigenetic Type |
microRNA | Experiment Method | Luciferase reporter assay | ||
miRNA Stemloop ID |
miR-9 | miRNA Mature ID | miR-9-3p | ||
miRNA Sequence |
AUAAAGCUAGAUAACCGAAAGU | ||||
miRNA Target Type |
Direct | ||||
Experimental Material |
Patient tissue samples, Multiple cell lines of human | ||||
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